Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                -----                    <---------ANAC46                                                        <--------                    <---------ANAC58                                                        ---------                    <---------ANAC58                                                    <-------TEIL                 <---------WOX13(1)                                              <---------AHL20(2)                <---------ANAC58                                                 <-----------GT1=====                <---------ANAC58                                             <---------AHL20(2)------            <---------ANAC58                                                 --------->AHL20(2)------            <---------ANAC58          <---------ANAC46                      <---------AHL20(2) ------          <---------YAB1              ----------->GT1                    --------->AHL20(2)<---------CCA1(2) -------ATHB51 --------->ATHB12    <-----------RAV1(1)                   <---------AHL20(2)<---------GLK1(1)   attatggagttaatgcttgattgcttgtaatatccaaatgttgtatatatgagacatttgatttagtggttttaaaaaattatttacatatacatatcct  20617900                                                   <-------TEIL                                     --------->AHL20(1)                                     <---------AHL20(1)                     --------->HSFB2a(2)                                     --------->ARR11(3)                  <---------DAG2 -------->RAV1(1)         <----------DOF2        <-------MYC3            <----------DOF2 ->ZmHOX2a(1)            ------>ZmHOX2a(2)       ------->MYC2   <---------ARR14(2) -ARR14(2)             --------->ARR11(3)        ------->MYC3   <---------ANAC58 >ARR14(2)             <---------ARR11(3)        <-------MYC2   <---------ANAC58 ===============================HOX2a_HOX2a   <---------ALFIN1  --------->ARR14(2)    --------->ZAT6 --->TOE2(3)<-----------ARR10      --------->AHL20(1)      <---------ANAC46 <---------HSFB2a(2) --->ANAC46<---------GLK1(2)       <---------AHL20(1)------->TEIL     <---------------AGL15 --->TOE1(3)--------->GLK1(2)     --------->AHL20(2)<---------AtLEC2  --------------->AGL15   caacagatttagagattctacccttgatcttttcaaatatatattgacccacatgcatgtactgtggattgtctacttttagaaattgacactatttctt  20618000                                                                                               ------                                                                                             <-------                                                                                      -------->P                                                   <----------ID1                    <-----------GT1                                              --------->YAB1                      --------->ARR11(3)                     --------->At5g28300----------->GT1                           <---------ARR11(3) --------->YAB1 <-----------GT1--------->ZAT2<---------YAB1                      --------->RVE1(1) --------->TOE2(3)  ----------->GT1   ---------->DOF2            <----------DOF2 --------->CCA1(1)   caatcttatcaaactatataaccggtaaaaaccagttggcaaaagttataatatggacaaactatttctttggctgaaaacaaatatctaccatttaaca  20618100                                                                   --------->AHL20(2)                                                             --------->LBD16                                     --------->TOE2(3)      --------->ANAC58                                     <----------DOF2 --------->ANAC46                              --------->AHL20(2)   ----------->RAV1(1)       ---------->DOF2   <------ZmHOX2a(1)      <-----------GT1    <---------AHL20(2)      <---------AHL20(2)----------->GT1  <---------TOE1(3)  --------->ANAC46 --->ZAT6              <---------TOE2(3) <---------TOE2(3)  --------->ANAC58 ----GT1               <---------TOE1(3)---------->DOF2    ------->GAMYB      -------->P  <-------TEIL   ctaactattaaaagactgtgtttttaaggaaaaaaaatactttaaagtttaaaccacataacccgctaataaaatcagacaaccagtttaagtccatttg  20618200                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                                 --------->ZAT6                                                                               <-----------GT1                                                                             <---------YAB1                                                                           --------->ATHB51                                                    <----------DOF2        <--------HAHB4                                        <---------WOX13(1)                 <---------ICU4           *TSS              <------------CBF         <---------GLK1(2)                  --------->ICU4            <            <---------AHL20(2)         <------------CBF                   <---------YAB1          <--            <---------YAB1            --------->ATHB12               --------->ANAC46             ---           <-----------TBP         <---------MYB52(1)                --------->ANAC58             <--    <---------WRKY38(1)      ----------->HVH21      ------>ZmHOX2a(1)--------->ANAC58             ---   atatgctcaacgtttttattgttttcattttctgaccgatagattggctgagtcctttgaaaaaactgtataagccattattaacactcaaatatacaca  20618300        -------->ATHB1        <---------ICU4        --------->YAB1       <---------AHL20(2)                   --------->AtMYB61       --------->ICU4                      <---------ATHB12       <---------YAB1                      <---------MYB55(2)       --------->AHL20(2)                  --------->MYB46(3)       --------->AHL20(1)                 -------->P<---------ETT(2)     --------->YAB1     <---------AHL20(2)------>MYB83 -------TEIL           --------->ICU4     ------>MYB46(1)                                        ---- -----MYC2             <---------ATHB12--------->MYB46(3)                 <------ZmHOX2a(1)   ------- ---->MYC2  <---------ARR11(3)     <---------ATHB12 --------->ETT(2)     ----------->HVH21    ------- -----MYC3  --------->ARR11(3) ------>ZmHOX2a(2)   <---------------------WRI1                 ------- ---->MYC3<---------YAB1--------->AHL20(2)--------->ANAC46       <-----------HVH21    --------->AHL20(2)   cgttcaaaaattattatcttgagcaataaatgatcccatcatccaaccaatacgtcgacactcacagagtcacagaggacagagccatatatatacacga  20618400                     ------->MYC3                     <-------MYC3                    <---------ANAC55(2)                    --------->ANAC55(2)                    --------->O2   ===========================bZIP_DOF   ---------->DOF2  --------->ANAC58                                                        <-------- --->TEIL           --------->ANAC58                                                      --------->YAB1 -->ANAC58          --------->TGA1a         <---------ALFIN1          --------->ANAC58 ------->GAMYB -->ANAC46          <---------O2          ----------->RAV1(1)         --------->ANAC58--------->MYB46(3) -->ANAC58      <------ZmHOX2a(1)        --------->ANAC46     --------->GLK1(1)  --------->YAB1    --   acatacaaagagactagaggacacgtttctatctagagagaacacaacacatcgaaccatggagaaatcaacaagaaccctattcataaccatcgtgata  20618500                                                                                           ------->TEIL                                                                                          <---------SPL1(1)                                                                                          <---------MYB52(1)                                                                                         <---------SPL7                                                                                         <---------SPL1(2)                                                                                         --------->LBD16                                                                                        <---------ANAC58                                                              --------->At4g35610       <---------ANAC46                                                              <---------At4g35610       <---------ANAC58                                                              --------->ZAT2            <---------ANAC55(2)                                                       --------->ANAC58              ----------------                                                       --------->ANAC58         ------->MYC4                                                    <---------SPL7              ------->PIF5                                                    --------->ZAT14             <-------MYC2                                                    <---------ZAT14             <-------PIF5                                                    --------->ZAT18             ------->MYC2                                                   --------->ALFIN1             ------->MYC3                                                  <---------------AtSPL8        <-------MYC3                                       <------ZmHOX2a(1)      <---------ZAT2    <-------MYC4---------                              ================HOX2a_HOX2a ------->TEIL         <---------ANAC46         <---------ANAC58     =========================HOX2a_HOX2a             --------->TGA1a    <-----------RAV1(1)       ------>ZmHOX2a(2)   <---------------AtSPL3       --------->O2--------->SPL7 -YAB1   <---------ANAC58   --------->ARR11(3)   <---------ANAC46              <---------O2<-------TEIL ------->TOE2(3)            <---------ARR11(3)  <------ZmHOX2a(1)              <---------TGA1a      <   acctccatgttgctagggtttggaaactctgatcttgctcaggacagagaggagtgtacgaaccagctcatagaactatccacgtgtattccgtacgttg  20618600     ------>NtERF2    --------->ANAC58    --------->ANAC58    --------->ANAC46                                                                               <-   --------->ATERF1(1)           <---------AtLEC2                                                  <-  <---------ATERF1(1)           --------->ZAT14                                                    -- --------->ARR14(2)             <---------ZAT14                                                    -- <---------ARR14(2)     <---------GLK1(2)                                                      ------ -->SPL14           ---------->DOF2                       --------->DAG2                    --------- >MYB52(2)      ----------->RAV1(1)           ----------->GT1                      <-----------HVH21 ------ZmHOX2a(1) --------->MYB46(3)  --------->ALFIN1 ---------->DOF2  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   gaggagacgccaaggctccaacaaaagattgttgtgcagggtttggccaagttataagaaagagtgagaagtgtgtttgcatattggtcagagacaaaga  20618700   <---------------AGL15      ------->GAMYB                          ------>NtERF2   ------>ZmHOX2a(1)        -------->P                           --------->ANAC58  --------->TOE2(3)     --------->ANAC46                         --------->ANAC46 ------>ZmHOX2a(2)      --------->ANAC58                         --------->ANAC58 --------ARR11(3)       --------->ANAC58             <---------MYB52(1) ------>ZmHOX2a(1) --------ARR14(2)      <---------TOE2(3)  --------->At4g35610   <---------LBD16 ------->ARR11(3)     --------->MYB52(1)  <---------At4g35610  <-----------GT1 ------->ARR14(2)     <-----------GT1--------->At4g35610     <-----------HVH21 --->YAB1        <---------YAB1      <---------At4g35610    <---------CCA1(2) ->DOF2          --------->ICU4     --------->RAP2.6(2) <-----------HVH21  --------->YAB1          <-   tgatcctcaacttggtatcaagattaacgcaaccctagccgctcatcttccctccgcttgtcatatcacggctcctaacatcactgactgtatttgtaag  20618800  Previous    Next  AGI:  At1g55260.1    Description:  lipid binding. similar to lipid transfer protein-related [Arabidopsis thaliana] (TAIR:AT2G44300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22038.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 20618300    to: 20620102    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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