Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  >>>>>>>>>>>>>>>>>LFY                                              <---------WRKY18(1)                                             ----------->HVH21                                             --------->WRKY45                                             --------->WRKY38(1)                                             --------->WRKY12                                           <-------GAMYB                                          <---------ANAC58                                          <---------ANAC58                                          <---------ANAC46                                     <---------ANAC55(1)                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                --------->At4g35610          <---------ALFIN1           <---------ANAC58                    <---------ARR14(2) <---------RAP2.6(3)                 <---------ANAC58          --------->YAB1           <---------At4g35610 --->CCA1(2)                         <---------ANAC46         <---------ATHB12   --------->YAB1 ---ARR11(3)                       <-----------GT1          --------->WOX13(1) <---------MYB52(1)   <   agccggtctgaaccacatcaaacacttaagcttcaagttacgtttcgttgacccattgtctgcaatcagagggaagaacccgttgataactgctgaatta  20590900                             <---------HSFC1(2)                      --------->CCA1(2)                      --------->ARR14(1)                     --------->ARR11(1)                     <---------GLK1(2)                     --------->ARR14(2)               --------->At4g35610               --------->ZAT14               <---------At4g35610 <---------HSFB2a(2)        ------>ZmHOX2a(2)    --------->HSFB2a(1)                                               ------       <------ZmHOX2a(2)     <---------HSFB2a(1)                                               <-----      --------->ARR14(2)     --------->HSFC1(2)                                              <-------      <---------ARR11(3)    <---------ARR14(2)                                           <-----------HVH21      <---------ARR14(2)    --------->GLK1(2)                                          --------->LBD16      <-----------ARR10     --------->ARR14(2)                            <---------ANAC58   --------      --------->GLK1(2)<-------TEIL--------->LBD16                        <---------ANAC58--------->ALFIN1      --------->ARR11(3)   <---------GLK1(2)                       <---------YAB1    <---------LBD16      <---------AGP1 <---------ARR14(2)                         <---------AtMYB61  --------->ARR14(2)     <------ZmHOX2a(1)--------->GLK1(2)                      ----------->HVH21     <---------ARR14(2)   >>>>>>>GRF7 <---------ZAT14     --------->HSFB2a(2)     <---------ANAC58       ----------->HVH21 -----------HVH21  ----------->ARR10                       <---------ANAC58  <-----------HVH21 ------   gatgtcaggatctgttctgcagagattcggaatcttccgagaacagaacatcgagtcttgagcgtgatggtgatagtcgtgtcagtaaccgggtgagcgc  20591000                                                                                           <---------                                                                                 --------->ANAC58                                                                                 <---------O2        ---------->DOF2                                                          --------->O2    ------>ZmHOX2a(2)                                                            --------->ANAC55(1)   --------->At4g35610                                                           --------->TGA1a   <------ZmHOX2a(2)                                                             --------->ANAC46  --------->GLK1(2)                                                              --------->ANAC58  <---------ARR11(3)                                                             <---------bZIP60(1)  --------->ARR11(3)                                                             ====================  <---------ARR14(2)             <---------ARR14(2)                              <---------ANAC55(2)  --------->ARR14(2)   <---------ARR14(2)                                        <---------TGA1a  <---------AGP1       --------->ARR14(2)                                        ==================== <------ZmHOX2a(1) ----------------->AGL2                                        --------->ANAC55(2) --->ZAT18         ----------------->AGL1                                    <-----------HVH21    <-- ----ZAT14         ----------------->AG <---------ZAT2              --------->ARR11(3)--------->At4g35610 --At4g35610       <-----------------AGL1                          <---------CCA1(2)  <---------At4g35610 ->At4g35610       ----------------->AGL3              ====================================bZIP_DOF-- --->ZAT14    <---------YAB1     --------->ARR14(2)    <----------DOF2--------->YAB1  <---------ZAT2   agaggatctgaaaagtctgattccaaatacggtcgtattctgagcttgttttagcaactttcttcttgtttatcttgatggtcacgtaagctgcttttgg  20591100                                                                <---------YAB1       <---------ARR14(2)                                       --------->At4g35610 -DOF2 --------->ARR14(2)                             <---------ICU4 =bZIP_DOF                                            --------->YAB1 =bZIP_DOF                                           --------->ICU4                                 - --------DOF2                 ---------->DOF2        <---------YAB1                <---------ARR14(2) ------------->AtSPL8  --------->YAB1                <---------ATHB12              --------->ARR14(2)   ctttgtacatatacactgtgaacaaagataacaaaagctcatgaaaatgaacacaatgataacatcatcagagtcactaattcagtatatgatatagact  20591200                                <---------AtLEC2                           <-----------RAV1(1)                  <---------------AtSPL8                           --------->ALFIN1                     --------------->AtSPL8                           <---------REM1(1)                    --------------->AtSPL3                        --------->DAG2                          <---------------AtSPL3                 <------ZmHOX2a(1)                             ---------->DOF2    ---------->DOF2    --------->DAG2                        --------->AtLEC2 -------------->AGL15 ---------->DOF2                 <---------ZAT6                               <-   tacattgaaaggaaatggaggagaaaaaggtgttgcatcgaagattgtaatctctagtgttccatgaaagtacttcttctgttcttcaagctccatcttc  20591300                                                                          --------->WOX13(1)             ------->TEIL                                               ------------>CBF            <---------CCA1(2)                                         ----------->GT1     --------->YAB1                              <-----------HVH21 <---------ZAT2    --------->ZAT18 ---------DOF2  <----------DOF2               <------------CBF     <---------At4g35610         ------   tctttattcaaaatgtatctttaagagaatgagagataattttctgtgaattgtcaagtatgtgtttgaagctggtcaattacagaatgcacaaggttat  20591400                                                                  --------->TOE1(3)                                                                  --------->YAB1                                                                 <<<<<<<<<ARR2                                                                 <<<<<<<<<ARR1                                                             ------------>CBF                                                          --------->AtLEC2                                                        <---------AtLEC2                   ------->TEIL                   --------->ARR14(2)       <---------ARR14(2)                         <---------GLK1(2)       --------->ARR14(2)                         <---------ARR14(2) ---------->DOF2   ----------------->AGL3  <---------TOE2(3)     <------ZmHOX2a(1)--------->TOE2(3) --->MYB59   ------->TEIL  <---------TOE1(3)   <---------TOE1(2)--------->GLK1(2) <-----------GT1   gtccatccatatatgtatatgtatttgttaatgtttttggtgaaacttgtaggattctccatggacaatcttaaagaaaacattcaaccatatagatgac  20591500                                                                          ---------->DOF2                                                                       --------->ANAC58                                 <---------ATHB12                      --------->ANAC58                 <----------DOF2--------->ANAC58                      --------->DAG2           <---------bZIP60(2)  --------->ANAC58            <------ZmHOX2a(1) <---------ZAT6        -           <---------ANAC46  <---------ATHB12    <-----------TBP     ---------->DOF2              ---   aaaatcgaaggtgaagtgtctttgaatacaaatcaagcattcgacttcggtttttaaaaataggaattttaaaaagcaaagtgttagatggtattcaaac  20591600                                                                              ----------->RAV1(1)                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                        --------->ALFIN1                                                                       ------->MYC4                                                                       <-------MYC2                                                                       <-------MYC4                                                                       ------->PIF5                                                                       ------->PIF4                                                                       <-------MYC3                                                                       ------->MYC3                                                                       ------->MYC2                                                                       <-------PIF5                                                                       <-------PIF4                                                                      <---------ANAC46                                                                      ======================bZIP_DOF                                             ----------->GT1          ======================bZIP_DOF                                --------->ARR11(3)                    <---------TGA1a                                <---------ARR11(3)                    --------->TGA1a     <------MYB46(1)            --------->ARR14(2)                    --------->O2                  -     <------MYB83               <---------ARR14(2)               --------->ANAC58                  --   <--------P                  --------->CCA1(1)   <---------AHL20(2) <---------O2          ---------   --------->ALFIN1            --------->RVE1(1)  --------->ICU4 --------->ANAC58        ------>NtERF2 -------->DAG2           ----------->GT1 <---------ANAC46        --------->ANAC46---------->DOF2 <--- ------->DOF2      ---------->DOF2 <-----------RAV1(1)   <---------ANAC46<-------TEIL --------->At4g35610   aaaaggttgggactaaaatgtgaaagcatgaaaatatctggtggagtttgtaaatatttgtggggataagccacgtgcagcaacaaagcgctgccaaaga  20591700                                                                 <---------AHL20(2)                                                                --------->AHL20(2)                                                             --------->AHL20(1)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                     --------->LBD16                                                     ----------->GT1                                                    <---------ANAC46                                                    --------->ATERF1(2)                                                    --------->RAP2.6(2)                               --------->AHL20(2)   --------->LBD16                               --------->YAB1       <---------ATERF1(2)            --------->AHL20(2)      <-----------HVH21        <---------AHL20(2)   --------->HSFB2a(2)            <---------AHL20(2) -------->AtMYB61      <---------ZAT18              <---------HSFB2a(2)      <---------ATHB12       - ------->MYB46(3)      --------->ZAT18             <---------LBD16<-----------GT1 --------->AHL20(2)- ->DOF2    <---------TOE1(2)--------->YAB1 <---------YAB1   --------->AHL20(2)    <---------AHL20(2)- --------GT1     <----------DOF2        --------->ICU4<------NtERF2    ------>ZmHOX2a(1)            -   aaccactcggtcgcagtttctttggtgaactaataatatgaaatttttattctgccggaaaaaaaaattaatccttctaatgaataaaattatgctgttt  20591800  Previous    Next  AGI:  At1g55180.1    Description:  PLDEPSILON (PHOSPHOLIPASE D ALPHA 4); phospholipase D. Identical to Phospholipase D epsilon (PLDEPSILON) [Arabidopsis Thaliana] (GB:Q9C888); similar to PLDALPHA2 (PHOSPHLIPASE D ALPHA 2), phospholipase D [Arabidopsis thaliana] (TAIR:AT1G52570.1); similar to Phospholipase D/Transphosphatidylase; C2 calcium/lipid-binding region, CaLB [Medicago truncatula] (GB:ABN08418.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45717.1); contains InterPro domain Phospholipase D (InterPro:IPR015679); contains InterPro domain Phospholipase D, plant; (InterPro:IPR011402); contains InterPro domain Phospholipase D/Transphosphatidylase; (InterPro: Range:  from: 20588724    to: 20591296    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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