Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------GLK1(1)                  --------->GLK1(1)         --------->TOE2(3)        <--------HAHB4        --------->YAB1                                  ---------->DOF2        <---------ICU4                         <---------bZIP60(1)        --------->ATHB12                       --------->bZIP60(1)       <---------ATHB12                   --------->CCA1(2)       <---------YAB1                    <---------ARR11(3)                                      ----       --------->ICU4  ------>ZmHOX2a(1) --------->ARR14(2)                                  <-------     <---------ICU4   <---------ANAC58   --------->ARR11(3)             ----------->GT1      <-------     --------->YAB1   <---------ANAC58   <---------ARR14(2)            <---------AtMYB61 --------->YAB1    <---------ATHB12  --------->TOE2(3) <---------HSFB2a(1)          <----------DOF2  --------->WOX13(1)   aaatcaataatcattagaagaattccttatcaacgaattggaagatttgatgtcattgcaaagcttgaaggctttggtgaaaacacatcaatcttacttg  20348000                                                                           --------->ICU4                                                                           <---------ATHB12                                                                      --------->ANAC58                                 --------->AHL20(2)                   <---------ANAC55(2)                                 <---------AHL20(2)                   --------->ANAC46                              --------->AHL20(2)                      --------->ANAC55(2)                              <---------AHL20(2)                      --------->ANAC58     ----------->RAV1(1)   --------->YAB1                     <------ZmHOX2a(2)  <---------At5g28300 ------>ID1              --------->AHL20(2)                 <------ZmHOX2a(1)--------->WOX13(1) --ANAC58                <---------AHL20(2)           --------->YAB1 <---------LBD16 --ANAC58     ---------->DOF2--------->AHL20(2)   <----------DOF2   --------->MYB52(1)       <-------   tcccttacaacagatagaaagatgtgttttaataaataaatgcaaacagagacttttcataaggatcacattacggaatcattcaccatggtccatgtca  20348100                                                 ------>NtERF2                                                 ----------->RAV1(1)                                                 <---------RAP2.6(3)                                                --------->DEAR3(1)                                                <---------ETT(1)                                                >>>>>>>>>>DREB2A                    <---------MYB52(1)        <---------At4g35610                                 ---               --------->MYB52(1)             --------->At4g35610                       <---------GLK1(2)            --------->ANAC55(2)    <----------DOF2 <---------ALFIN1                    --------->At4g35610            <---------ANAC55(2)<---------CCA1(2)--------->RAP2.6(2)                    <---------At4g35610 ----HVH21--------->AHL20(2)  ------>ZmHOX2a(1) >>>>>>>>>>DREB1A            <------------MYB.PH3(1)   aatccaaaacaattacataacagtttgttctccttatcttttgtagtaagccgacacattccacagttttagacaataactgtttcttcagcttcttatg  20348200                            --------->TOE2(3)                       <---------ARR11(3)                       --------->ARR11(3)                       --------->AHL20(1)                     ------->TEIL               --------->ANAC58                  <---------ATHB12              --------->ANAC58  <---------ANAC58                --------->WOX13(1)              <---------ANAC55(2)                    --------->ANAC58              <---------ATHB12     <---------YAB1              <---------ZAT14         --------->ANAC58            --------->WOX13(1)    --------->ARR11(3)       --------->YAB1      --------->YAB1           --------->AHL20(2)     <---------ARR11(3)    --------->WOX13(1)    <---------ATHB12     ----------->RAV1(1)   ----------->GT1 <---------------AtSPL3 <---------ANAC58     --------->ANAC46 ---->TEIL <---------AHL20(2)   --------->ICU4  --------->ANAC55(2)     ------>NtERF2---------->DOF2   tatattgccacaataaatcaatgaatatatcgtaaatatcattgtttagtacgtaagtcaatgagagtacttgcagcctaatcatccaaaagcaacttgc  20348300                                                 --------->YAB1                                                 --------->ATHB12                                                 <--------ATHB1                                                 <---------ICU4                                                <---------YAB1                                           --------->TOE2(3)                                    ---------->DOF2<---------YAB1                             ------------>CBF   --------->ICU4           --------->DAG2                           --------->TOE1(3)    <---------ATHB12    *TSS---------->DOF2                 <---------DAG2--------------->AGL15         --------->ANAC58                  XXXXXX              <---------ALFIN1 <---------------AGL15         --------->ANAC46        <-----------HVH21        --------->At4g35610--------->TOE2(3)------------>CBF --------->ANAC58       <----------DOF2   aaatgaaatgtgctccccactctttgaaaccttcaatataaagaacatcaatgattatagaacaagcaaacaaaaaaagtttcaagctttcagacaaaaa  20348400                                                                                          --------->LBD16                                                                                          <---------LBD16                                                                                         <---------LBD16                                                                               --------->YAB1                                                                              <---------ATHB12                                                                            --------->WOX13(1)                                                                          <------ZmHOX2a(2)                                                  <------ZmHOX2a(2)      --------->ARR11(3)                                   ======================HOX2a_HOX2a     <---------ARR11(3) XXXXXXXXXXXXXX>MIR3933            ------>ZmHOX2a(1)         <---------WRKY38(1)  --------->YAB1    -   caaaatgaagactaattttgttattctacttcttctcctctgtgtttttgcgatcagccctagtcaacaagaagagatcaatcaacataatccagggata  20348500                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                              <------                                                                                              <------                                                                                 --------->At4g35610-                                         --------------------->WRI1   --------->ANAC58     <---------RAP2.6(2)                                      --------->ARR11(3)              --------->ANAC58   <-----------RAV1(1)     ---------->DOF2                  <---------ARR11(3)--------->GLK1(2)        <---------At4g35610< -------->YAB1           ----------->RAV1(1)           <---------GLK1(2)     <----------DOF2  <------   tatcatcaaaagctgctatacaaggtccaacaatggagaacatctttgaaagaatcaaattctgtagaactcaagctatctttagcagccattgtggctg  20348600     <---------YAB1     <-----------GT1 -------ANAC58                                                          --------->ANAC58 -------ANAC46                                                          --------->ANAC58 -------ANAC58     --------->TOE2(3)     --------->ARR14(2)             --------->ANAC46 ---ANAC58    --------->ZAT2            <---------ARR14(2)            <---------ICU4 ---ANAC58 <---------ANAC58         ------->MYC3                      --------->YAB1 ---------->GT1  ------>NtERF2      <-------MYC2             <---------ICU4 ---------ZAT6<---------ZAT2        <-------MYC3    <---------AtMYB61<---------ATHB12<---------LBD16 ---ANAC46 <---------ANAC58         ------->MYC2 --------->ALFIN1  --------->WOX13(1)<---------At5g28300   gagtgttatacttccttgctgccttaatctcgagcgcatgtggaatcggcagtggaggtttattcattccaatcacgactctagtttcacggctagactt  20348700                                  ----------->GT1                                          --------->GLK1(2)                         --------->ANAC58                                          <-------MYC3                         --------->ANAC46           <---------TOE2(3)              ------->MYC3                         --------->ANAC58          --------->YAB1               <---------ALFIN1                      --------->ARR14(2)<---------ARR11(3)                  --------->AtLEC2       <-------TEIL   <---------ARR14(2)--------->ARR11(3)           ----------->GT1      <---------GLK1(2)   gaaaacaggttcaagcttctatagtatacgaaatagatgttaaatcttatctataatgtttcaattctaagtggtaacatgcacacgttttagaatctat  20348800                                      --------->AHL20(2)                                      <---------AHL20(2)                             <---------AHL20(2)                     <---------ARR11(3)                 --------->YAB1       <---------AHL20(1)                               <---------WOX13(1)                <---------ATHB12      --------->AHL20(1)                           <---------WOX13(1)              --------->WOX13(1)   ------->TEIL                            --------->LBD16     <---------RVE1(1)      <---------AHL20(2)                           <---------LBD16         <---     <---------CCA1(1)      --------->AHL20(2)                         --------->ARR14(2)        ----    --------->ARR14(2)  <---------AHL20(2)                      <---------ATHB12  <---------AtLEC2    <---------ARR14(2)  --------->AHL20(2)                      <---------ATHB51  <---------ANAC58---    <---------ARR11(3) --------->AHL20(2)                     --------->WOX13(1)  <---------ANAC58<--   atagtggatattttctcaatcaagatttaattttatgcattttattgactaatcttttaaaaaccaattatgcaatccgcatttgcttgatagatttgat  20348900  Previous    Next  AGI:  At1g54470.1    Description:  RPP27 (RESISTANCE TO PERONOSPORA PARASITICA 27); protein binding. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G74180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40293.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 20348368    to: 20352869    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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