Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ZAT18                                                                                --------->ZAT18                                                                             --------->ALFIN1                                                                           <---------ANAC46                                                                  <---------ARR14(2)                                                                  --------->AGP1<---------ZAT14                                                                  --------->ARR11(3)                                                                  --------->ARR14(2)            <---------ZAT14       <---------ICU4                  <---------ARR11(3)            --------->ZAT14      <---------YAB1                 ----------->ARR10     <------NtERF2             --------->YAB1               <---------ZAT6 <---------ANAC58    <------NtERF2             <---------YAB1            <---------ANAC58   <---------ANAC58        <-    --------->LBD16          --------->ARR11(3)         <---------ANAC46 --------->ZAT14           <-   <---------DEAR3(1)        <---------ARR11(3)         <---------ANAC58 <---------ZAT14           <-  --------->ATERF1(1)       --------->RVE1(1)       <---------ANAC58    --------->ALFIN1          <--  <---------LBD16           --------->CCA1(1)       <---------ANAC58  ------>ZmHOX2a(1)           <-- -------->TCP20         --------->AHL20(2)       --------->ARR14(2) ------>ZmHOX2a(2)            <--- ------RAV1(1)     ----------->RAV1(1)           <---------ARR14(2)<------ZmHOX2a(2)             ----   ttgggccggggctgtccactgcgacataaaatatcatcagtacatagttcaaatccttgcttgtgttagatcctgtggagtgtggactatttggcaaggg  20514800           <---------GLK1(2) --------->SPL7                                        <-----------GT1     --------->MYB46(3) --------RAP2.6(3)                                <------MYB83  <---------WRKY18(1) --------SPL7                                     <------MYB46(1)    <----------DOF2 --------SPL1(2)                              --------->ZAT2   --------->WRKY12 -------ANAC58                                <---------ZAT2   ----------->HVH21<---------ARR11(3) -------ANAC58  <-----------HVH21            --------->ARR11(3)--------->WRKY45 --------->ARR11(3)  - ------------AtSPL3                      --------->At4g35610   --------->WRKY38(1)                  - ----------->AtSPL3                      <---------At4g35610  --------->DOF5.7(2)            <-------   ccgtactgaaatagaatttgtcacaaaaccatttggattttggagcagagcttggttttacatcgttgaccctttcatccactatcttctattggtgtca  20514900                        <---------SPL7                       <---------REM1(1)                      --------------->AtSPL8       <---------ARR11(3)                                         <---------ZAT6       --------->ARR11(3) ------->TEIL                          ----------->GT1 <----------DOF2<----------DOF2                                 <---------ANAC46          <---------TOE2(2) -------->TOE2(3)     <---------------AtSPL8                  --------->ZAT14   <---------TOE2(3) -------->TOE1(3)   <-----------RAV1(1)      --------->YAB1   <---------ZAT14   <---------YAB1 ----HVH21 ------>ZmHOX2a(1)         <---------MYB46(3)    <---------ANAC46     <---------TOE1(3)   <   aacctttaatatcctagtctttttgttgtacccatttgtttgttcattcatataccttgtaatgtgtagtgaaaacagagttatggtttccataggtttt  20515000                                   ---------->DOF2                        ----------->RAV1(1)                        --------->ANAC46                        --------------->AGL15                        <---------------AGL15                                            --------->ANAC58                       <-----------------AGL1                                            --------->ANAC46                     --------->ANAC58                                            --------->TOE2(3)         <---------ZAT6----------------->AGL2                                    <----------DOF2   --------->ATHB12  --------->ANAC46                --------->YAB1            --------->ICU4      <- ---------GLK1(1)    --------->ANAC58       <------ZmHOX2a(1)         <---------MYB52(1) --------->ANAC58   ggaattcattagtgaaaaactataccccacaattggcaaaagactaggaacaaaatcaaaatttgtttctctgtttgtgtcatctttaaacacgctcctt  20515100                                                          --------->AHL20(2)                                                          <---------AHL20(1)                                                         --------->YAB1                                                        <---------YAB1                                                     <---------YAB1                                                   --------------->AGL15                                                  <---------YAB1                                                <-----------GT1                                               <---------YAB1                                             --------->YAB1                              <---------ALFIN1                                             <---------ICU4       <----------DOF2       --------->ZAT14                            ---------->DOF2 <---------YAB1<---------AHL20(2)           <---------ALFIN1               <---------ZAT18           --------->AHL20(2)      <---------DAG2       *TSS   <---------YAB1  <----------DOF2       <---------AHL20(2)<---------YAB1   ---------->DOF2 --------->YAB1--------->ZAT18         <----------DOF2<--------HAHB4      ------>ZmHOX2a(1)  -------- --------WOX13(1)  <---------DAG2  <---------At4g35610--------->YAB1   ---------->ID1 --------->ANAC46   gaatgatgtttctcttgtccacttttgcagaaaagtctgctcttttattattactattattataatgccttttgtcctaaaagacatcaccacacttctc  20515200                                      <---------YAB1                   --------->ARR14(2)                                    --------->YAB1                --------->TOE1(3)                                    <---------ICU4        ------>ZmHOX2a(2)                          <---------AHL20(2)             <------ZmHOX2a(2)                 ----------                        --------->TOE2(3)               --------->ARR14(2)               --------->TOE2(3)                        <----------DOF2                 <---------ARR14(2)   --------->DEAR3(1) <---------GLK1(2)  <----------DOF2--------->ICU4      <------ZmHOX2a(1)    --------->ANAC46    ----- ->ZAT14     <XXXXXXXXXXXXXXXXXXXXXXXMIR163    >>>>>>>>>TBF1      --------->TOE2(3) --------->MYB46(3)   tcacattctctcaagttccaagctttctttaatggcgattatcacagaagaagaagaggatccaaaaaccctaaatccaccgaagaacaaacctaaagac  20515300                                                            <---------------AGL15                                                            --------------->AGL15                                                           <-----------------AGL2                                                           <-----------------AGL3          <---------GLK1(1)                                ----------------->AGL2       --------->ANAC46                                    <-----------------AGL1       --------->ANAC58                                    ----------------->AG       --------->ANAC55(2)                                 <-----------------AG--------->ZAT6   <----------DOF2                            --------->TOE2(3)            <----------DOF2   <---------DAG2                   ---------->DOF2        ----------------->AGL1              ------ >DOF2 --------->ANAC58          --------->TOE2(3)         ----------------->AGL3              ------ ---->GLK1(2)                    --------->TOE1(3)      <----------DOF2    <---------DAG2      ------   tctgactttacgaaatctgaatcaactatgaagaaccctaaaccccaatctcaaaaccctttcccattttggttctactttacagtagtcgtctcactag  20515400                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 --------->ARR14(3)                                                 <---------ARR11(3)                                                 <---------ARR14(3)                                                 --------->ARR14(2)                                                 <---------ARR14(2)    --------->YAB1                               <---------AGP1                       <---------ICU4   <---------ATHB12      --------->ZAT14         --------->AGP1            <---------ARR11(3) --->ANAC46  <---------ARR11(3)                  --------->ARR11(3)     <---------ALFIN1 --->ANAC58  --------->ARR11(3)                  <-----------ARR10      --------->MYB46(3) --->ANAC58 <---------CCA1(2)              <------ZmHOX2a(2)         <---------ALFIN1--------->ICU4   ccacaatcatcttcatatctctctctctgttctcttctcaaaacgatccaagatcttggtttctctcactcccaccagctcttcgtcaacattactcaaa  20515500                  --------->ANAC58                  --------->ANAC46                  --------->ANAC58          ---------->DOF2         --------->YAB1                                                 <-------TEIL        <---------ATHB12                                      <-----------RAV1(2)        <<<<<<<<<ARR2--------->ZAT14                   <---------At4g35610      --------->WOX13(1)                               --------->At4g35610     --------->MYB46(3)                          <----------DOF2   <-------TEIL      <-------GAMYB   tggacgaacaatcaaagtccaagtaaactcaaacgagtcaccaattgaagtctttgtagctgaatcaggttcgattcatacagagactgttgtaatcgtt  20515600                                   -------->HAHB4                                   --------->ATHB12                                  <---------YAB1                                  <---------ATHB12                  ============================RAV               <-------TEIL       --------->ICU4                    <---------ZAT6      <------MYB46(1)         ============================HOX2a_HOX2a      <------MYB83            <------ZmHOX2a(1)               ------>ZmHOX2a(2)      <---------LBD16     --------->MYB46(2)     <---------TOE1(3)                 <-------TEIL          ----------->RAV1(2)     --------->MYB59        <---------TOE2(3)                <------ZmHOX2a(2)    <-----------GT1     <---------AtMYB61 <----------DOF2                      --------->ARR14(2)    <<<<<<<<<GT-1   <---------MYB52(1) <---------ANAC58                      <---------ARR14(2)  <---------WOX13(1)   <<<<<<<<<MYB98 <---------MYB52(1)                  ---------->DOF2         --------->ATHB12  <-----------HVH21   <---------ANAC58             <------ZmHOX2a(2)<-----------RAV1(1)   catgggttaggtctaagttcgtttgcttttaaggaaatgattcaatctcttggatcaaaagggatccatagtgttgctattgatttacctggaaatgggt  20515700  Previous    Next  AGI:  At1g54985.1    Description:  pseudogene, hypothetical protein Range:  from: 20513507    to: 20514829    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g54990.1    Description:  AXR4 (AUXIN RESISTANT 4). Identical to Protein AUXIN RESPONSE 4 (AXR4) [Arabidopsis Thaliana] (GB:Q9FZ33;GB:Q944Q7); similar to unnamed protein product [Vitis vinifera] (GB:CAO17597.1); contains domain PTHR10992:SF20 (PTHR10992:SF20); contains domain PTHR10992 (PTHR10992); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) Range:  from: 20515186    to: 20517348    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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