Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------ANAC58                                <---------ANAC46                --------->HSFB2a(2)                                                       -----------                <---------HSFB2a(2)                                                     ---------->DOF2 ---------MYB46(3) <<<<<<<ZML2  <---------ANAC58                              ----------->GT1   ggctgttcattgtctactctagaaccttgttttggcttatgtataaatttcaacaggttacccttgttttgctagagacatcgtttaaacaaaagtataa  20597800                                                       <---------YAB1                                                     --------->YAB1                                                     -------->ATHB1                                                     <--------HAHB4                                                     --------->ATHB51                                                     <---------ICU4                                                    <---------ATHB51                       --------->ZAT18              --------->ICU4                                ---                       <---------ZAT14              <---------ATHB12                              <--                    <---------ANAC58              --------->WOX13(1)               <-------TEIL <----                    <---------ANAC58           ------->TEIL <---------AtLEC2  --------->ZAT14  ------ >GT1               <---------ANAC46   --------->TOE2(3)  <---------YAB1  <-----------GT1    --------   acacatttactcgaaaacaattgagtgttctaagatgtataccttcatgaaccaattattatgcatgaaaaacattttactgaagtccatttttctcata  20597900                                           --------->YAB1                                           <---------ICU4                                          --------->ICU4                                          <---------ATHB12                                        --------->WOX13(1)   <---------ARR11(3)                  --------->AHL20(2)   --------->ARR11(3)                  <---------AHL20(2)   --------->AHL20(1)               <---------ICU4   <---------AHL20(1)              --------->AHL20(2) ------->TEIL                      <---------ATHB12 ------>ICU4                       <---------ATHB51 -------YAB1                       --------->ICU4 -----ICU4                   --------->ANAC58                  ----------->RAV1(1)       --------->MYB52(1) --->ICU4                    --------->ANAC58      <---------AHL20(2)--------->AHL20(2) ------>ZmHOX2a(1) ->YAB1        <-----------GT1     <---------AHL20(2)          <---------ALFIN1     <-----------GT1 -   atgaatattttttaaaaaaaccttcttcactaagcaaataattaatcatggaataaatggaaaacccacactaaaatagttttttttttcctaacggttc  20598000                                                                        <-----------GT1             --------->ZAT6                <---------ICU4              <-----------GT1           --------->YAB1       <---------HSFB2a(2)                <----------DOF2     --------------        --------->YAB1          --------->HSFB2a(2)               <---------DAG2       <-------------  --------->ANAC58        <---------ARR11(3)                   ------>NtERF2       --------->ZAT14  --------->ANAC58  --------->GLK1(2)     --------->ICU4      --------->DEAR3(1)   <---------ZAT18 --------->DOF2    <---------GLK1(2)      <---------YAB1 --------->MYB52(1)        <---------ZAT14   aacaaagcaagaataatactagattctagctcttatagaagaacataattaagaacgagtaacgacgaccttttttccttcacagtgtacaaaaaataga  20598100                                                                                              -------                                                                                         <---------HSFC1(2)                                                                                         --------->HSFC1(2)                                                                                   <---------ANAC46                                                                                   --------->LBD16                                                                                  <---------LBD16                                                                                  --------->TOE1(2)                                                                   <---------ETT(1)<---------LBD16                                                                   ----------->HVH21     <---------At4g35610                                                                  --------->DEAR3(2)  ---------->DOF2                                                              <---------ETT(1)   ------>ZmHOX2a(2)                                                              ----------->HVH21 <------ZmHOX2a(2)                                                             --------->MYB46(3)--------->ARR14(2)                                                             --------->DEAR3(2)<---------ARR11(3)                                                        --------->MYB46(3)     --------->ARR11(3)                                                        --------->DEAR3(2)     <---------ARR14(2)                             <------------CBF        <---------WRKY18(1)<---------ANAC55(2)   -------                            --------->ATHB12         <-----------GT1    --------->ANAC58 --------->At4g35610   ------>NtERF2           ------>ZmHOX2a(1)        ----------->HVH21   --------->ANAC58--------->ANAC58  --------->DEAR3(1)       <---------YAB1     <---------At4g35610 --------->MYB46(3)--------->LBD16 ->AGL15                ------>ZmHOX2a(1)--------->ANAC58----------->HVH21 ---------->DOF2<---------ALFIN1 --AGL15     <---------MYB52(1)          --------->ANAC58<---------ETT(1)--------->LBD16--------->ANAC58   aacgacgacgttttagttagtctctcctccttattggatagtccagccatctgtttgacccgacccgacccgacccgtaaagatcccgggaagcaccctt  20598200                                                                 --------->ARR14(2)                                                                 --------->ARR11(3)                                                                 <---------ARR14(2)                                                                 --------->GLK1(2)---------->DOF2                          *TSS                                   <---------ARR11(3)               <------ZmHOX2a(2)                     <------NtERF2            --------->YAB1              --------->AGP1 ---------->ID1        <---------ANAC58          <---------YAB1 --------->TOE2(3)     <---------At4g35610         <---------ANAC46  --------->At4g35610 --------->TOE1(3)     --------->At4g35610         <---------ANAC58  <---------At4g35610<-------TEIL -->TOE1(3)   <---------ARR14(2)                   <---------RAP2.6(2)   <---------GLK1(2) -->TOE2(3)   --------->ARR14(2)          <----------DOF2    --------->HSFB2a(2)<---------YAB1<------   aaaccctaaaatgtccgatctagtcatcttcgtcttcttcaactctttcaatggcgtcttcttctaaaatctgcagattatcatcaaagattcattcttt  20598300                                                                                     <---------ARR11(1)                                                                                    <---------CCA1(2)                                                                                   --------->LBD16                                                             <---------At4g35610  --------->ANAC46  -                                    <----------DOF2          --------->At4g35610  --------->ANAC55(2)      --------->At4g35610    --------->GLK1(1)        --------->ARR11(3) <---------At4g35610    <----    <---------GLK1(2)--------->KAN4(1)              <---------AHL20(2)------>ZmHOX2a(1)     ---------   ---------->DOF2  ------->TEIL  ------>ZmHOX2a(1)--------->AHL20(2)--------->TOE2(3)    <---------ATHB12 ----DOF2           <---------KAN4(2) <-----------GT1 <---------ARR11(3)--------->ANAC46--------->WOX13(1)   aacccagaagctcagcaagacgaatgttcacatttcctctttaccctctcccattaaatcttcatctccatcctcagcaacttcccgtatcaatcaatct  20598400                                                <---------ANAC58                                                --------->ALFIN1                                                <---------REM1(1)                                                <---------ANAC46           --------->DAG2                                  --------->HSFB2a(2)                     ---------->DOF2                               <----------DOF2  <---------ANAC58       --------->AHL20(2)           - -------->MYB59               <---------DAG2    <-----------RAV1(1)    --------->YAB1              <- ------DOF2                <-----------GT1   <---------AtMYB61   --------->ANAC55(2)           <----- >WOX13(1)         ---------->DOF2<---------HSFB2a(2)          <-----------GT1           <<<<<<<<<<<<   tttaggtcagttttttttttgcaaaggagtaaccttttggaagtgtattggtgtggccttcagttttacataataaaaaagctggaattagggacattgg  20598500                                                                    <---------YAB1                                                               --------->ATHB12  <---------WOX13(1)           ----------->RAV1(2)            <---------YAB1   ------>ZmHOX2a(1) >>>>>>>>>ARR2                 --------->ZAT2         <-----------GT1         <---------------AGL15 -------->ATHB12               --------->At4g35610  --------->HSFB2a(1)       --------------->AGL15 --------YAB1     <---------GLK1(2) <---------ZAT18 <---------HSFB2a(1)      ----------------->AG ----MYB46(3)  --------->YAB1  <---------At4g35610  --------->HSFC1(2)       <-----------------AGL1 <<<<<LFY     <---------YAB1   <---------ZAT2       <---------HSFC1(2)       ----------------->AGL1   tttgattgtttttgttatcagaaactcaaaatcagctgcgaactcatatttggaattttcgattttgattagaattgattcctaatggggaatggtttga  20598600                                                                                                   --                                                                                                   --             <---------At4g35610                                                          <---------ANAC46             --------->At4g35610           <---------ZAT14                             <---------MYB52(1)         --------->ALFIN1                  <---------REM1(2)                          <---------At4g35610     <---------LBD16                       --------->ZAT14          <---------WOX13(1)--------->At4g35610    --------->MYB52(1)                 --------->ZAT6      --------->At4g35610        <-------GAMYB<- <---------GLK1(2)               <-----------RAV1(1)       <---------At4g35610       <---------MYB46(3)   acagattaccggtggagctaagttgctgtttatcgatgttgccactacacagtgctatagcatctgccagattgatatcaagtttgtctgttgagtctaa  20598700  Previous    Next  AGI:  At1g55205.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13674.1) Range:  from: 20598226    to: 20599701    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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