Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <----------DOF2                      <---------ANAC58                      <---------ANAC58                   <---------WOX13(1)                <---------YAB1              --------->At4g35610                                        --------->YAB1              <---------At4g35610                                       <---------ATHB12           ---------->DOF2                                              <---------YAB1     ------->TEIL--------->ATHB12           --------->TOE2(3)         ------>ZmHOX2a(1)           ---   acgcttgaatctgaaaagctgattgctttggacgatgatgttgttttcttaaatctggtccaaagtaagttcctatgatgaaatgtaagagaaacaactt  20457500                                                                           ------>ZmHOX2a(2)        -                                                                           ==========================                                                                         --------->ARR11(3)        --                                                                         <---------ARR11(3)        --                                                                       --------->ANAC58         -----                      <-----------GT1                                  --------->ANAC58         <----                --------->YAB1                               --------->MYB52(1)                ------                --------->AHL20(2)                           ---------->DOF2                   <-----         <---------ARR11(3)  <----------DOF2           <---------At4g35610<------ZmHOX2a(2)  -------- ------->ID1   <---------ATHB12                        --------->At4g35610===========================   gtcttcttcaatatccaatgaaattaacacactttcttcttgttcttgagagttttcagctactaaaggagacacgatctcaggcattgtatcactcata  20457600         ----------->RAV1(1)      --------->ANAC58      --------->ANAC46      --------->ANAC58 ----->ZmHOX2a(1) ======HOX2a_HOX2a ------->TOE2(3) ------->TOE1(3) ---->ARR14(2) -----ARR14(2) --->GLK1(1)     --------->TOE2(3)                                                                  - ----CCA1(2) --------->ANAC46                                   <----------DOF2               ------- ->YAB1 --------->ANAC46             <---------YAB1             --------->TOE2(3)             ------- ======HOX2a_HOX2a               <----------DOF2    ---------->DOF2                           -------   tcctaaacacacaacacaacatcaaaagtttgattctttatgagtgtttatacaaaaagattgaaactttaatagaaaatttgaaaaatactggacatgc  20457700                                                       ----------->GT1                   ----------->GT1                    --------->ALFIN1        <------ZmHOX2a(1)               ------>MYB83                         <---------ANAC58        <---------TOE1(3)             <---------MYB59                        <---------ANAC58  <---------------AGL15            ----------------->AG             --------->YAB1     --------->ANAC58       --------->YAB1                   <---------ANAC58        --------->ANAC46        --------->ARR11(3)      --------->ICU4                    --------->ANAC55(2)     --------->ANAC58      <---------TOE2(3) -------->YAB1 ------>MYB46(1)          <---------ANAC46       <---------------------WRI1  ---------- -->ANAC58  ----------------->AGL1      <---------ANAC58----------->GT1     <---------TOE2(3) -->AtLEC2  ==========================================================================MADS_MADS -->ANAC58<-----------GT1               <---------ANAC55(2)   --------->MYB52(1)  --------->CCA1(2)   aataagaaattataaccaaattggataaaaattggacacatttcgtatcaaaatgggtgggaaaaaacgaaactttttaaggagatttaagaaattgaag  20457800                                                                                ---------------------                                                         <------ZmHOX2a(1)    <---------At4g35610                                        --------->AHL20(2)  <---------ZAT6 <---------At4g35610                                    <---------TOE2(3) <-----------RAV1(2) <---------MYB46(3)                            --------->ANAC58          <---------LBD16    <--------P                            --------->ANAC46        -------->P          <-------GAMYB        <-------                            --------->ANAC58     <---------MYB52(2)   <---------TOE1(3)     =========       --------->YAB1     --------->MYB52(1)   <-----------GT1        <---------TOE2(3)     <-------GAMYB -------------->ANAC81  <---------AHL20(2)  ----------->GT1 ----------->GT1--------->At4g35610   caaatagaaacataatttgttgataaataaacgaaattgagataaaatgttactaaccaggagtgtaaatttagggttgctgcttagtgaatttcgttgt  20457900                                                                                                 <---                                                                                              -------                                                                                             <-------MYC4                                                                                             ------->MYC3                                                                                             <-------MYC2                                                                                             ------->MYC2                                                                                             <-------PIF5                                                                                             ------->PIF5                                                                                             ------->MYC4                                                                                             <-------MYC3                                                                                            =========                                                                                            ---------                                                                                            ---------                                                                                            <--------                      <---------O2                                                          >>>>>>>>>                --------->DAG2                                                              ---------   --------->At4g35610--------->O2                                                          <--------   <---------At4g35610<---------ANAC46                                                      --------- --------->YAB1 *TSS  <---------TGA1a                        --------->ICU4                 <-------- >WRI1         =================bZIP_DOF                 --------->At5g28300            <------------ --MYB52(1)    ---------->DOF2         --------->ANAC58 ----------->GT1           --------->ATHB12 ===============================MYC_MYB--------->ANAC58----------->GT1           --------->ICU4 <----   ctctcatcagagaaacagaaagcgacttgggaaaaaaactcaagacatggcaagaagagggtaaaaatggtattctttcggcactgatttgtccacgtgg  20458000                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                --------->DEAR3(1)                                                                               --------->ATERF1(1)   <-----------GT1                                                             <------NtERF2 ------ANAC46                                                                  --------->RAP2.3(1) -->ALFIN1                                                                    ------>NtERF2 ==============================bZIP_DOF                                       <---------ATERF1(1) >PIF3(3)                                                                     --------->LBD16 >ANAC46                                                             <---------ARR11(3) -PIF3(3)                                                      <---------LBD16<---------RAP2.3(1) >HY5                                                          <---------HSFB2a(2) >O2                                                       <---------GLK1(2) <---------DEAR3(1) -O2           --------------->AGL15                      --------->HSFC1(2) --------->ATERF1(2) >TGA1a ------>MYB83---------->DOF2                       <---------HSFC1(2) <---------ATERF1(2) -TGA1a ------>MYB46(1)                                 *TSS   --------->HSFB2a(2)     <---------HSFB2a(2) ----PIF3(2) ------->TEIL                              ---------->DOF2      <---------LBD16        <- --NtERF2    <-------TEIL                     --------->AHL20(2)     --------->ARR11(3)--------->HSFB2a(2)   cgattataccaaatgtacatcttaaagaaaattaagagaaaaaaaaaaaaaaatcaacaaagcttctcggagatttttgccggcgacttctgaaacatcg  20458100            ----------->GT1           --------->DAG2          ---------->DOF2                                                                           -       ----------->GT1                    <---------MYB52(1)                                      <--      <---------TOE2(3)               <---------MYB52(1)                                <---------ANAC58 ----------------AGL1              <-------TEIL <-----------GT1     <-----------GT1     <---------ANAC58   tctccgatgaggtaaagtaactaatttttctcaaaaattcgtcagttttgtttctactcttgctcttatataacccaagtttgtgtattttcgtttgatt  20458200                                                            <---------DAG2         <---------AHL20(2)                           <------MYB46(1)         --------->AHL20(2)                           <------MYB83        --------->AHL20(2)                   <---------WOX13(1)      <---------ARR11(3)    --------------->AtSPL8   --------->MYB59                             <---      --------->ARR11(3)    <---------------AtSPL8   <---------TOE2(3)                       <------- ---------->HVH21 <----------DOF2          --------->ATHB12 <----------DOF2      <----------DOF2 <--- -------ANAC46 <-----------GT1         <-----------GT1----------->GT1---------->DOF2         <-------   ctgtgaaagatttaatttttctttatgggttttgtacattttcactgattgaaattaggttacttttggctaaaagtctgaaactttgatgaaatacttg  20458300                                                                                          <----------                                                                                        --------->MYB59                                                        <---------ICU4            <---------------AGL15                                                        --------->YAB1           ----------------->AGL1  <---------MYB59                                      <-------TEIL              <-----------------AGL1 ------ANAC58            --------->TOE2(3)         <---------AHL20(2)            ----------------->AG --ANAC58      <---------TOE1(3)                  --------->YAB1             <---------ANAC46       < ------ANAC58  <---------TOE2(3)             ----------->GT1 <---------ANAC58<---------ANAC58       = --ANAC58   <-----------GT1              <---------TOE2(3)   <---------ANAC58<---------ANAC58       -   tgtgccaaacttattttcaggtttaaaacttaaacttatgtctaagatagtataatattcattacttggctaaacccttgcttacaaaattgggtcagac  20458400  Previous    Next  AGI:  At1g54840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54850.1); similar to heat shock protein-like protein [Cucumis melo] (GB:AAO45755.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 20456260    to: 20457916    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g54850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54840.1); similar to heat shock protein-like protein [Cucumis melo] (GB:AAO45756.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 20458056    to: 20459887    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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