Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                              <------                                                                                            <--------             <---------ICU4                                                              --------->TGA2(1)            <---------YAB1                                                               <---------TGA2(1)            --------->ICU4       --------->MYB52(2)                    --------->ZAT18   --------->bZIP60(1)            <---------ATHB12   <---------MYB52(1)             ------>ZmHOX2a(1)          <---------bZIP60(1)     <---------ANAC46         --------->TOE2(3)              --------->TOE1(2)        <---------MYB52(1) ---------REM1(1)--------->YAB1------>ZmHOX2a(1)             --------->TOE2(2)     <------NtERF2 ---->DOF2--------->YAB1 <---------KAN4(1)                 <---------YAB1     <-----------RAV1(1)   agatgtaacctgtaatcattcataccaatattccttagttccatataccaaaacacatattatcctacgagtttgcactaatgtcgtcgttatgtcacca  20342800                                                                                      --------->YAB1                                                                                --------->HSFB2a(2)                                                                                <---------HSFB2a(2)                                                                               <---------LBD16                                         --------->AHL20(2)                <---------ARR14(2)   --------->ANAC58                      <---------AHL20(2)                <---------ARR11(3)   --------->ANAC58                 <---------AHL20(2)                     --------->ARR14(2) --->ATHB12              <---------CCA1(2)---------->DOF2                  --------->ARR11(3) ---YAB1          --------->DAG2    <---------AHL20(1)                    <---------CCA1(2) ---GT1          ---------->DOF2    --------->AHL20(2)          --------->TOE2(3)--------->LBD16-----   ttgggactcaacaaaaaaaaaaagcacatatcatccaaaaaatttaaagacattacaaaacttatttcttaatttcatatctccagaatcatatattcct  20342900                                       --------->ANAC58                              --------->LBD16                            --------->SPL7                          <---------SPL7 --------->ANAC46                       <---------At5g28300----------->RAV1(1)                       <---------DOF5.7(2)<---------ALFIN1                      <-----------GT1  --------->ANAC46       --------->ARR11(3)                   <---------ZAT6      --------->ANAC58       --------->ARR14(2)                    -               <-------GAMYB<---------LBD16                   <---------ARR14(2)                    <              <---------MYB46(3)<---------ARR14(2)            <---------ARR11(3)       --------->ATHB12  <---------YAB1<---------MYB52(1)<-------TEIL               <---------CCA1(2)  <---------YAB1      - ->ZmHOX2a(1) --------->MYB52(2)--------->ARR14(2) --------->TOE2(3)       <---------At4g35610      <   agtgatttttgctagttcgttgtgttaccgtccggattcataccccacatatttcttaatttcatatctccatagtcatcttattctagtgatttgtgct  20343000             <-----------GT1                                                <------MYB83          --------->TGA2(1)                                                 <------MYB46(1)          <---------bZIP60(1)                                           --------->ATHB12          --------->bZIP60(1)               --------->ANAC58         ------>MYB46(1)        <---------ICU4        <---------ANAC55(2)                    --------->MYB52(1)       --------->ICU4         --------->ANAC55(2)                    ------>MYB83<---------LBD16  ----------->GT1       --------->AHL20(2)  --------->ANAC58        --------->MYB55(1)      --------- -------->ZAT18      <---------TOE2(3)  --------->CCA1(2)          <---------MYB59  <------ZmHOX2a(1) ---------ZAT14     ---------->DOF2--------->YAB1                  --------->MYB46(3)       --------- -------->ZAT14    --------->AHL20(2)<---------YAB1                <---------MYB46(2)       --------- ---------ZAT18<---------YAB1<-------TEIL   --------->ANAC46    <-----------GT1  <-----------RAV1(2)   agtgcggtcattatgtcaccattaaagaaaatacatattatgatacaagaaaaatggaagaaacatttaccaaacgattggtttcaggaagagcaagcca  20343100                                                                                     --------->TOE1(3)                                                                                     --------->TOE2(3)                            --------------------->WRI1                             <---------TOE2(3)                     <---------ARR11(3)                                            <---------TOE1(3)       <---------ARR11(3) --------->ATHB12                                        --------->MYB52(1)       --------->ARR11(3)<---------YAB1                                       <---------ARR11(3)   ---------->DOF2   --------->ARR11(3)                                      <---------CCA1(2) >ANAC46             --------->GLK1(2)                               --------->MYB46(3) <---------DOF5.7(2) >ANAC58             <---------ARR14(3)                            ----------->RAV1(1)--------->DOF5.7(2) >ANAC58             --------->ARR14(3)                     <--------P --------->At4g35610   ttgatcaaagagcttcttaacaaaatcttgattagatttcatcgacattggcgatgtctctggtaactgcaacagctctatatctaacgttatcgactcc  20343200                                                                            ---------->DOF2                                                                  <---------WOX13(1)        <----------DOF2                                          <---------ANAC46                 <--       ------>ZmHOX2a(2)                      ------>ZmHOX2a(1)  <---------ANAC58             <------     <---------ARR11(3)                   <---------ARR11(3)     <---------ANAC58           ---------     --------->ARR11(3)          <---------GLK1(2)           <------------CBF--------->DAG2--------->ICU4   attgtttgatctttcttccttcaaaactgtgatcaaattctcaaaatcctatttcttcaacaagattgcttgataagagaaagtgagagagtatttatga  20343300                                                                                              -------                                                                                            ---------                                                                                            <--------                                                                                         <---------MYB52(1)                                                                                        --------->LBD16                                                                                        <-----------HVH21                                                                                       <---------ANAC58                                                                                       <---------ANAC55(1)                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC58                                                                                       <---------ANAC55(2)                                                                                      ===============                                                                                      <-------TEIL                                                                                      ===============                                                                                     ================                                                                                     <------ZmHOX2a(2)                                                                                     ================                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(3)                                        --------->AHL20(2)                          --------->ARR11(3)                                   --------->AHL20(2)                               <---------ARR14(2)                              <---------AHL20(2)                         --------->DAG2<---------ANAC46 -----TEIL                   --------->YAB1       ------------>CBF     ---------->DOF2------>ZmHOX2a(2) ---YAB1                ------>ZmHOX2a(2)     <---------YAB1  --------->DAG2        <---------AGP1 >YAB1            <------------CBF <---------AHL20(2)        ---------->DOF2       <---------GLK1(1)   tacatttgtagcagtgtttgtattgatcgtataatattaaaaaaaaatatgattcaattcagaaaaagggaagaaaaggtatagtagatccgtgagatgc  20343400                                                                                   <---------TOE2(3)                                                                                   <---------TOE1(3)                                                                                  <-----------GT1                                                                                  <---------DOF5.7(2)                                                                                  --------->MYB52(1)                                                                             --------->AHL20(2)     <------ZmHOX2a(1)                                                       <---------AHL20(2)  <------ZmHOX2a(1)                                                       <--------HAHB4 -->GLK1(2)                                                               --------->ATHB51 >At4g35610     ---------->DOF2                                           <---------ICU4 -At4g35610 <----------DOF2           <---------DEAR3(1)    ----------->GT1 <---------YAB1 ========HOX2a_HOX2a                  <---------MYB46(3)  --------->DAG2 <---------YAB1 ===========HOX2a_HOX2a          <---------TOE1(3)       --------->DAG2  --------->ICU4 ===========HOX2a_HOX2a          <---------TOE2(3)      ---------->DOF2--------->YAB1 ========HOX2a_HOX2a   <---------HSFB2a(2)            <------ZmHOX2a(1)<---------ICU4   tggaggaggattagctttgaaagttgcagaaatttaagggtcgatggagagagagaggaaaagggtaacacactcattattaattaacgttttttcttca  20343500                                                                               <---------TOE2(3)                                                                               <---------YAB1                     ----------->GT1                                          <---------AHL20(2)                 --------->YAB1                                               --------->YAB1                 <--------HAHB4                                     <---------ANAC58              --------------->AGL15                                 <---------ANAC58   --------->ZAT14              <---------------AGL15                               <<<<<<<<<<WRKY63<---------YAB1             <-----------------AGL3         <----------DOF2      --------->WRKY38(1)   <---------ZAT14          --------->AHL20(2)              ------->TEIL        <---------ZAT6  --------->AHL20(2) ---------->DOF2<---------YAB1      --------->ICU4   <---------AHL20(2)     <---------YAB1    <------ <<<<<<<<<<<<WRKY18--------->ICU4 ---------->DOF2    --------->AHL20(2)----------->GT1 <---------ZAT18   gtcaaaagtcaataaactataattagtaaaatgttgaaaagatgaactttactaaaaaattgtactgttgacttggttattaatattagtgtagtctata  20343600                            --------->MYB46(3)                   <-------PIF5                   ------->PIF5                  --------->O2                  <---------O2                  <---------TGA1a           --------->HSFC1(2)      <-----------GT1     ----------->RAV1(1)     --------->AHL20(2)--------->ANAC58     <---------HSFC1(2)     <---------AHL20(2)--------->ANAC58    --------->ANAC58    <---------AHL20(2)  <---------ICU4  --------->TGA1a          --------->ANAC58    --------->AHL20(2)            <------- --------->ICU4   --------->ANAC58    <------ZmHOX2a(2)       --------->AHL20(2)     --------->ICU4 ---ZAT14         --------->ANAC58  <---------At4g35610       --------->YAB1    ----------->HVH21<---   ctactaattaactagttggcacgtcgagcaacaaatacagatcacaagcttcttacatttgcaattaaaattttgagtctccatgacattatcaactttc  20343700  Previous    Next  AGI:  At1g54450.1    Description:  calcium-binding EF-hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28900.1); similar to calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative [Arabidopsis thaliana] (TAIR:AT5G44090.1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to putative protein phosphatase 2A regulatory subunit [Oryza sativa (japonica cultivar-group)] (GB:AAK13162.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40604.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65086.1) Range:  from: 20340007    to: 20343202    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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