Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------MYB52(1)                          <---------LBD16     ----------->GT1                               ---------                        <-----------GT1       --------->ANAC55(2)                         <---------MYB52(2)                      <---------ICU4          <---------ANAC55(2)             --------->LBD16                <------ZmHOX2a(1)  ----------->HVH21                         <---------HSFC1(1)    --               ----------->GT1 <---------MYB46(3)         <-------TEIL       --------->HSFB2a(2)   --          <------ZmHOX2a(1) --------->LBD16  --------->MYB59   ------->GAMYB <---------HSFB2a(2) ----   ccaattcgaagaggaataggataatttttccggtgattcgaccgagttaagtaaaataggttcaacagagcctaaaattccagaaaacgaaaactaactt  20406300                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                           --------->CCA1(2)                                                                                          <---------AGP1               <-----------GT1                                                            --------->AGP1            <---------ICU4                                                                <---------ARR11(3)           --------->AHL20(2)                                                             --------->ARR11(3)           <---------AHL20(2)                                                  --------->TOE1(2)    --------->AtLEC2                                                         --------->GLK1(2) >MYB52(1) --------->AHL20(1)                                                --------->ARR14(2) ------->TOE1(3)    <------ZmHOX2a(1)                           --------->CCA1(2)         --------->ARR14(2) ------->TOE2(3)   <----------ID1                        <---------YAB1      <---------ARR14(2) ---->P   --------->AHL20(2)  --------->AHL20(2)      <------ZmHOX2a(2)     <---------GLK1(2)   acctcaatgcaaaaaaattacaggacaaaaaatgaattacagagcaatttcaacagatcaatatagagatgagaaaacgattctgcgaattagatctaca  20406400                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                          --------->AGP1                                          <---------ARR14(2)                                          --------->ARR11(3)                                          <---------AGP1                                          --------->ARR14(2)                                        <                                         <---------CCA1(2)         --------->ANAC46                --          >>>>>>>>>TBF1               <------ZmHOX2a(2)            --------->ANAC58                --       >>>>>>>>>TBF1                --------->At4g35610            <----------ID1                 ---    >>>>>>>>>TBF1               ------->TEIL------>ZmHOX2a(2)      --------->ANAC58    ---------->DOF2   gttgaagaagaagaagaacaactaggtcgagatgaatcagatcagatctatagcaaaatgggagaaatcacgacaaaaattcagtaagaaaaagatgaga  20406500                                          --------->ZAT2                                          <---------ZAT2                              --------->WRKY12 -------TEIL                  ----------->HVH21 ------->CCA1(2)            --------->At4g35610                              --------->ANAC58 ------->GLK1(2)        <-----------------------TaNAC69(2)                   --------->ANAC58 ------>ARR11(1)---------->DOF2      <------ZmHOX2a(1)      --------->At4g35610              ------->TEIL   gattcgagggaagaagagaaaagagagaccagttgacgaggacgagcttggagagaagtagaagcagaagtagcaatggaagccatagaagaatgaatcg  20406600                                <----------ID1                            <------NtERF2                           --------->LBD16                          <---------ANAC46                          <---------DEAR3(1)                         <---------------------WRI1                         --------->ATERF1(1)                         <------NtERF2                       ------------------------>ANAC81                       --------->ALFIN1                      --------->ATERF1(1)                 ------>ZmHOX2a(2)                                                                  <                =============HOX2a_HOX2a                                                <---------AHL20(2)                <------ZmHOX2a(2)   ---------->DOF2                                    <---------AHL20(2)      ------>ZmHOX2a(2)<---------DEAR3(1)                           --------->ALFIN1   --------->AHL20(2)      =======================HOX2a_HOX2a                     --------->GLK1(2)     --------->AHL20(2)     ========================HOX2a_HOX2a                --------->ZAT14            <---------AHL20(2)     <------ZmHOX2a(2)<------ZmHOX2a(1)                 <---------ZAT14        <---------YAB1     <--   tagagagatcggagtgagatcggaggaggcggagaagacaaagagatgtgagacacagtgaagaatccaagtgggagacttatttttaattttatagtat  20406700                                                                            <---------ANAC58                                                                            <------MYB46(1)                                                                            <------MYB83                                                                            <---------ANAC58                                                                            ----------->GT1                                                                           <---------DEAR3(1)                                                                           --------->MYB55(2)                                                                           --------->MYB111(2)                                                                           <---------MYB46(3)                                                                          <---------MYB55(1)                                                                          --------->ALFIN1                                                                        <---------TGA1a                                                                        <---------O2                                                                        <---------bZIP60(2)                                                                        =============================                                                                        <---------ZAT2                                                                        <---------ANAC46                                                                       --------->ALFIN1                                                                       <---------AtMYB61                                                                     --------->ALFIN1                                                                    <-----------HVH21                                                                   ==================================                                                                   <---------TGA1a                                                                   <---------ZAT2                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                   <---------ANAC55(2)                                                                   <---------O2                                                                   --------->O2        *TSS                                                       --------->TGA1a                 --   --------->TOE2(3)                                               --------->ZAT2           <--------   <---------MYB59                                               <-----------RAV1(2)       <-------TEIL   --------->TOE1(3)                  ------------>CBF         <-----------HVH21        --------->At4g35610 -----------GT1                     --------->GLK1(2)         --------->ANAC58          <---------At4g35610 -------AHL20(2)          <----------DOF2 <---------ATHB12    --------->ANAC58 --------->ATHB12 <----   tttaacctaaacaaaaaaaaaaaaaaaacttttctgagattccaatgagagaattcagacagacaagtcaggtgaggtgggtgatttggcagatgcaggt  20406800                                                                                                -----          <---------ARR14(2)                                                                   <-----          --------->ARR14(2)                                                                  -------      <-----------------AG                                                                    -------     <-----------GT1                                                                   --------->HSFB2a(2) ====MYC_MYB                                              --------->AHL20(2)       <---------ZAT14 ====MYC_MYB        --------->AHL20(2)              ----------->GT1                --------->ZAT14  < --------->GT1----------->GT1                   ---------->DOF2             <---------YAB1    <------ ---RAV1(2) <---------LBD16    --------->ARR11(3)--------->DAG2           --------->YAB1     -------- ----P<-----------------AGL1  --------->YAB1 --------->TOE2(3)         --------->WOX13(1)   ---------   agagaaataacaaattcggaaaaaaaatccaaacatattgttttttttcttaaagcgaaataaaacaattagtcaattacgatagtttactggaattata  20406900                                                   --------->TOE1(2)                                                   --------->TOE2(2)                                                  --------->ANAC58 ---->YAB1                                       <---------TOE2(3) ----YAB1                                   --------->YAB1 -->AHL20(1)                        --------->ANAC58 -->AHL20(2)                        --------->ANAC46                                         <------- -----------GT1          <---------YAB1    <---------ATHB12                      --------->TOE1(3) ---AHL20(2)   <----------DOF2      --------->ANAC58           <-----------GT1   --------->TOE2(3) ->YAB1        <---------DAG2     --------->ANAC46--------->ANAC58       <-----------GT1    --------- >ICU4      <-----------GT1      --------->TOE1(2)--------->ANAC46 ----------->GT1  ---------->DOF2--   ataaacaaccttcttaactttttttttatgaaaaacacacgataaatcataaacgtaagaaaaattaacatgttatttctataccttaaaacaaattaat  20407000                                                              -------->P   ----------->GT1                                                              ------>MYB46(1)                                                              ------>MYB83 --------->YAB1                         <-----------GT1              <---------ICU4  <---------YAB1     --------->YAB1   <---------ICU4         <---------HSFC1(2)   ------>MYB46(1)  <----------DOF2  ------>MYB46(1)           <---------HSFB2a(1)  ------>MYB83              <-------- --AHL20(2)        ------>MYB83              --------->HSFB2a(1)<---------MYB59          ----------->GT1 >AHL20(2)       <---------MYB59             --------->HSFC1(2)<-----------------AGL3<---------YAB1 ----->TEIL   <-----------GT1               <---------KAN4(2)------>ZmHOX2a(1)  --------->ICU4     <-   gcatctttcatattttttaccaaatttttacaactattttgtagggaattttctactaatttcctaccaaatatgaatagtaaaaatttgatagtaaatt  20407100                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                   <x                                                                                                   <x                                                                                                   xx                                                                                                  xxx                                                                                                  ---                                                                                                 xxxx                                                                                                 xxxx                                                                                                xxxxx                                                                                                <xxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                               ------                                                                                               <xxxxx                                                                                              xxxxxxx                                                                                              -------                                                                                              xxxxxxx                                                                                           xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                  xxxxxxxxxxxxxxxxxxx                                                                          <---------At5g28300 <xxxxxx                          <------ZmHOX2a(1)                          <---------MYB46(3)xxxxxxxxxxxxxx                     --------->ATHB12                              --------->At5g28300xxxxxxxxxxxxxxx                     -------->HAHB4                            <---------DOF5.7(2)xxxxxxxxxxxxxxxxxxx                     --------->YAB1                            --------->MYB52(1) xxxxxxxxxxxxxxxxxxx         <---------AHL20(1)                                 --------->At4g35610  <---------YAB1<xxxxx         --------->AHL20(2)                                 <---------At4g35610  <xxxxxxxxxxxxxxxxxxx         <---------AHL20(2)                                <---------TOE1(3)   xxxxxxxxxxxxxxxxxxxxxx  <-----------GT1   <---------YAB1                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxx -AHL20(2)<---------AHL20(2)                         <---------ARR11(3)  <-----------GT1xxxxxxxxxxxxx ---------DOF2      --------->ICU4                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxx   tcttttaccaattttttttgtaatgataggattaatatgttccaaacaaatgctagatgttaagctaacggtgattcaccgctataaatgctaagcgaac  20407200  Previous    Next  AGI:  At1g54630.1    Description:  ACP3 (ACYL CARRIER PROTEIN 3). Identical to Acyl carrier protein 3, chloroplast precursor (ACL1.3) [Arabidopsis Thaliana] (GB:P25702;GB:Q9ZVM7); similar to ACP2 (ACYL CARRIER PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT1G54580.1); similar to Acyl carrier protein, chloroplast precursor (ACP) (ACP09) (Clone 22C01) (GB:P17650); contains InterPro domain Phosphopantetheine attachment site; (InterPro:IPR006162); contains InterPro domain Acyl carrier protein-like (InterPro:IPR009081); contains InterPro domain Acyl carrier protein (ACP); (InterPro:IPR003231); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) Range:  from: 20405065    to: 20406708    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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