Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------ALFIN1                                                                                        --------->ANAC46                                                                                       --------->MYB46(3)                                                                                       <---------MYB55(2)                                                                                      --------->ANAC46                                                                                  --------->SPL7                                                                                <---------SPL7                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                              --------------->AtSPL3                                                                              ---------->ID1    -----     ----------->RAV1(1)                                                      --------------->AtSPL8 --------->DOF2      <-------TEIL                                         <---------ANAC58   -------- -------MYB52(1)    <-----------GT1          --------->TOE2(2)            <---------ANAC58   <------- --------HVH21   ----------->GT1   ------>ZmHOX2a(1)                 <----------DOF2  <---------ALFIN1   gttagagccacatttagtttagttacattgcgatgtccttgataaaacctcggtatagggccttcacatagctttgtcttgtcgtaccacacaccgatat  20371700                                                                        ---------->DOF2                                                                      --------->LBD16                                                                    ------>NtERF2                                                                    <---------LBD16                                                    ------>ZmHOX2a(2)--------->ANAC46                          <----------DOF2   <---------ZAT2          --------->At4g35610         --------->ANAC55(2)    <---------MYB52(1)--------->ARR11(3)<---------At4g35610           <--    <----------DOF2      <---------ICU4     --------->ZAT2          --------->LBD16               <-- ------>HVH21           <---------ATHB12 <---------ANAC58          <---------ANAC46            <----- ->ARR14(2)    <---------ICU4  <-------GAMYB--------->At4g35610   <---------LBD16              ------ --ARR14(2)    <---------AHL20(2)        <---------ANAC58 <----------DOF2                <---------WOX13(1)   gacctcctttctcgtaataaatcccaatcttttcgttgggattacgagctgtgatctcgactttaaactccgcggaaagagagaggtctagattgattcc  20371800                                                                         --------->LBD16                                                                        ------->GAMYB                                                                        --------->RAP2.6(2)                                                                        --------->ANAC58   ----------->GT1                                                      --------->TOE2(3)   <------MYB83                                                         --------->ANAC46   <------MYB46(1)                                                      --------->ANAC58  --------->MYB111(1)                                                  --------->MYB46(3)  <---------MYB46(3)                                              ------->GAMYB  --------->MYB59                                                 <xxxxxxxxxxxxxxxxsmallRNA(s)  --------->MYB111(2)                                             --------->ANAC58  --------->MYB46(2)                                              --------->ANAC58 <--------P                                                       --------->RAP2.6(2) -------TOE2(3)                               --------->ALFIN1    --------->ANAC46 -------TOE1(2)                  <---------LBD16                 --------->MYB46(3)               <-- ------------AGL1               <---------LBD16       ---------->DOF2  <------------AtMYB77       --- ----------->AGL1   --------->WRKY38(1)     <---------ANAC46    >>>>>>>>>>AtWER          <------ZmHOX2a(2)   aaggttggtaactcgtaaactgttgacttcgtaactcgggagtttagggtggaaaacaaagtatacaaccgcaaccgcaattgctaacgcgatcaatgca  20371900                           <---------ARR11(3)                                     <-------GAMYB                           --------->ARR11(3)                                     --------->At4g35610                           <---------GLK1(2)                               --------->ARR14(2)                       ---------->DOF2                                    --------->ARR14(2)                     --------->MYB46(3)                                   <---------ARR14(2)                   ----------->RAV1(1)                                   <------NtERF2                   ------>MYB83                                       <---------LBD16                   ------>MYB46(1)                                    <------NtERF2          --------                 <---------MYB55(2)                                 <---------DEAR3(1)  <---------LBD16                 --------->MYB46(3)                                 --------->ALFIN1--------->WRKY38(1)                --------->ANAC58               <---------GLK1(2)   <------ZmHOX2a(1)--------->WRKY12                --------->ANAC58            <---------------------WRI1--------->ATERF1(1) --------->LBD16 -------ATHB12  --------->ANAC46           <-----------GT1    --------->MYB52(1) <---------MYB46(3) ------>ICU4   ------->GAMYB       <---------At4g35610    <------ZmHOX2a(1)<---------ARR14(2)--------   atgactagaaggcttaacacccaacaaaagattttgcagcacatatttcgattcttactaggaataacaggaggcggaatcggccgttgaaccggaagca  20372000                   <-----------RAV1(1)                                                      ---------              --------->At4g35610                                                        ------>ZmHOX2a(2)              <---------At4g35610                        <---------LBD16               <---------AGP1              --------->ZAT2                            --------->MYB52(1)             --------->ARR11(3)              <---------ZAT2                           --------->ARR14(2)              <---------ARR11(3)           <---------MYB52(1)                          <---------ARR14(2)              --------->ARR14(2)          --------->LBD16                     <---------------AGL15                    <---------ARR14(2)         --------->HSFB2a(2)                  --------------->AGL15           ------>ZmHOX2a(2)        <---------LBD16                      ----------------->AGL1          <---------GLK1(1)     <----------DOF2  <---------MYB46(3)     ----------------->AGL3<---------AHL20(2)  ------->TEIL ->ANAC58<---------HSFB2a(2)              <---------ANAC58  ----------->GT1 <---------ARR11(3) ->ANAC58<---------LBD16                  <---------ANAC58 --------->LBD16  --------->ARR11(3)  <----   agactgtctttccgggagctggtgttgttgtcttcgtcttgttggcttccatttgaagaaccgggtgaattttttgttgatctcccatggatctacaact  20372100                       ------>MYB46(1)                       ------>MYB83                       -------->P       <----------DOF2                   ------->TEIL         <---------DAG2                                             <-                 --------->ZAT18      ------->TEIL                                                 <-                 <---------ZAT18  <---------------AtSPL8                                 <----------DOF2 *TSS----------->GT1  ----------->RAV1(1)     <---------AHL20(2)            <-----------GT1      ---- >REM1(1) --------->ZAT6          --------------->AtSPL8       <---------ANAC58    <---------AtLEC2-- ------DOF2--------->YAB1       <---------AHL20(2)             <---------ANAC58  --------->AtLEC2----   ttgtatttagtaatactaatgcaccaacatgtattatatgtactttattttatatcaaagttttgtcttgtgaagttgtttccatgcatgacttttacca  20372200                                       --------->ARR11(3)        ------>MYB83                   --------->AHL20(1)        ------>MYB46(1)                --------->AHL20(2)      <---------MYB59                  <---------AHL20(1)   <-----------GT1               --------->YAB1 --------ARR11(3)             --------->WOX13(1) ----------ARR10             --------->AHL20(2) -->MYB46(1)          --------->TOE2(3)<---------AHL20(2)               --------->ZAT6    --------->AHL20(2) ------->ARR11(3)   <---------TOE2(3)  <---------ARR11(3)  <---------MYB46(3)   <----------DOF2    -- -->MYB83  ------>ZmHOX2a(1) <---------AHL20(2)           <--------P   <---------At5g28300<---------AHL20(2)   acatcttaccttcctcacctataacgttgaattaatcagaatatattagaaagactagaggttgttcaacagttacagtaatctttttgtatttaattcg  20372300                                                                                   <---------ARR11(1)                                                                                   --------->ARR14(2)                                                                                   <-----------ARR10                         <---------ANAC46                    <---------HSFB2a(1)   --------->ARR11(3)                   <---------ATHB12                  <----------DOF2               <---------ARR11(3)                --------->AHL20(2)              ----------->STF1     <---------ATHB12  <---------AHL20(2)     ----------->GT1      ----------->TGA1  >>>>>>>>>>>>>>>>>LFY     <----------DOF2  --------->AHL20(2)--------->ATHB12        <------ZmHOX2a(1)--------->HSFB2a(1)   <---------ARR14(2) ------->YAB1   <---------AHL20(2)        --------->MYB59  ----------->RAV1(1)    <---------CCA1(2)   ataataaaacaaaaacaataaatcattcggtatattggtttagttaggatgacgactttggcaacattccaatgttttcaacacatatcttctttttgtt  20372400                         --------->YAB1                     --------->LBD16                    ----------->GT1                    <---------ANAC55(2)                 -------->P --------->YAB1                ------->GAMYB               <---------MYB55(2)               <---------MYB52(2)               --------->MYB46(3)               <---------MYB111(1)               <---------ALFIN1                                             --------->YAB1   <-------               <---------MYB111(2)           --------->GLK1(2)        <-------TEIL          ---------             ----------->RAV1(1)        <------ZmHOX2a(1)         <---------YAB1            <--------           <---------At4g35610        <---------TOE2(3)         <-----------GT1             <--------           --------->At4g35610 <---------GLK1(2)              <---------AHL20(2)     --------->ZAT6   catctctatgttcagcaacaacccgtataatcaaattcttgaggaagaatttgaaaactacaatttttatgatacatttcataactatcactaatttttt  20372500                                                            ---------->DOF2                                                         --------->YAB1                                                     --------->AHL20(2)                                                    <---------AHL20(1)                                 <---------AHL20(2) <---------ARR11(3)                         <---------ICU4       <---------HSFB2a(2)                        <---------YAB1  --------------->AGL15                         <---------GLK1(2)       --------->ANAC46 <---------AHL20(2) <---------AHL20(2) ----------->GT1   --------->AHL20(2) --AHL20(2)           --------->YAB1    <---------------AGL15--------->DAG2     <---------AHL20(2) >AHL20(2)        <------ZmHOX2a(1)   <-------TEIL  --------->ARR11(3)  ----------->GT1             < -AHL20(2)    ---------->DOF2    --------->AHL20(2) --------->AHL20(1) <---------TOE1(3)        ----- -AHL20(1)----------->RAV1(1)  <----------DOF2--------->HSFB2a(2)      <---------TOE2(3)      <------   ttttcaaaaacaccacaaaaggatttataatttctttaaatacattttatagaaaatatttataaagttatataaggttttataaattgattcttgaatg  20372600  Previous    Next  AGI:  At1g54540.1    Description:  similar to harpin-induced protein-related / HIN1-related / harpin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G65690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62044.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 20371239    to: 20372101    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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