Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->TOE1(3)                                                                 <---------RAP2.6(2)                                        --------->TOE2(3)        --------->ANAC46                                      <---------ARR11(3)       <-----------GT1                                      ------->TEIL            <---------ARR14(2)                    -                                     <---------CCA1(2)        --------->ARR14(2)                -----      <---------AHL20(1)        <-----------GT1      --------->ALFIN1       --------->TOE2(3)   <----      --------->AHL20(1)      --------->YAB1       --------->ALFIN1     --------->REM1(1)       ----- --MYB46(3)                --------->TOE2(3)   <---------YAB1<----------TaMYB80                ------   gtttttaatatatatgaaaaaactgaaaacattaatactgtatcttagtatcagtgtggaagtatatacggcctacaaccttaattatctaacaaaaaaa  20606100                       ------->TEIL                       --------->ARR14(2)                       <---------ARR14(2)                    --------->ANAC55(2)                    <---------ANAC55(1)                    --------->ANAC55(1)                    <---------ANAC55(2)            <---------ANAC46    <---------TOE2(3)      --------->HSFB2a(2) ---------->GT1    <-------TEIL <---------TOE1(3)      <---------HSFB2a(2) ---->AHL20(1)    --------->CCA1(2)                <---------GLK1(1) -----AHL20(2)   --------->ARR14(2)                --------->GLK1(1)                          ------- ---->AHL20(2)   <---------ARR14(2)            --------->YAB1                --------->ARR11(3) --->AHL20(2)    --------->ARR11(1)   <---------YAB1  <---------LBD16        <---------ARR11(3)   ---   aattgttaagagttttgtagatacgtatttgtttaaagtttttattcactcagaactctggaaatttagaagaaattaagttcttatatttttcaaccag  20606200                                                                                             --------                                                                                            <--------                                                                                            ---------                      <---------AHL20(2)                                                 --------->ATHB12                      --------->AHL20(1)                                                 <---------ICU4                      <---------AHL20(1)                                                <---------YAB1                      --------->AHL20(2)                                                --------->ICU4                     <---------AHL20(2)                          <---------YAB1       <---------ICU4                     --------->AHL20(2)                          <---------AHL20(2)   --------->YAB1              <---------YAB1                    <---------AHL20(2)                   <------ZmHOX2a(2) -->YAB1     --------->AHL20(2)         <-------GAMYB       <---------AHL20(2)<---------AHL20(2) ---- ------>GLK1(1)  <---------YAB1        ----------->GT1----------->GT1      <---------AHL20(2)<-------   aattcaacttaacatttttataaataaattgatatcgtagtcagttatattttatagggtattttatattattgtataaatttatcgatcatgattaaat  20606300                                                            <---------ALFIN1                                                           <---------MYB52(1)                                                           ----------->HVH21              ----------->HVH21                           <-----------HVH21         <<<<<<<<<<WRKY38                                 <-----------TGA1         <<<<<<<<<<WRKY26                                --------->ANAC55(2)         <<<<<<<<<<WRKY43                             --------->ARR14(2)       <------MYB46(1)                                <---------ARR14(2)       <------MYB83<----------CDC5                   --------->WOX13(1)       ----------->GT1                           --------->ANAC58 ->AHL20(2) <---------At4g35610                  --------->ANAC58 -AHL20(2)<---------WRKY38(1)                    --------->ANAC46 >AHL20(2)<---------WRKY12                     <---------ALFIN1   <---------MYB52(1)             <--- ----->AHL20(2)  <---------ANAC46      ------>ZmHOX2a(1) --------->ANAC46  --------->YAB1      <----- --AHL20(2) --------->At4g35610       --------->TOE2(3)  <---------ANAC55(2)            <----------DOF2   tatatcatttggtcaaatgacgcagagccaaatacaaactccttaatccccaagccaatccgtcaccccttacttcatcaaaatcagtgactttgtagga  20606400                                                                                     --------->YAB1                                                                                    <---------YAB1                                                                                  --------->YAB1                                                                                 <---------YAB1                                                                                 --------->ICU4                                                                               --------->YAB1                                                                               <---------ICU4                                                 <----------DOF2            --------->YAB1                                              --------->ARR11(3)       --------->ZAT14             <-                                              <---------ARR11(3)       <---------ZAT18   <---------AHL20(2)                                            --------->ANAC58           --------->ZAT18  --------->AHL20(2)          --------->ARR14(2)                --------->ANAC58           <---------ZAT14*TSS        <--     ---------->DOF2                 --------->ARR14(2)             ---------->DOF2<---------ARR11(3) ------KAN4(2)          <----------DOF2  ------>ZmHOX2a(1)      --------->YAB1<---------ATHB12  ----- -ZmHOX2a(1)       <---------GLK1(2) <---------ARR14(2)       --------->AtLEC2--------->ICU4   ------   attttcaaaaagaatactctagattccttttcaaactcagttcctcaagctctttattaaacccatgcataagagcactaatcatgatcataaaattcct  20606500                                                          --------->TOE1(2)                                                       ----------->RAV1(1)                                                    --------->RAP2.6(2)                --------->LBD16 --------ARR11(3)                                --------->ANAC58                    <---------LBD16 -------CCA1(2)                                  --------->ANAC58             <-----------RAV1(1) ->ZmHOX2a(1)                                   --------->DAG2            <---------PCF2            < --->TOE2(3)                                   ---------->DOF2           ----------->HVH21   <-------   aaatctccctctccctctatatatagacttaaaactatagattaagacataaagccacaacatgggaacacttgtgggacatgttgcaccgggttttgcc  20606600   <---------ZAT18            ----------->RAV1(1)          <---------ALFIN1 ----------DOF2            <-----------GT1     ---------->ID1  <----------DOF2                 <----- ----GT1         <---------ZAT18 --------->TOE2(3)    ------->GAMYB                            ------   ttctttgcacttggtctatggcacttatttaacaacataaaactattttgtctcaacccaaacacctttacttcatcaccatggtttccaacttccaagc  20606700                                                                        --------->ANAC58                             <---------MYB46(3)                         --------->ANAC58--------->WRKY38(1)                      --------->YAB1                                    --------->ANAC46--------->WRKY12                      <---------ICU4                         --------->ATHB12         <----------DOF2 ----ZAT2            <---------YAB1                     --------->ARR11(3)        -------->P --->ZAT2            --------->ICU4  --------->WOX13(1) <---------ARR11(3)    --------->TOE2(3)     <   ttagacatttagagctctacataatcatggtttgttcgtcaatctccatagcctcagagctcttcattggacccaagaaacatcaaccctttgactctga  20606800                            --------------------->WRI1                --------->AtMYB61                                                                   <                <---------ALFIN1                                                                    <             --------->ANAC46                          <---------YAB1                               <     ------>MYB83  --------->AtMYB61--------->ANAC46   --------->ICU4                          ------     ------>MYB46(1)  --------->ANAC46    <---------CCA1(2)       --------->ANAC46           --------   --------->AtMYB61  <---------ALFIN1  ------>ZmHOX2a(1)--------->TOE2(3)                   -------- -----------GT1--------->MYB46(3) --------->ZAT6  --------->bZIP60(2)              --------->ARR11(3)   tggtaccatcccttcaaaccacctccacaactttgaacactcctctatctccatgtcattcttagtctacgcgattttcgcagtagttcttgatcaagaa  20606900                                                                                                -----                                                                                                <----                                                                                             --------                                                                                             <-------                                                                                          ------>NtERF2      <------ZmHOX2a(2)                                                                   --------->ORA47(1)  <------NtERF2                                                                          --------->DEAR3(1) ---------ANAC46                                                                         <---------ETT(2) ---------ANAC58                                                                         <---------ETT(1) ---------ANAC58                             --------->At4g35610      <---------DAG2    --------->DEAR3(2) ---->DOF2                                  xxxxxxxxxxxxxxxx>smallRNA(i)               <---------At4g35610 ->ANAC58                                ------->TEIL       --------->MYB46(3)         --------->At4g35610 ->ANAC58         <---------AtLEC2  <-------GAMYB  <----------DOF2    <----------DOF2  ------>NtERF2   aggcgtagatcaaatatttcgcatggactgactatgctcgttgcatcttctgcctttgctcaacagctcttccttttccatcttcactctgccgaccaca  20607000  Previous    Next  AGI:  At1g55230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63741.1); contains InterPro domain Protein of unknown function DUF716 (InterPro:IPR006904) Range:  from: 20606486    to: 20607591    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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