Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ---------DOF2 --->TEIL                                                                     <----------DOF2 -ANAC55(1)                                                                <-----------GT1 >O2                        <---------ICU4                              <---------ARR11(3) -ANAC55(2)          --------->ANAC58                                   --------->ARR11(3) -ANAC58             --------->ANAC58                            <---------AHL20(2) -ANAC46            <-------TEIL                                --------->AHL20(2) >TGA1a             --------->ZAT18                           <---------ARR11(3) -TGA1a             --------->SPL7                            --------->ARR11(3) <---------YAB1 -bZIP60(2)     <---------------AtSPL3                 <---------YAB1   <---------GLK1(2) -ANAC58        --------->DAG2                       <---------ICU4   ----------->ARR10        ------ -O2          ---------->DOF2                        --------->YAB1   <---------TOE2(3)<---------ANAC46   actttgtttctaatccaaaaggtacgctagtcattacaacaatacaacttcttaaacatgataagatttaataagattttcttttcattacgtcgagatt  20610500                             <---------ANAC58                      --------->ANAC55(2)                             <---------ANAC46                      <---------ANAC55(2)             <-                          <-------PIF5                <---------TOE1(2)                     ---------                      <---------ZAT18                ------>ZmHOX2a(1)                    <----------                      --------->ZAT18               --------->TOE1(2)        --------->ATHB12      --            ---------->DOF2  <---------ANAC58       --------->TOE2(2)       <---------MYB52(1)   <--- ------------------>ANAC81------->PIF5        <---------ICU4 --------->AHL20(2)      <----------DOF2   gaaccaaaaacaaacaaagagaattgcacttgcgtctcaatttgtcgataatttcctacgatataaaatacttaattcgttattgggctttttaactcta  20610600                                 <-----------GT1                         --------->ANAC58              <---------TOE2(3) --------AHL20(2)        --------->ANAC46              <---------TOE1(3)          --------->YAB1 >ZAT6                <---------ARR14(2)         <---------ANAC46                --------->AHL20(2) -GT1 <---------TOE2(3)  --------->ANAC58    <XXXXXXXXXXXXXXXXXXXXMIR4228      --------->YAB1 ------->AHL20(2)     --------->ARR14(2)  <---------TOE2(3)                  --------->AHL20(2) ----- --------TBP       ------------>CBF      <-----------GT1                 <---------ANAC55(2)    <----   tttatatttatgtagtttaggcccaatacgccttataacatattaacgatgtcgtttaagggttttctatctgttacataaaaataaaaatcagtcgtct  20610700              --------->GLK1(2)             <---------ARR14(2)             --------->ARR14(2)             --------->ARR11(3)             <---------GLK1(2)             <---------ARR11(3)            --------->HSFC1(2)            <---------HSFC1(2)            --------->HSFB2a(1)    ------>NtERF2----------->GT1            <---------HSFB2a(1)   --------->ANAC46           ----------->ARR10    ------>ZmHOX2a(1)--------->LBD16      <---------LBD16           <---------ATERF1(1)                            --------->ANAC46   --------->ARR11(3)          <---------ALFIN1 <---------ANAC55(2)         --------->ETT(2)  --------->GLK1(1) --------->LBD16--------->LBD16                          <---------ETT(2)  <---------GLK1(1) ------>NtERF2 <---------ALFIN1 ---------->DOF2        <-----------HVH21 ---->HSFB2a(2)    <---------DEAR3(1)    --------->ZAT14            --------->GLK1(2)           ----- -----HSFB2a(2)   <---------LBD16 --------->DEAR3(1)               <---------GLK1(2)     <-----------   agagaaatctcggaagattctccggcgatacctcctccgcctctggactcccgtaaaactcaaattagcgattctctgtcgacgagacaaatattgtgtt  20610800                                      --------->YAB1                                     <------ZmHOX2a(2)                                   --------->YAB1                                   ------->GAMYB                                 ------>MYB83                                 ------>MYB46(1)                                --------->MYB52(1)                               --------->TOE1(2)                               --------->TOE2(2)                        ----------->RAV1(2)                      ------>ZmHOX2a(1)     --------->ATHB12                                    -----                      ======================HOX2a_HOX2a                             --------->GLK1(2)                 <---------GLK1(1)--------->MYB46(3)                       --------->ICU4 <---------ARR14(2) ---->ZAT18     <---------ZAT6--------->DEAR3(2)  <---------TOE1(3)       <---------YAB1  --------->ARR14(2) -CBF      <----------DOF2    --------->MYB46(3)  <---------TOE2(3)  --------->HSFB2a(2) <------ZmHOX2a(1)   cacaagttttcgactttagagttcctgcctgaaccaacgatcatcttgatttagggttttctgtttctcttcgagtattaatggagaatcaggaatcgga  20610900                                                                    <---------DAG2                                                         <---------CCA1(2)                                                       --------->ANAC58                                                       ----------->GT1                                                     <---------ANAC58                                                     <---------ANAC58                  --------->DAG2                                    --------->ARR14(2) --------->ANAC58    --------->ANAC58      <---   --------->At4g35610             <---------MYB52(1)<---------ANAC46      --------->ANAC58      <--- ---->SPL7             <----------DOF2      --------->GLK1(1)    <-----------GT1      ---------->DOF2   cgagccgatgcagaagaagcctcatcttttagactccgtttctccgaattccatggctcgtaactcttcaccttctcaccctatagctaaaagtgtaagc  20611000                                            <---------YAB1                                         --------->ICU4                                     <-------GAMYB                                    <-------GAMYB              --------->GLK1(2)          <---------ANAC58                              <---------TOE2(3)               <---------GLK1(2)           <---------ANAC58 -------DOF2                  <---------TOE1(3)     <---------TOE2(3)                     <---------ANAC46 ------DAG2        <----------DOF2<-------TEIL<---------AHL20(2)                    <-----------HVH21   tttttcgactgtgacttctcgcttctctgtttaaggctcgttgattatgaaattgatgtttttggaatctgtgaatgagttgtctctgtctggcgtttgt  20611100                                                                                                 <---                                                                                                <----                                                                                             <-------                                                                                             <-------       <---------ZAT14                                                                      <--------       --------->ZAT18                                                                <----------DOF2     --------->ZAT18              <------ZmHOX2a(1)               <-------MYC3   --------->GLK1(1)     <---------ZAT18            <---------TOE2(3)                 ------->MYC3   <---------GLK1(1)  -    <---------ANAC46  --------->YAB1                          <-------TEIL <----------DOF2<----------   aatatagtgtgcaatgtctcagaatgatacaaataaggaactatgcaagagtgagtttttttggtacatgtggtttactttggagttccttttttcaggt  20611200                                                                                     --------->ARR14(2)                                                                               --------->ANAC58    --                                                                               --------->ANAC58    <- ----TEIL                                                            <---------TOE1(1)--------->CCA1(2) ----P <---------ZAT14                                               <---------TOE2(1)<------ZmHOX2a(2) --TOE2(3)                                                          --------->SPL7   <---------ARR14(2) --TOE1(3)                   --------->GLK1(2)                    <---------SPL7     --------->ARR11(3) ---RAV1(2)   <---------ZAT6<---------GLK1(2)                  --------->At4g35610   <---------ARR11(3) -------->bZIP60(1)      --------->YAB1                        <---------At4g35610   --------->AGP1-- -GT1  --------->ZAT14 --------->GLK1(2) --------->WOX13(1)    --------->ZAT2---------->DOF2       <-   tgatgccactgttctacagttacagaatcagaaactggttcagcaattagacctgcagaagaaacagctgtacgatgttgaaagcaagatccaagagttg  20611300        ------>MYB83        --------->MYB52(1)        ------>MYB46(1)      ------->GAMYB                                                  <----------DOF2      --------->AtMYB61                                          <---------MYB52(1)     --------->MYB46(3)   ------->TEIL        <----------DOF2<---------At4g35610 ------->ZAT2       --------->ICU4          --------->ZAT2   --------->At4g35610           <---------ICU4 --------At4g35610  <---------YAB1    <---------ZAT14       ------------>AtMYB77 --------->HSFB2a(2) ------->At4g35610--------->YAB1      --------->ZAT14    <-----------HVH21       <---------HSFB2a(2) --------ZAT2    <---------YAB1       <---------ZAT18  --------->MYB59       <----------DOF2       --   cagctcaaccaaacgtcttatgatgatgaacttatatcagtgaaccagctttggaatcaggtcagcagttactttctgtctttatagaacgactaattgc  20611400  Previous    Next  AGI:  At1g55250.1    Description:  HUB2 (HISTONE MONO-UBIQUITINATION 2); protein binding. Identical to E3 ubiquitin-protein ligase BRE1-like 2 (HUB2) [Arabidopsis Thaliana] (GB:Q9C895;GB:Q058L1;GB:Q8LDW7); similar to HUB1 (HISTONE MONO-UBIQUITINATION 1), protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G44950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22034.1); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 20610881    to: 20613370    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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