Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    -------->HAHB4                  --------->YAB1                  <---------ICU4                  --------->ATHB12               --------->ANAC58                 --------->ICU4     --------->HSFB2a(2)                 <---------ATHB12   <---------HSFB2a(2)                 <---------YAB1 <----------DOF2  --------->ANAC58            --------->YAB1    <---------------AGL15         --------->ATHB51     --------------->AGL15         -------->ATHB1      ----------------->AGL2              --------->ICU4         <---------ICU4      ----------------->AGL3         --------->ANAC58             <---------WOX13(1)        --------->ICU4       ----------------->AGL1         --------->ANAC46    <---------ANAC58        <---------YAB1       <-----------------AGL3  --------->ANAC58      --------->At4g35610   --------->AtMYB61   <---------YAB1   <---------GLK1(1)   --------->ANAC58    <---------ANAC58 ------ICU4<---------YAB1    <-----------------AGL2  --------->ANAC58      <---------At4g35610   caagaccaccattattgtaatgattaccattaccctttttagaactctgtgaagcaagccctaagcaatacttagtttgctgtcttgtctgatttataag  20310300                                                          --------->ANAC58                                               ---------->DOF2                                            --------->ANAC58                                     --------->ANAC55(2)  --------->ANAC55(1)                                     --------->ANAC58     --------->ANAC46                        ---                                     --------->ANAC58     --------->ANAC58                       ----                                     --------->ANAC46  --------->TOE2(2)                         <---                                    <---------------------WRI1                                   <---                                   <-----------GT1     --------->TOE1(2)                        -----       ------->GAMYB          <---------ICU4--------->ANAC46                 --------->YAB1     <----      --------->MYB46(3)--------->YAB1      --------->ANAC58           ----------->GT1 <-----------GT1   cgcttccaacgacaaacaaaacacaaacataatcaattcacgaaacacacaaagaaacatacgcaagagaacaatgtaataacaaaaatttacattgaga  20310400            --------->HSFB2a(2)                        <---------ANAC58            <---------HSFB2a(2)                        <---------ANAC58 --->ZmHOX2a(2)                            <---------ZAT14                                          - ----->GLK1(1)                             --------->ZAT2                                           - ------GLK1(1)                             <---------ZAT2                                     ------- ---ZmHOX2a(2)                             --------->ZAT14                            ----------->GT1 ---->ARR11(3)                 <---------ICU4    ---------->DOF2                     --------------->AtSPL8 -----ARR11(3)                --------->ICU4<---------AtLEC2------->TEIL     <---------GLK1(1)-------   tctctcgtctagttcgcgaactgtgtttagtaatctttgtagctctgcagggaaagtgcttgcatctacatgaaattgaatttccgaattgtacaattaa  20310500                                                              --------->ANAC46                                                              --------->ANAC58                                                            --------->ZAT6                                                        ------>ZmHOX2a(2)                                                      --------->ARR11(3)                                                      --------->ARR14(2)                                                      <---------ARR14(2)              <---------------AGL15                   <---------ARR11(3)     ----------->RAV1(1)              --------->ICU4                       <---------TOE2(3)     --------->YAB1 -------->TOE1(3)           --------->AHL20(2)  --------->ICU4--------->ANAC58  --------->TOE2(3) -------->TOE2(3)           <---------AHL20(2)  <---------ATHB51         <---------ICU4      <------- -->AHL20(2)  --------------->AGL15  ---------->DOF2  ------->TEIL      --------->ICU4       <------- -->YAB1     ----------------->AGL3 --------->AHL20(2)<---------AGP1    <---------ATHB12     <-------   aaccctaaaattcgaactaattagagaaaatttatcaaataaagagagaaattatggatcttacactcaaggtaatcatcaacataaactccagttcgtg  20310600                            --------->ARR14(2)              --------->GLK1(1)                  --------->At4g35610                     <------ZmHOX2a(1)                *TSS        <----------DOF2     <---------ARR14(2)       --------->At4g35610              <----------DOF2 --ANAC58     ------>ZmHOX2a(2)                      --------->ZAT2                 --------->HSFC1(2) --ANAC58    <---------GLK1(1)                       <---------ZAT2                 <---------HSFC1(2) --ANAC46   --------->ARR11(3)    <---------YAB1     <---------At4g35610           ------->TEIL   caatagccatctttgatctctgatgaactggatttgattatggagcatagacttcagctaggatttcgaattgggattgagaacgaagcttttttttttc  20310700                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                  --------->ANAC55(2)                                                               --------->ARR14(2)                                                        <------------CBF                                                 ----------->RAV1(1)                                                 <---------ALFIN1 --------->ANAC46                <---------YAB1                 ----------->RAV1(1)<---------ANAC55(2)          <---------TOE2(3)               ---------->DOF2      <---------ARR14(2)         ---------->DOF2       ----------->GT1--------->PCF2<---------TOE2(3)   tcacgagttactaaagttatcaaaccatacatgggctaaaaactaaaagccccacaaacattgagattacgcaaaacattttaagcccaaaatgagccca  20310800                                                                                  --------->HSFB2a(1)                                                                                 ------->TEIL                                                                                --------->MYB52(1)                                                                               ------->GAMYB                  --------->AHL20(2)                                          <---------MYB55(2)             ----------->GT1                                              --------->MYB46(3)            --------->LBD16                                               <---------MYB52(2)<--------           <---------ANAC58                                               <---------MYB55(2)<--------           <---------LBD16                                        ----------->HVH21         ---------           <---------ANAC58            ---------->DOF2          --------->YAB1<---------MYB52(2)           <---------ANAC46       <---------TOE2(3)             <---------ICU4--------->MYB46(3)          <---------LBD16       <---------AHL20(2)       --------->bZIP60(1)--------->MYB52(1)   atagcattgttttgcgggaaaaaaatagcattgtttaatgaaaaagaaatggtattctgacttcattcatgacccagccaacgaacgttgtcaaaatatt  20310900                                                                                      --------->At5g28300                                                                                     ----------->GT1                                                                           --------->ANAC58                                             --------->ANAC58              --------->ANAC58 -AHL20(1)                                   --------->ANAC58<---------ANAC46     <---------AtLEC2<-- -ARR11(3)                          <---------ATHB12   <---------YAB1     --------->DAG2       ------ >AHL20(1)           <---------AHL20(2) <---------ATHB12  --------->ICU4 ---------->DOF2    ---------   caactcgacatcccattcgatattaaaacgatgttctaatcaatgaccagcaaaattgtcattatgtgtaagtaataaagcaatgcatggtaaaataaaa  20311000                                          <-------MYC3                                          ------->MYC3                                 --------->CCA1(2)                       ------->GAMYB                                <---------ARR11(3)                      <---------MYB52(2)                                <---------ARR14(2)                      --------->MYB46(3)                                --------->ARR14(2)                  <-------TEIL                                --------->ARR11(3)                 --------->CCA1(2)           ------   ---------->DOF2              --------->ARR11(1)                <---------ARR11(3)         -------- --------ID1       ----------->RAV1(1) <---------AtLEC2         --------->ANAC58            --------- ---->DOF2        --------->MYB46(3)  <-------TEIL              --------->ANAC58         ---------->DOF2 >AHL20(2)<---------ARR14(2)  ----------->ARR10             <-----------GT1      <---------AHL20(2) -   agaacaaaagaatatttggaaccacatagacgaagatatgtgcatgtgatgaaacaccaatttcacaagatacaacaaactatataaactcgaaagagtg  20311100                    <---------ARR11(1)                    --------->GLK1(2)                    --------->ARR11(3)        =============================================================================================     --------->AHL20(2)     --------->AHL20(1)     <---------AHL20(1)                                      <------ZmHOX2a(2)     <---------AHL20(2)                                      --------->CCA1(2)    <---------AHL20(2)     <---------TOE1(3)                --------->AGP1    --------->AHL20(2) <----------DOF2                      <---------ARR14(2) --------->AHL20(2) <---------ARR11(3)                      --------->ARR14(2) <---------AHL20(1) <---------ARR14(2)                      --------->ARR11(3) --------->AHL20(1) --------->ARR14(2)                      <---------ARR11(3)                  ----- <---------AHL20(2)<---------CCA1(2)                       --------->GLK1(1)                    <---- ----->GT1   ---------->DOF2        --------->MYB52(1)   <------ZmHOX2a(1)                  <-------- --->GT1<---------------AGL15----------->GT1         --------->TOE1(2)                      --------- >DAG2<---------AHL20(2)   <---------TOE2(3)--------->WOX13(1)                    --------->ANAC46 -------->AHL20(2) <---------ARR14(1)     <---------ATHB12 <---------GLK1(1)  --------->AtLEC2<------   aaataaattaatttttaaagcaaatctttaagggtaataaacgaatcattcagtacataggagatccaagaagaaactgcatgcacagaacaaattatat  20311200  Previous    Next  AGI:  At1g54390.1    Description:  PHD finger protein-related. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G24010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23491.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71661.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083) Range:  from: 20308247    to: 20310691    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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