Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                            ---------               <---------YAB1                                                               <--------           --------->TOE1(3)                                                                <--------           --------->TOE2(3)                                                               <---------          ----------------->AG                                                           <---------At4g35610    <------ZmHOX2a(2)                                                                    <---------ZAT2    --------->CCA1(2)                                                              <-----------HVH21   --------->AGP1----------->GT1  --------->ATHB12                 --------->TOE1(3)     --------->At4g35610   <---------ARR11(3)            <---------YAB1                    --------->TOE2(3)    <-----------RAV1(1)   --------->ARR14(2)            --------->ICU4              --------->YAB1     <---------At4g35610--   <---------ARR14(2)  <---------AHL20(2)     <---------YAB1<---------YAB1   <-----------HVH21 <-----   --------->ARR11(3) --------->ICU4       ------->TEIL----------->GT1      <-----------RAV1(1)------   accaagatccaaaccttattagtaaatatttgttcatgatttatgtatatgattaagaagttataaaaaccttaatcgctgtcgctgtcactgctgctgc  20314000                                                                  =========================bZIP_DOF                                                                  <----------DOF2                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------ANAC58      <----------DOF2                                                            <---------ANAC46          <---------ANAC58                                                            =================bZIP_DOF <---------ANAC58  ----------->HVH21                                         --------->TGA1a      <---------TGA1a --------AtMYB61                                            <xxxxxxxxxxxxxxxxxsmallRNA(fl3)        -- ------ANAC46                                               <---------TGA1a      --------->TGA1a   -- ----At4g35610--------->ICU4                                <---------O2         <---------O2-------- --->At4g35610<---------YAB1                                --------->O2         --------->O2-------- >At4g35610 --------->YAB1                                <-----------HVH21      =================bZIP_DOF -ZAT2      <---------ICU4                  ==========================bZIP_DOF   ==================== -At4g35610--------->ICU4                   ===============================================bZIP_DOF<- --RAV1(1) <---------YAB1                   <----------DOF2 =================bZIP_DOF <---------ANAC46 ------->ALFIN1  <---------YAB1       ------>ZmHOX2a(1)  --------->DEAR3(1)      <---------ANAC46 --- ----ZAT2--------->YAB1            ---------->ID1      <---------At5g28300     <-----------HVH21----- --->ZAT2<---------ICU4      ------>ZmHOX2a(1)      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<----------   tgtggtgaccatcatcatgatgtttcttctccttcttgtccttcttctttttcttctcaccgtcgtggcttttgccttctccgtcgtggcttttaccttc  20314100         ------>ZmHOX2a(2)       --------->ARR14(2)       <---------ARR14(2)       <---------ARR11(3)       --------->ARR11(3)       <-----------ARR10       <---------AGP1    --------->ALFIN1   --------->LBD16  <---------ANAC46                                                         <---------ANAC58  --------->DEAR3(1)                                                       <---------ANAC58 ------->DEAR3(1)                                 <---------ALFIN1      <---------CCA1(2) ------->AtMYB61                                 --------->MYB46(3)  <-------MYC3 ->TOE1(3)                                  <---------At4g35610      ------->MYC3 ->TOE2(3)           ------>ZmHOX2a(2)      <---------ZAT18       <---------DOF5.7(2) =========================bZIP_DOF          --------->At4g35610  <---------WRKY45 --------ALFIN1    <---------ARR11(3)  <----------DOF2           <---------WRKY12                 --- ------>MYB46(3)   --------->ARR11(3)  --------------------->WRI1<---------WRKY38(1)              <-- ---->REM1(1)  <----------DOF2       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------ANAC46       <-- -GT1 <---------CCA1(2)          <---------ARR11(3)             --------->DOF5.7(2)  ------>ZmHOX2a(1)   accaccgtggatcttgtctttgatcttgtcaacaataccttctttgtgctcaccactcttgtgctcgtcaacgtgtttcttgtgttcctcttccttcttg  20314200                                            ------>ZmHOX2a(2)                                            ======================HOX2a_HOX2a                                           <------ZmHOX2a(2)                                          <---------ARR14(2)                                          --------->ARR14(2)                                          --------->ARR11(3)                    ===============================HOX2a_HOX2a          <----------DOF2               <---------ANAC58      --------->ARR14(2)             <----------DOF2          <-----------RAV1(1)     <---------ANAC58               <-----------ARR10        <---------ANAC46          <---------ANAC58               <---------ARR11(3)        <---------ANAC58      <---------ANAC58                   <---------ARR14(2)        <---------ANAC58      <---------ANAC58                   --------->ARR11(3)      ------>MYB83  ------>ZmHOX2a(1)<---------ARR14(2)          <---------ARR11(1)      ------>MYB46(1)      --------->ALFIN1=======================HOX2a_HOX2a---------->ID1   <------ ------>At4g35610   ==============================HOX2a_HOX2a    --------->ARR14(2)  <----------DOF2 -------At4g35610------>NtERF2<---------ANAC46                  <---------CCA1(2)<----------DOF2 -------ZAT18  <---------ANAC58 --------->ALFIN1           ------>ZmHOX2a(1)<-----------GT1  --------   tgctcaccttccttgttgcctcctccaatgtggagtgcgtctccgatcttgttgatgagtcctgccatatctttcttttttctctttcttttgtattaaa  20314300                         <---------TOE2(3)                                       --------->YAB1                       ----------->HVH21                                        --------->ZAT6                     <----------DOF2                                         <---------AHL20(2)                    <---------ANAC58                                         --------->AHL20(2)                    <---------ANAC46                                         <---------ICU4                 <--------P                                           ----------->GT1                <---------ANAC58                               --------------->AGL15                <-------GAMYB                        --------------->AGL15  --------->ICU4                <---------ANAC58                    ============================MADS_MADS               <---------MYB46(3)          ---------->DOF2     <---------------AGL15               <------MYB83             ------>ZmHOX2a(2)      ----------------->AGL1             ---               <------MYB46(1)        <---------ARR11(3)      <-----------------AGL2            <----   <----------DOF2  <---------ANAC58  <---------AGP1----------------->AGL3  <---------YAB1 --------->YAB1 ---AHL20(2)  <---------AtMYB61       --------->ARR11(3)      ----------------->AGL2       --------->ZAT6 ->AHL20(2)   --------->MYB59        <---------CCA1(2)        <-----------------AG      --------->WOX13(1)   tctctcttttatgtgtttggttgctttgacgataaacttggatctcaaagggtctctatttatagcccaaaatggataattaatactaatctatcactat  20314400                                                                          ----------->ARR10                                                                       <---------ANAC46                                                                    <------NtERF2           --------->ATHB51                                         --------->ALFIN1           --------->ATHB12                                         <---------DEAR3(1)       <---------YAB1                                             <---------ANAC58       <---------AHL20(2)                                         <---------O2       --------->ICU4                                             <---------ANAC46     <---------RVE1(1)                                            <---------bZIP60(2)     <---------CCA1(1)                                            <---------ANAC58         ----------    <---------ARR11(3)                                     --------->CCA1(2)              >>>>>>>>>>>    --------->ARR11(3)                                    <---------ARR11(3)   <---------TOE2(3)    < ------>WOX13(1) <---------ANAC46 *TSS  <---------DAG2---------->DOF2 <------NtERF2--------->AHL20(2) -----YAB1<---------YAB1 <<<<<<<<<<GT-3b<----------DOF2   --------->ARR11(3) --------->CCA1(2)    ---   caatgagatattattattggtttgtatttttcttagagattactttatagtagaaagaaagatatatggcgtggcgaagataagattaattcttccaatg  20314500                              ------------>CBF                           --------->YAB1                           -------->HAHB4                        ---------->DOF2           --------------->AGL15                  <---------AHL20(1)        --------->AHL20(1)           <----------DOF2<---------YAB1          <---------AHL20(2)        <---------AHL20(1)           <---------------AGL15    --------->ATHB12     <----------DOF2  <---------YAB1          <-----------------AGL3   --------->AHL20(1)   --------------->AGL15          ===============================================================MADS_MADS       <---------CCA1(1) <---------ZAT14        --------->YAB1            --------->AHL20(1)     --------->AHL20(2) --------->ZAT14        <---------ICU4           --------->AHL20(2)      --------->AHL20(1) <---------SPL7        <---------ATHB51     <--------P  <---------------AGL15            <---------RVE1(1) -->CBF   ----------------->AGL2   <---------AHL20(1)  ----------------->AGL1           <---------ARR11(3) >>>>>>LFY<-----------------AGL1   --------->AHL20(2)  ----------------->AGL2           --------->ARR11(3) ----------DOF2        --------->ICU4     <---------ANAC46   ---------->DOF2<---------AHL20(2)    --- ------>At4g35610 ----------->GT1  <---------AHL20(2)  ----------------->AGL3       -----------------   tgctgtactggttctttaactggaaataatgatacaattaattggggtagattatattcctttaaaagaaagaaatattatattctcttagatattttca  20314600                                               <---------GLK1(2)                                              -------->HAHB4                                         <---------AHL20(2)                                    <---------AHL20(2)                           --------->AHL20(2)                                <---------RVE1(1)                                <---------AHL20(2)        <-------GAMYB          --------->ARR11(3)           <-----------------AGL2       <---------MYB46(3)      <---------ARR11(3)           <-----------------AGL1    <-----------RAV1(1)  <----------DOF2 --------->AHL20(2) ----------------->AGL1 ------>MYB46(3)  <---------YAB1<---------CCA1(1)  <---------YAB1    <------ZmHOX2a(1) ---->WRI1     --------->ICU4 <<<<<<<<<RAP2.2<---------ATHB12      --------->MYB59   actactatgtggttgcaatttttatttcttttagatattttttttaaatgattctgactatgtccatattaggaccatagtatataatttgaaggcatat  20314700                                                              --------->AHL20(1)                                                              <---------AHL20(1)                                                          <---------YAB1                                                   <---------O2                                                   --------->TGA1a                                                   ===============================================bZIP_DOF                                                   <---------TGA1a                                                   --------->O2<---------AHL20(2)                                                   <---------ANAC58                                                   <---------ANAC55(1)                         <-----                                         <---------MYB52(2)--------->AHL20(2)          <----------DOF2                                 <---------AHL20(2)<---------ANAC58                 <-----------GT1             ---------->DOF2     --------->AHL20(2)<---------ANAC46    <---------AHL20(2)  <---------ANAC58             ================================================bZIP_DOF  --------->AHL20(2)  <---------ANAC58   agtatagatgggattaaaagaactaaaatttggatttaaacaaactaactcagacgtgtgattatatatttgtttaaatagttttgttactttgcgaccc  20314800                                                                                    ------>MYB83                                             --------->GLK1(2)                      ------>MYB46(1)                                      --------->ANAC58                            <---------MYB59                                      --------->ANAC58       <-----------GT1      ------->GAMYB                                      --------->ANAC46   --------->AHL20(2)     -------->P      <-------TEIL            --------->ARR11(3)         <---------AHL20(2)    --------->WOX13(1) ----MYB59                    <---------ARR11(3) ----------->GT1       --------->AHL20(2)   aattcaaatgcataatccgattaaaacaataagatgtctcaagaaacaatctagtaaaatttataaccaaaaatgaaatatcaaccaaattagactctta  20314900  Previous    Next  AGI:  At1g54410.1    Description:  dehydrin family protein. similar to water stress induced protein [Brassica oleracea] (GB:AAS77419.1); contains InterPro domain Dehydrin; (InterPro:IPR000167) Range:  from: 20313442    to: 20314434    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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