Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->GT1 ------>HSFB2a(2)             <---------ICU4      --------->ANAC58 ------LBD16                 <---------YAB1       --------->ANAC58 ---->ZAT2                   --------->ICU4   --------->ANAC58 -----ZAT2  <-----------GT1--------->YAB1     --------->ANAC58                                 ------ ---->At4g35610            <---------ICU4---------->DOF2                                --------->ANAC58 ------>RAV1(2)        <-------TEIL --------->TOE2(3)            --------->ANAC58       --------->ANAC58 -GT1       --------->MYB52(1)--------->YAB1  --------->ANAC46   --------->ANAC58 <---------YAB1   ctggaaaatacaaataacagtgtgatacatcatgataacattagaaagacgcaagaatgtaaaccccaagtcaagtttctatttttgattaagcaaatga  20365800                        --------->TOE2(3)        --------->CCA1(2)       --------->ARR14(2)       <---------ARR11(3)                                                --------->ANAC46       --------->ARR11(3)                                               --------->LBD16       --------->ARR11(1)                                         <---------ICU4       <---------ARR14(2)                 <----------DOF2       --------->ANAC55(2) <-----------GT1      <-------TEIL     <-----------GT1    --------->AHL20(2) --->YAB1     <----------DOF2 ---------->DOF2  <----------ID1   <---------ANAC55(2)   aaataacaagatatgactttaagttacattagaaaagagattaactttaaggccaaagaatcaaatacttattccacaaaaccatttgttcaactaaaca  20365900                 <---------ICU4                 --------->YAB1                                         ----------->GT1                 --------->ATHB12          <---------YAB1              <---------TOE2(3)                --------->ICU4          --------->GLK1(2)           --------->AHL20(1)                <---------ATHB12    --------->YAB1                 --------->YAB1        <---------AHL20(2)         --------->LBD16          --------->AHL20(2)         --------->ANAC58            --------->AHL20(2)  <---------MYB52(1)          --------->YAB1                 --------->ANAC58--------->ICU4 ---------   agctgttactccgaagaaatcattacattctatgaaaataataatctaattgcatccacttagaagcaaaaataatgtaattagcatcaaattaaaaaga  20366000                                                             --------->ANAC58                                                             --------->ANAC46                                                             --------->ANAC58                                                      --------->ANAC46                                                      --------->ANAC58                                                      --------->ANAC58     <---------------------WRI1                                      --------->MYB46(3) ----------->RAV1(1)       --------->GLK1(2)                              --------->ETT(2)      <<<<<<<ZML2        --------->ANAC58 ->DOF2                       <---------ETT(2)  --------->TOE1(2)      --------->ANAC58      >>>>>>>>   ccctagagagcaaaacagagaaattacagaggtagacagaacaaacaaaacctagaacgcaacaagacagagcaaacaatgaaacaatctatgaagaaga  20366100                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC46                           ------>ZmHOX2a(2)                           ==================================HOX2a_HOX2a                          <------ZmHOX2a(2)                          ===================================HOX2a_HOX2a                          --------->CCA1(2)                         --------->ARR11(3)                                       <---------YAB1                         <---------AGP1                                         --------->ATHB12                         --------->AGP1                           <---------GLK1(2)                         <---------ARR11(3)                       --------->ARR11(3)                =                     ---------->DOF2                              <---------ARR11(3)                <           <---------GLK1(1)----------->HVH21          ---------->DOF2   <---------ANAC58         <--        --------->ANAC58 --------->ARR14(2)           <------ZmHOX2a(1)  <---------ANAC58       <----        --------->ANAC58 <---------ARR14(2)         <---------TOE1(3)<---------ANAC58           ----- >TBF1  --------->ANAC46--------->RVE1(1)           <---------TOE2(3)<---------ANAC58    <---------PCF2   atactgacccaagaaatcagagaaaaagatctgatggcgagagtttaagagtttaaggaaagaagaaagatacttgcgagagtgattagtggggacgaag  20366200                                                                  <---------bZIP60(1)                                                                  <---------TGA2(1)                                                           <----------DOF2                                                          <---------ANAC46                                                          <---------ANAC58                                                       <---------RAP2.6(2)                                                      <XXXXXXXXXXXXXXXXXXXXXMIR2935                                                  --------->YAB1  --------->TGA2(1)        <------MYB83                          --------------->AGL15        <------MYB46(1)                      ----------------->AGL3       --------->MYB59                       <-------TEIL <---------ANAC58 <---------------AGL15                       <-----------------AGL2                --------->ARR11(3) ==============================================================MADS_MADS           <---------AHL20(1) -----------------AG                         <-----------------AGL3               ----------->TBP --------ID1*TSS               ---------->DOF2<---------------AGL15<-----------HVH21              --- -----At4g35610       --------->ZAT18       <------ZmHOX2a(2)     --------->bZIP60(1)          <----- ---->At4g35610       <---------ZAT18      --------->AGP1<------NtERF2            <---------CCA1(2)   atgacaaatttggtagagagatagtggacaagtgaaagaaatttagatccattaatggtggctttgtgatgtcacaaaactcttatatattccatcactt  20366300                                                   --------->TOE2(3)                                                  --------->YAB1                                                  --------->ATHB12                                                  <---------ICU4                                             <---------AHL20(2)         ----------->TBP                  <---------ARR11(3)    <---------ARR11(3)             --------->AHL20(2)       --------->ANAC55(2)    --------->ARR11(3)             <---------AHL20(2)       <---------ANAC55(2)   --------->CCA1(1)           <---------AHL20(2) <--------HAHB4 --------->YAB1               --------->AHL20(1) <---------ATHB12 <---------ICU4               <---------AHL20(1) --------->ICU4 --------->AHL20(2)      --------->AHL20(2)  --------->AHL20(2) ------>YAB1         ----------->GT1      --------->ARR11(3)----------->GT1  <----------DOF2      <-- -----DOF2--------->AHL20(2) <---------AHL20(2)  <---------YAB1    ----------->GT1                ---   taataatatctataaattctatattgtttatatatatttatatagattttaatcattagaatatgtaatatgttataagcttttgagacagtttacatcg  20366400              --------->YAB1           --------->WOX13(1)         --------->MYB46(3)        -------->P        --------->ANAC58                                                                         <---        --------->ANAC58             <-----------GT1                        --------->AHL20(2)   <---    --------->ANAC46            <---------AHL20(2)             <---------TOE2(3)                <----    --------->ANAC58            --------->AHL20(2)    <---------ANAC55(2)--------->ARR11(3)     -----    --------->ANAC58     --------->ARR11(3)      <-----------GT1         <---------ARR11(3)     <---- -------ARR14(2)         <---------ARR11(3)<---------AHL20(2) <-----------GT1                 <------ ------>ARR14(2)    --------->AHL20(2)<---------TOE2(3)  --------->AHL20(2) <---------AHL20(2)<------   gattttaagcaaccaattacaaataaacatcttattaattaacatttttttttatcacataaattaacatttttagattttaatatgttctgtattaaga  20366500                                                                                            <xxxxxxxx                                  <---------ARR11(3)                                     <xxxxxxxxxxx                                  --------->ARR11(3)                                     <---------ARR11(3)                                 <---------CCA1(2)                                       --------->ARR11(3)                             <---------AHL20(2)                                         <---------CCA1(2)                             --------->AHL20(2)                                        xxxxxxxxxxxxxx                           --------->AHL20(2)                                         <------MYB46(1)                         --------->AHL20(2)                                           <------MYB83    --------->YAB1       <---------AHL20(2)                                           xxxxxxxxxxxxxxx   <---------YAB1      --------->AHL20(2)                                           <xxxxxxxxxxxxxxxx ------RVE1(1)         <---------AHL20(2)                                          xxxxxxxxxxxxxxxxxx ------CCA1(1)       <---------AHL20(2)                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -----ARR11(3)       --------->AHL20(2)                                    <---------ARR11(3) ---->ARR11(3)     --------->AHL20(2)                                      --------->ARR11(3) -----AHL20(1)     <---------AHL20(2)      <-----------GT1                xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---TOE2(3)      --------->AHL20(2)  <----------DOF2          ---------->DOF2 <---------HSFB2a(2) ---YAB1 --------->AHL20(2)<---------AHL20(2)   <---------TOE2(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   tatttatgaaaataaacatatatatatatatatatatatcttttttaactaagtttattacaaaaaaagaagtctaagttcttgaagttggtatctttgg  20366600                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               <xxxxxxxxxxxxxxxxsmallRNA(s)                               xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          --------->At4g35610                          --------->GLK1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------ARR11(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     --------->ARR11(3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          --------->AHL20(2)    <---------GLK1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     <---------YAB1    --------->GLK1(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       --------->ICU4 xxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             --------->YAB1 xxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------YAB1       --------->AHL20(2) xxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->AHL20(2)         - xxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       ----------->GT1 --------->AHL20(2) xxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->DAG2   --------->YAB1 <- xxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        ---------->DOF2--------->YAB1    --   aattggatatctaatacattttaagagcatctccatcagtagtctcttacatagtttctcattaactaaaaagtataaaataataataaaaatagaagag  20366700  Previous    Next  AGI:  At1g54510.1    Description:  ATNEK1; kinase. Identical to Serine/threonine-protein kinase Nek1 (NEK1) [Arabidopsis Thaliana] (GB:Q9SLI2;GB:Q9SLI3); similar to ATNEK2, kinase [Arabidopsis thaliana] (TAIR:AT3G04810.2); similar to ATNEK2, kinase [Arabidopsis thaliana] (TAIR:AT3G04810.1); similar to LSTK-1-like kinase [Lycopersicon esculentum] (GB:AAL04423.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43033.1); similar to NIMA-related protein kinase [Populus tremula x Populus alba] (GB:AAL79042.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains Int Range:  from: 20362003    to: 20366212    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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