Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                    --------->HSFB2a(2)                                            <-    --------->ZAT14                 <---------HSFB2a(2)                                           *TSS   ------>ZmHOX2a(1)             --------->ARR11(3)                                             <----  --------------->AtSPL8     ---------->DOF2                           <----------ID1       <------ZmHOX2a(1) ----MYB46(1)             --------->TOE2(3)                         --------->DAG2      --------->DEAR3(1) ----MYB83              <---------ARR11(3)                  --------->GLK1(2)          <------NtERF2 -----RAV1(1)           --------->ARR11(3)   <---------GLK1(2)     ---------->DOF2    ------>NtERF2<-   tggtcctgtactctatttgtttatagtatcttaaaggtctagaattagcttctcttgataagaatttgctaaagtgacaaacacttggcaccgaggaggt  20462300                                                 --------->AtLEC2                                             <-----------HVH21                                           ------->MYC3                                           <-------MYC2                                           ------->MYC2                                          <---------ANAC58                                          <---------TGA1a                                          --------->ANAC55(2)                                          --------->O2                                          <---------ANAC58                                          <---------O2                                          <---------ANAC55(2)                                       <---------REM1(2)                                      <-----------------PIF3(1)                                --------->ARR14(2)         ---------->DOF2    <---------ZAT18<-------MYC3                                  <-----------TBP         ===========================================bZIP_DOF                    <---------AHL20(1) --------ANAC46  <---------O2   <---------ARR14(2)                             --------->AHL20(2) --------ANAC58  --------->O2 ------->TEIL--------->TGA1a                  --------->AHL20(2) <------ -----ARR14(2)   <---------ANAC46     <-----------HVH21      ----------->RAV1(1)--------->AHL20(1) --------ANAC58  <---------bZIP60(2)------>ZmHOX2a(1)--------->AtLEC2  ----------->GT1  ------->TEIL   ttcgttttgccaaaagacgacgtgtattaatgcacatcctcttcacgtgtcatgcatgcacaacaacaaattcgagttaaaatatatatgtatatataca  20462400                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                                                                          <---------AHL20(2)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                 --------->AHL20(2)                                                            --------->AHL20(2)                                                            <---------AHL20(1)                                                            --------->AHL20(1)                             <---------TOE2(3)              <---------AHL20(2)                 <---------AHL20(2)                        <---------AHL20(2) <---------TOE1(3)           <---------TOE1(3)             --------->AHL20(2) <---------TOE2(3)     <---------------AGL15       ----------->GT1<---------YAB1 -TEIL          <---------AHL20(2)            --------->AHL20(2) <---------AHL20(2) --------->MYB52(1)   tataaggtatagtttttttttattttcatataaggtatagttatccgattatatagtaaaattaaattttaattaataaatcttcttaacgaagaaattt  20462500                                                                            ------->TEIL                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                           <---------CCA1(2)                                                                        ------->MYC4                                                                        <-------MYC4                                                                        ------->MYC2                                                                        <-------MYC2                                                                       --------->ANAC55(2)                                                                       --------->TGA1a                                                  <---------ARR14(2)   <---------ANAC55(2)                                         <------ZmHOX2a(2)             --------->O2                                     --------->ANAC58                  <---------O2                                     <---------ANAC55(2)             <---------ALFIN1                                     --------->ANAC58               =============MYC_MYB                                     --------->ANAC55(1)      --------->WRKY12              <--------                                     --------->ANAC55(2)     --------->DOF5.7(2)           --------->bZIP60(2)                                     --------->ANAC46       <-------MYC3<-------MYC3 ----------->HVH21                                    <---------LBD16         ------->MYC3------->MYC3 <---------ETT(1)                    <---------YAB1<---------SPL7  <-----------ARR10 ------>MYB46(1)  --------->DEAR3(1)           <------ZmHOX2a(1)   <-----------HVH21  --------->ARR14(2)------>MYB83   ------>ZmHOX2a(1)           =====================================HOX2a_HOX2a--------->O2<---------TGA1a------>NtERF2      ----------->HVH21       --------->bZIP60(2) --------->GLK1(2) -------->P  ------>ZmHOX2a(1)   gtcagtgtgtgaaggagacattgtgtttgtccatgtcatacggatcaccacaaatctggccacgtttaccaacacgtgtatcctcctccgaccatgtcat  20462600                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     <---------ARR14(2)                     <---------GLK1(2)                     --------->ARR14(2)                     --------->ARR11(3)                     <---------ARR11(3)                <-----------HVH21               --------->TGA1a              ------->MYC3              <-------MYC3             <---------ALFIN1             --------->TGA1a          <------------CBF             --------->O2           --------->AHL20(1)             <---------O2           --------->ARR11(3)                                          <----           ----------->RAV1(1)      <---------AHL20(1)                                          <----         ------>MYB83--------->AGP1--------->CCA1(2)                                            -----         <-----------HVH21        --------->ARR11(3)                                         <-------        --------->ANAC46          <---------ARR11(3)                                        >>>>>>>>>TAC1      ----------->RAV1(2) <---------TOE2(2)                                              <---------ANAC46      =================RAV<---------TOE1(2)                                <---------YAB1<---------ANAC58  ------>ZmHOX2a(1) --------->At4g35610                                  *TSS            <---------ANAC58  ============================HOX2a_HOX2a                         <---------ARR14(2)  <---------ANAC46  ===========================HOX2a_HOX2a                     <---------ANAC46       <---------ANAC46 --------->TOE2(3)  <---------At4g35610                      ----------->GT1  ------->TEIL <---------ANAC46 ---HVH21------>MYB46(1) ------>ZmHOX2a(1)     ------------>CBF  ----------->TBP <-----------RAV1(1)   gttcctcaacctgccacatgtcagatcctatgttgagatatattgctacttcaatgtagcatgttgtatatatggccatgaatgtgttgtgtcgagtgtt  20462700                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                 ====                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                -----                             <---------ANAC55(2)                                                <----                             <---------ANAC58                                                   -----                             <---------ANAC58                 --------->ANAC58                 ------ -----ZAT14                  --------->ANAC55(2)              --------->ANAC46         <---------GLK1(2) -----ZAT18               <---------MYB52(1)                  --------->ANAC58---------->DOF2 <------ ---->ZAT18      --------->YAB1                      <---------ATHB12         ======================= --ZAT6         <---------YAB1                      --------->ANAC46--------->TOE2(3)----------->ARR10   cacttcgtcaagagtcttatcatcaaacgttacgttctcgttttctcaaattccaaacaataccaagaaacctctacttgaaaagagaagattatcgccg  20462800 --------->ALFIN1 <---------ANAC58 <---------ANAC58 ------->ALFIN1 -----MYC3 ---->MYC3 ===================bZIP_DOF ----->O2 ------O2 ----->TGA1a ------ANAC58 ------TGA1a ------ANAC46 ------ANAC58        <------NtERF2 ---->LBD16        <---------ANAC58 --NtERF2          <---------ANAC46 ->NtERF2          <---------RAP2.6(2)                ---------->DOF2         --------->ZAT18 --->DEAR3(1)      <---------ANAC58             ----------->RAV1(2)        --------->ANAC58      <--- ---LBD16---------->DOF2                      <---------ALFIN1             --------->ANAC58     ----- ======bZIP_DOF <---------DEAR3(1)       --------->AtLEC2      <-----------HVH21                <----   cgtgtgtgcctaagagcgatggcgtctgagaaacaaaaacaacatgcacaacctggcaaagaacatgtcatggaatcaagcccacaattctctagctcag  20462900        ------>MYB46(1)        ------>MYB83     --------->HSFB2a(1)     --------->HSFC1(2)                                                         <---------ANAC55(2)     <---------HSFB2a(1)                                                        <---------ANAC58     <---------HSFC1(2)                                                         <---------ANAC58    -------->P              <---------AHL20(2)                           --------->ARR11(3)    ------>MYB46(1) <---------ANAC58                             <---------ICU4 --------->ANAC55(2)    ------>MYB83--------->HSFC1(2)                            <---------ANAC55(2)  <---------MYB59  <-------TEIL                               --------->ANAC55(2)  ------->TEIL  <---------MYB111(1)       --------->AHL20(2)           <---------ICU4  <---------ARR11(1)        <-  --------->MYB46(3)<---------ANAC46    <---------MYB52(1)  <-----------GT1     --------->ANAC46   --  <---------MYB46(2)<---------ANAC58   <----------DOF2  <---------ARR11(3)     --------------->AtSPL8  <---------MYB111(2)      --------->ICU4               <---------AHL20(1)     --------------->AtSPL3 ------GLK1(2)  <---------HSFC1(2)    --------->TOE2(3) --------->AHL20(2)  <----------DOF2        <- ---->At4g35610--------->ANAC58    <-----------GT1      --------->AHL20(1) <---------ICU4          <- -----At4g35610--------->ANAC58 --------->YAB1     <------ZmHOX2a(2)    <---------CCA1(2) <-------TEIL   attaccaaccttccaacaagcttcgtgtaattttttataacctttagtttgagatcaaaatattacataatttcaaatctttacgtaccatattcatttt  20463000                                                                                             --------                                                                                             <-------                                                                                            <------ZmHOX2a(1)               --------->ARR14(2)                                                         <---------TOE2(3)    --------->ANAC58                                                               --------->AHL20(1)    --------->ANAC58                                                              <---------ICU4    --------->ANAC55(2)                                                           --------->ATHB51    <---------ANAC55(2)                    <---------ARR11(3)                     <---------AHL20(2)    ----------->GT1                        --------->ARR11(3)       --------->ANAC46    ---------->DOF2 --------HSFB2a(2)              <---------AHL20(2)                  --------->ANAC58  <---------AHL20(2) ------->HSFB2a(2)             --------->ARR11(3)                   --------->ANAC58<---------YAB1  - --------------AtSPL3          <---------AHL20(1)                 <-----------GT1 --------->AHL20(2)< --------------AtSPL8          <---------ARR11(3)    ------>ZmHOX2a(2)           --------->ICU4   <--   tcgagtacgtaaatttgtatatgcatattggtatatatttcataagataatttgatctcaattcaaattcactcaattagctaattattttaaaggattt  20463100                                                                                          <---------ARR14(2)                                                <-------GAMYB                         --------->ALFIN1                                                ==============================================MYC_MYB                                               <---------ANAC46                      --------->LBD16                                               <---------ANAC58                     <---------ANAC58                                               <---------ANAC58                     <---------TGA1a   --------->AHL20(2)                         <------NtERF2                         <---------ANAC58   <---------AHL20(2)                       --------->ALFIN1                        ================= ->ARR14(2)                              <---------AtMYB61                 <---------AtMYB61 --ARR14(2)  <----------DOF2             --------->DAG2     <---------ANAC46<------MYB83  --------->ARR14(2) -------->ARR11(3)             --------->WOX13(1)        <-----------RAV1(1)<------MYB46(1) ---------ARR11(3)         ----------->GT1  <---------DEAR3(1)      <---------LBD16 <---------O2 -------TOE2(3)           ------->TEIL <--------P  --------->YAB1 --------->GLK1(2) <---------ANAC46   gagattttaatatttctttaacaacatggatgtaaatcagggtaaggtggcgttgataactggtggagactctgggattggtcgagccgtgggatactgt  20463200  Previous    Next  AGI:  At1g54860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19250.1); similar to GPI-anchored protein-like protein II [Cucumis melo] (GB:ABR67421.1) Range:  from: 20461088    to: 20462298    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g54870.1    Description:  oxidoreductase. Identical to Glucose and ribitol dehydrogenase homolog 1 [Arabidopsis Thaliana] (GB:Q9FZ42;GB:Q42157;GB:Q42225;GB:Q9C7L3); similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G05260.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABD32398.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 20462673    to: 20464314    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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