Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                <<<<<                ------->TEIL                              <-----------------AGL2   ---------->DOF2               <---------CCA1(2)                        --------->ARR11(3)       --------->HSFB2a(2)          --------->GLK1(2)                             <---------ARR14(2)       <---------HSFB2a(2)          --------->ARR14(2)                           <---------CCA1(2)       --------->At4g35610  --------->AHL20(2)                               <-----------GT1             <---------At4g35610  < >YAB1    <---------ARR14(2)                  --------->AHL20(2)           <---------ARR11(3) -------   caaaaaatatagtatctgtatctaaaattcgataccattttctacagaataaataacatatctagttttggagtcaatttcttctgaaagaaaaaacaat  20273400       --------->YAB1      <---------YAB1  --------->TOE2(3)                                                   ----------->GT1 <---------ICU4                                                     <------ZmHOX2a(2) --------->YAB1                       <---------AHL20(2)          --------->At4g35610  ------>MYB83 -----ATHB12                         --------->ARR11(3)    <-------TEIL      --------->AHL20(2) <<<<ARR2                            <---------ARR11(3) --------->At4g35610  <---------AHL20(2) ---------ATHB12                     <---------AHL20(1) <---------At4g35610  --------->AHL20(1)     - -->WOX13(1)                  --------->LBD16      ---------->DOF2<---------At4g35610  ------>MYB46(1)   caaacattatcattttgcgaagaaacaaaacccagagtatatattttgaaccaaaaagagctgcattcagatcagaaaataaaatgacctacaaatctct  20273500                                             <---------At4g35610                                       -------->ATHB1                                       --------->YAB1                                       <------------ATHB5                              --------->ANAC58                              ----------->GT1--------->At4g35610                              --------->ANAC46                    <---------ANAC55(2)               -                  --------->ANAC58     <---------ICU4             <---------At4g35610              <-                  --------->ANAC58    <---------ATHB12            --------->ANAC55(2)           <----                ---------->DOF2<------ZmHOX2a(1)                  --------->At4g35610           -----       <----------DOF2        --------->ANAC58   ---------->DOF2  ----------->RAV1(2)      <---------ANAC46       <---------DAG2   <---------ATHB12--------->WOX13(1)      <-----------GT1      <---------TOE2(3) -------->AHL20(2)--------->ANAC46  --------->WOX13(1)   ---------->DOF2             <---------TOE1(3)   aaataaaaactttttcgaacaagcaaatcaacaggaaacaatcattcagcagaaagagagaaagtatcacctgatcaagaagagattagggtttcgagta  20273600            --------->MYB52(1)  <---------WOX13(1)             --------->TOE2(3)    --------->HSFC1(2)                     <------ZmHOX2a(1) -------->ATHB12   ----------->GT1            ---------->DOF2    ---------->DOF2       <---------YAB1 --------AHL20(2)---------->DOF2 --------->TOE1(3)    <---------HSFC1(2)        <------ZmHOX2a(1) -----ARR14(2)--------->ANAC58<---------GLK1(1)      --------->ANAC58          ----------->GT1 ---->ARR14(2)--------->ANAC58--------->GLK1(1)      --------->ANAC58   >>>>>>>>>TBF1  <---------ANAC55(2)   tttgattgaaggaagaacggaaagaaaaatggaaaccctaaattcggacaaaggcaagcttctgtctgaaagaagaagaagaggaaattacgagaggaag  20273700                                                                                     --------->ANAC58                                                                                     --------->bZIP60(2)                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                                                    --------->SPL7                                                                                   <---------ALFIN1                                                                                  <------NtERF2                                                                                 <---------DEAR3(2)                                                                          *TSS --------->RAP2.6(3)                                                     --------->AHL20(2)   <------NtERF2                            --------->MYB46(3)      <---------AHL20(2)  <---------DEAR3(1)<------NtERF2                   <---------AHL20(2)   <----------DOF2           --------->YAB1<---------DEAR3(1)   agctacaaaatcgaacaagttttaattcgaaccaatattcttctttttttatattttaaatcggcaaataatagtcggcgagtcggcacggcatcgattc  20273800                                  <---------ANAC55(1)                                  --------->ANAC55(1)                              <---------GLK1(1)                          <---------HSFB2a(2)                          --------->HSFB2a(2)                    <---------------AGL15                    <----------DOF2                   <-----------------AGL3                <---------ANAC55(1)                                           ---------->DOF2                --------->ANAC55(2)  <------------CBF                   <---------ANAC58                <---------ANAC46  <---------ANAC55(2)                   ----------->GT1                <---------ANAC58  --------->ANAC55(2)                   <---------ANAC58                <---------ANAC58 <-------TEIL                        <---------RAP2.6(2)          ---     <---------ATHB12    <---------LBD16                            <---------At5g28300          <---  <---------ALFIN1 <-----------------AGL1         ---------->DOF2  <-----------GT1              <----   cctcccactcatctagttgcgtctttatctggaaatacgtattgggccttaacaaagcccaaatatttgttacggcgtaacaaagcccaactaaatggag  20273900                        <---------ZAT2         --------->GLK1(2)       <---------At4g35610                                                   <---------At4g35610       --------->GLK1(1)--------->ZAT2                         <------ZmHOX2a(2)      ----------->ARR10--------->ANAC58                  ------>NtERF2<---------DAG2  ------>NtERF2 -------->HVH21        --------->AtLEC2           <---------MYB46(3)  <----------DOF2--------->ANAC46 ---NtERF2--------->At4g35610---------->DOF2 <---------ATHB12 <-----------HVH21<---------MYB46(3)   < -----At4g35610        --------->ANAC58 <-----------GT1 --------->ANAC46     <-------GAMYB  <------ZmHOX2a(2)   ccgatggggagatgctgaaatcgccaagcagagaagcccaaattacaatcagttgttcccgcccgatcacctctttttcagttgttcccgcccgatcaac  20274000                                                                                              -------                                                                                              <------                                                                                              -------                                                                                           ------>ZmHOX2a(1)                               --------->MYB46(3)                                      --------->ARR14(2)                          --------->ANAC46                                             <---------ARR14(2)                         ------>ZmHOX2a(1)                <----------DOF2           <---------ANAC58                     --------->ARR14(2)            --------->REM1(1)                <---------ANAC58 --------->HSFB2a(2) <---------ARR11(3)           <-------TEIL              <---------MYB52(1)<------ <---------HSFB2a(2) <---------ARR14(2)        --------->At4g35610         <-------GAMYB   <---------At4g35610 ---------LBD16--------->TOE2(3)               <---------At4g35610        <-----------RAV1(1) -------   tctctggaattacttagcctcaaaatcctcacaacaactcttctcttgtagctacatctactttgctcttccctctctgttgtctcgcgtttcctctgct  20274100    <---------ZAT18 <---------ANAC46 <---------ANAC58             <----------DOF2 <---------ANAC58     <---------MYB52(1)   <---------AHL20(2)                                   ----- -->ZAT2         <---------MYB52(1)        <---------ICU4                                 <---------TOE1(3) ---ZAT2       <---------ANAC58            --------->AHL20(2)                     <---------TOE1(3) -->ZAT14 <----------DOF2  ---------->ID1 --------->ICU4                          <---------TOE2(3) ---At4g35610  <---------ANAC58   <----------DOF2                         >>>>>>>>>TBF1   <---------TOE2(3) -->At4g35610 ---------->ID1  --------------->AGL15                --------->At4g35610<----------DOF2   gtctcgtgctctctttttcgttctgttttgttctttctttagtaattttttcagatagttttaagtctcttctgaagaagaattagggttttagggttta  20274200                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <---------ARR11(3)                            --------->ARR11(3)                            <---------AGP1                            --------->AGP1                    <------MYB83               <---------AHL20(2)              <---------AHL20(1)                <---------------AGL15              <---------ARR11(3)                --------------->AGL15              --------->AHL20(1)          <-------TEIL              <---------AHL20(2)      <---------TOE2(3)                       <---------At4g35610  --              --------->AHL20(2)      <---------TOE1(3)                   <-----------TGA1       <---              --------->ARR11(3)      <---------YAB1             --------->MYB52(2)              ----   <---------GLK1(2)<------MYB46(1)--------->AHL20(2)            <---------MYB46(3)       <---------TOE2(3) ------>GT1  --------->AHL20(2)    <---------AHL20(2)          <---------MYB52(1)   <<<<<<<<<TBF1<---   gaaaaaattctctaaatatatttggttttagatctaatttaagattcattcacaaaatagaaaacgtttgtttcttcgtcatcttcttcttcaacgttgg  20274300  Previous    Next  AGI:  At1g54290.1    Description:  eukaryotic translation initiation factor SUI1, putative. Identical to Protein translation factor SUI1 homolog 2 [Arabidopsis Thaliana] (GB:Q94JV4); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT4G27130.1); similar to Protein translation factor SUI1 homolog (Translation initiation factor nps45) (GB:Q9SQF4); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950) Range:  from: 20272152    to: 20273774    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version