Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ZAT14                                                           --------->ZAT18            <---------DAG2                                                       <---------TOE2(3)              <----------DOF2                                                 --------->ZAT18                      =============== ->MYB46(3)                                      <---------ZAT18             ---------->DOF2 --GT1                     <---------TOE2(2) --------->ICU4--------->ZAT14   ========================   ttgagttttgtttttgtagttcttaaacacaggtttatatggttgtaatggtgaactaatgttcactgttttgttcataaaaagatagcttttttttttt  20263000              ====================================bZIP_DOF              <---------ANAC55(2)              <---------ANAC46                       --------->DAG2              <---------ANAC58                      ---------->DOF2              <---------ANAC55(1)               --------->TGA2(2)              --------->ANAC55(2)              <-----------TGA1              ====================================bZIP_DOF              <---------ANAC58                --------->ANAC58              --------->TGA1a                 <---------bZIP60(1)              <---------bZIP60(2)             --------->bZIP60(1)              <---------TGA1a                 --------->bZIP60(2)       ---------->DOF2              <---------O2                    --------->REM1(1)      <---------HSFB2a(2)              --------->O2                    --------->ANAC55(2)    --------->HSFB2a(2)  ---------->DOF2             ----------->STF1                 <---------ANAC55(2)  --------->At4g35610  --------->HSFB2a(2)           ----------->TGA1                   --------->ANAC58    --------->ALFIN1      <---------HSFB2a(2) =======================bZIP_DOF       <----------DOF2       ---------->DOF2       <----------DOF2 =======================bZIP_DOF<---------YAB1--------->ANAC46 --------->DAG2<---------KAN4(2)      -   ttgctaaaaaacaatgacgtgtctatggagtcttgtgaatgctttgctacgtcataaagcatcaaaaggtgctggaaagaataagcttttccaaaagaaa  20263100                                    <---------SPL7                                   <---------ANAC58                                  <-----------------------TaNAC69(2)                           <------MYB46(1)--------------->AtSPL3          <-----------GT1 --------->MYB46(2)      --------->ZAT6     <----------DOF2      --------->MYB59 --------------->AtSPL8 <------MYB46(1) --------->AHL20(2)<---------ANAC46 <------MYB83<---------YAB1<------MYB83   <---------------AtSPL8 <-----------GT1              <------ -------->MYB59  <---------AHL20(2)<---------ANAC58         --------->YAB1              <---------YAB1   atttggtctttttttctaattaaaaagtttggtattggcgtatggaagtacaacactactactcatatttccacttgaaaacaacattttgtgattgtga  20263200                                                                                      ------------>CBF                                                                                  <------MYB83                                            --------->YAB1                        <------MYB46(1)                                        <---------ICU4                         <------------CBF                                       --------->ICU4                    --------->ARR11(3)<---------ARR11(3)              <---------ANAC46         <---------YAB1            ----------->GT1<---------WOX13(1)            <---------ANAC46         --------->YAB1              <---------ANAC46 ----------->GT1            <---------ANAC58        <-------TEIL            <------------CBF  --------->ATHB12<------            <---------ANAC58    <---------ANAC58         <<<<<<<<<<<<<<<<<LFY<---------YAB1<---------AHL20(1) ---YAB1 <-----------RAV1(1)    <---------ANAC58     <----------DOF2     <-----------GT1   --------->AHL20(1)   tttgatattttctggtgtgtgttagtatgcaattgcgattcattattcatagtctcttttgacattggtgtaaaataacttgattggtaacaatattttc  20263300                   ---------->DOF2              ----------->GT1             --------->DAG2            ---------->DOF2        <---------TOE2(3)  --------------->AGL15  <---------------AGL15                        --------->DAG2        --------->DAG2 <-----------------AGL1             --------->TOE2(3)      *TSS     ---------->DOF2 <-----------------AG             --------->ARR11(3)     ---------->DOF2                       ------ <-----------------AGL2           <---------ARR11(3)    <------ZmHOX2a(1) ----------->GT1     ------- -----GT1 <------ZmHOX2a(1) ----------->GT1   ---------->DOF2--------->ALFIN1      <---------AHL20(2)   cctactagtttaggaaaagtataaagaggtgagaaaaatctcaaatcgaaaaggaagaggaaagtgggggtaaagttggaaatataaaaattttggaaaa  20263400                                                              --------->ANAC55(2)                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->ANAC58                      --------->TOE2(3)                       <---------ANAC55(2)                 <--       --------->YAB1 --------->TOE1(3)                       --------->ANAC55(1)             <------ --->DAG2       <------ZmHOX2a(1)    --------->ALFIN1    ----------->HVH21                    ------- --->DOF2 ---------->DOF2        ---------->DOF2  <-----------GT1     <-------GAMYB    --------->TOE2(3)   gtagaacaattagaaagaggaaaaccctaaaaaaaaaaagagggggactatataactggctaacacgtattgggttgagtctctctctacctcaatttat  20263500                                            --------->HSFB2a(2)                                   <------ZmHOX2a(2)                                   --------->CCA1(2)                                  <---------ARR14(2)                                  --------->AGP1  --------->GLK1(1)           <----------DOF2                                  --------->ARR14(2)                  --------->ARR11(3) -------AHL20(2)             ----------->RAV1(1) <---------ARR11(3)   <---------ARR11(3)            < ---AHL20(2)                <---------ALFIN1<---------HSFB2a(2)   ---------->DOF2       ---------->DOF2 -->AHL20(2)      <----------DOF2 <---------ARR11(3)     <---------ARR11(3)   <---------DAG2 <-------   attatttgcttcaatcttctctttatcgctccaccagatccaagttcgcgagatttcaagctctctaacaaagttcttcacttttactctcaaagctttc  20263600                                    <---------AHL20(1)                                    --------->AHL20(1)                                    <---------ARR11(3)                                    --------->ARR11(3)                              ----------->GT1                            <-------TEIL                                                ------>ZmHOX2a(2)                         --------->HSFB2a(1)                                          <---------ARR14(2)                         --------->HSFC1(2)                                           <---------AGP1                         <---------HSFC1(2)                                           --------->ARR11(3)                         <---------HSFB2a(1)   <---------DAG2                         --------->ARR14(2)                        <---------TOE1(2)      <----------DOF2             <---------YAB1 ----------DOF2   <---------At4g35610       <-----------GT1        <----------DOF2   <---------CCA1(2) ---DOF2          --------->At4g35610  <---------AHL20(2)      ---------->ID1   --------->ATHB12   <-   atctttcattcaactacttaagctccaaggttcggaaatattttttttacttttctctgcgatttgttccttttcttatgaacgattggatctcgagtct  20263700                                                                                        --------->LBD16                                                                                       ----------->GT1                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                               --------->WOX13(1)                                                                           <---------ARR14(2)                                                                       <---------At4g35610        <----------DOF2    --------->HSFB2a(2)                     <-----------HVH21   <---------ANAC58 <-----------GT1           <---------HSFB2a(2)                     <-----------TGA1    <---------ANAC55(2) --------WOX13(1)         <---------LBD16                    <---------YAB1--------->ARR14(2)   gatttactctctttgcgatggaatttgttctgggtcgttttcaaaattgacgcttgttaatctataattcgtcatcggattcaattagtccgtgaaaccc  20263800                                   <---------YAB1                              <------MYB46(1)                              <------MYB83                             <---------AtMYB61                           <<<<<<<<<MYB98           <<<<<<<<<MYB98      <---------CCA1(2)           --------->TOE2(3) --------->MYB59      ----------->GT1    <----------DOF2            <----        <---------CCA1(2)  <---------MYB52(1)     <---------YAB1---------->DOF2             <--------   ttcaattcgtttatctcaaatcgatttgggttaggttttgatttcgacacttatgttaaaatcatccaaagcttttatcttcgattttggacaactttgt  20263900  Previous    Next  AGI:  At1g54270.1    Description:  EIF4A-2 (eukaryotic translation initiation factor 4A-2); ATP-dependent helicase. Identical to Eukaryotic initiation factor 4A-2 (TIF4A-2) [Arabidopsis Thaliana] (GB:P41377;GB:Q0WWK5); similar to EIF4A1 (eukaryotic translation initiation factor 4A-1), ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT3G13920.1); similar to EIF4A1 (eukaryotic translation initiation factor 4A-1), ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT3G13920.2); similar to EIF4A1 (eukaryotic translation initiation factor 4A-1) [Arabidopsis thaliana] (TAIR:AT3G13920.3); similar to Eukaryotic initiation factor 4A-2 (ATP-dependent RNA helicase eIF4A-2) (eIF-4A- Range:  from: 20263359    to: 20265933    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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