Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                        --------->GLK1(1)                                                                               <---------bZIP60(1)   <-------GAMYB                                                               <---------ANAC46    ==  --------->MYB52(2)                                --------->WOX13(1)         <---------ANAC58------  ------>ZmHOX2a(2)         --------->DAG2       <-----------HVH21             --------->bZIP60(1) <-  <---------MYB46(3)       <---------ZAT14    <---------At4g35610              <---------ANAC58<----- <------ZmHOX2a(2)         --------->ZAT14    --------->At4g35610  --------->AHL20(2)  <---------AGP1 -----------ARR10          ---------->DOF2------>ZmHOX2a(1)    --------->AHL20(2)      --------->ARR14(2) ---------ARR14(2)     <------NtERF2<---------HSFC1(2)         <---------AHL20(2)      <---------ARR11(3) -------->ARR14(2)   <---------ANAC46    --------->TOE2(3)     --------->AHL20(1)      <---------ARR14(2) ------ANAC46     --------->ANAC46  --------->HSFC1(2) --------->YAB1       --------->ALFIN1--------- -----LBD16      <---------LBD16----------->GT1 ------->GAMYB --------->AHL20(2)       --------->ARR11(3)   cggatcgttgcagcattctcacggcgtagtaaagtggaaacatccttcaactgtcaattacaaaaaaaattaaaacaagtggcgttacagatctcaatca  20253600                                                                       <---------ANAC58                                                                       <---------ANAC46             ----------->HVH21                                         <---------ANAC58      --------->ANAC58             --------->YAB1            <-----------GT1      --------->ANAC58            <---------YAB1       --------------->AGL15 ---ATHB12 --------->ZAT2        --------->ARR11(3)    <---------------AGL15                       <- ======================================================================MADS_MADS                   -- --->YAB1  <---------ZAT2        <---------ARR11(3)   =============================================== --------------AGL15 ---------->DOF2                  ----------------->AGL3 --------->ANAC58     <-- ----ICU4  --------->At4g35610  --------->YAB1        <-----------------AGL3 --------->ANAC58   <---- >WOX13(1) <---------At4g35610 <---------ATHB12       <-----------------AGL2 ----------->GT1  <------   tctctaagaagcaagctgacacataaatcacaaatgatcatagagctctaaatctagctaattttagcacattgctcgtaagtaaaaacaattctagatt  20253700                    ---------->DOF2        --------->At4g35610        <---------At4g35610 <---------YAB1   --------------->AGL15            ----------->GT1 ----------GT1    <---------------AGL15            <---------ANAC58 ------->YAB1     --------->HSFB2a(2)              --------->ANAC55(2)               ---------->DOF2 =================================MADS_MADS        <---------ANAC58             ----------->GT1 -------YAB1      <---------HSFB2a(2)              <---------ANAC46            ----------->GT1 -----ICU4------->GAMYB    ---------->DOF2         <---------ANAC55(2) --------->At4g35610 ---GLK1(2)      ----------------->AGL2    <-----------------AGL1     ------>ZmHOX2a(2)             -   attacaattcaactgaatttctaaaagcagaaagaattcgtcataacccaatttcgtaatatcaatactcgatcgctgaagaagataaaaagataacaaa  20253800                                                        <-----------HVH21                                                       <---------ANAC46                                                       <---------ANAC55(1)                                                       <---------ANAC55(2)                                                       --------->ANAC55(2)                                                       <---------ANAC58                                                       <---------ANAC58                                                   -------->HAHB4                                                  <---------ATHB12                                                  --------->ICU4  --------->ANAC46                                              <---------YAB1--------->ANAC58                                            --------->ATHB12--------->ANAC58                   <-----                                            --------->YAB1  <---------ANAC46            <---------YAB1       <------ZmHOX2a(1)                   <---------YAB1----------->TGA1   --------->ZAT18    <-----      ----------->GT1        <---------MYB52(1)  <---------TOE2(3)--------->ANAC58   <---------MYB52(1) ------->TEIL           ------------>MYB.PH3(1) --------->YAB1    --------->ANAC58 --------->YAB1 -------->MYB52(1)  <---------HSFB2a(2)    --------->ICU4----------->HVH21  <---------ZAT18  <-------   atgaacggaggaaaaatgtaatcgagaaacagttaccttcttggaatgattaatgatgcgtgacgcataagccattgatgcactatcgttacgattttcg  20253900                                                                             <---------HSFB2a(2)      <---------------AGL15                                                  *TSS    --------->At4g35610                                                      --------->HSFB2a(2)    --------->ZAT2                                                        <-----------GT1    <---------At4g35610                                                  <---------YAB1    <---------ZAT2                                                     <---------ICU4 ----ANAC58                        <---------DAG2                    <----------DOF2          ------- ----ANAC58                >>>>>>>>>TBF1                         ---------->ID1             <-------- ----GT1     ----------->GT1       <----------DOF2              <-----------GT1   <------------CBF   tttcgcagctctaactagtaactatggaagaagaaaactttttggtttggactgtttagttttttttttctctttattactagaaattgtttttttgttg  20254000                                                                 --------->SPL7                                                                <<<<<<<<<SPL5                                                                <<<<<<<<<SPL4                                                            <------------------SPL14        ---------                                                            <------------CBF                -------->HAHB4                                                           <---------ICU4                  <---------YAB1     <----------DOF2                              --------->At4g35610                    --------->YAB1   --------->At4g35610                     <----------DOF2 --------->ATHB51             <---------AHL20(2)   <---------ZAT2                          <---------DAG2 <---------YAB1        --------->At4g35610   --------->ZAT2                     <---------TOE2(3) --------->YAB1<---------ETT(2)  --------->AHL20(2)   <---------At4g35610         <------------CBF --------->YAB1  <<<<<<<<<SPL1   <---------At4g35610 --->ID1 <---------YAB1   --------->At4g35610  <---------YAB1<---------------AtSPL3   <----------DOF2 ---RAV1(1)              ----------->GT1<------ZmHOX2a(1) --------->ICU4     ---------->DOF2---------   ctctcagctttctgatttaccaagagacagcaaaattgttaaggactttatcatcggagcataattgtacggtcgagattaaagctgactttaattatag  20254100                          --------->YAB1                       <-------GAMYB           --------->DAG2                   <------ZmHOX2a(1)                           --------->ZAT2         ===============                 <---------TOE2(3)  <---------ATHB12   --------->ARR11(3)             ---------->DOF2          <-----------------AGL1------------>CBF     <---------YAB1        ---------->DOF2    <------ZmHOX2a(1)  --------->YAB1--------->YAB1--------->YAB1        --------->AHL20(2) >YAB1  --------->ANAC58  <---------ICU4     --------------->AGL15       <---------AHL20(2) >ATHB12--------->ANAC58 <---------YAB1 <------------CBF       <---------ZAT2        *TSS  --------->LBD16   gcctgaggacaggcccattaaggacttataatggcccaatcgtattgctatatttatgattttgcagttgggaaattaaaagaagtagaaaagcgggaaa  20254200                          --------->TGA1a                          <---------O2                          <---------TGA1a                          --------->O2                       ----------->HVH21                           ---------->DOF2                       --------->DEAR3(1)                 ------>ZmHOX2a(2)           <---------ANAC46                              <------ZmHOX2a(2)           <---------ANAC55(2)                          --------->ARR11(3)           <---------ANAC58                             <---------ARR14(2)           <---------ANAC58                             <---------ARR11(3)                <----------           <---------ANAC55(1)                          --------->ARR14(2)               <-----------GT1           --------->ANAC55(2)                          <---------ARR14(3)        <---------AHL20(2)         <-----------GT1------>NtERF2                   <---------AGP1----------->GT1 <---------ICU4 ===================================bZIP_DOF            --------->ARR14(3)       --------->AHL20(2)<-   cagagaattagttacgtcttcttctccgacgagacgactgcgattgagtttttttgaagatctcaaattcaaaggtatatagatttaatatttatcttct  20254300                                       <------------------------ANAC81                                   --------->ARR11(3)                                             ---                                   --------->GLK1(2)                                      --------->GLK1(2)                                   <---------ARR11(3)                                    <---------ARR14(2)                            --------->YAB1                                               <---------GLK1(2) --------->AtLEC2         <---------KAN4(2)                           --------->HSFB2a(1)--------->ARR14(2) -GT1       ----------->HVH21  --------->YAB1    <----------DOF2     ------->TEIL      <---------ATHB12 --------AtLEC2      --------->ANAC46 <----------DOF2           --------->CCA1(2)--------->ZAT18  <--   tccatggaaaccgaatgacatttacgcgaatgatcaaaatctttatttcttcttttgttttttcagagacgagccttcttaagtggccaaggattctgaa  20254400                                      --------->ARR11(3)                                     --------->GLK1(1)         --------->At4g35610    ----------->GT1         <---------ZAT2         <---------ANAC58         ----------->RAV1(2)    <---------ANAC46                                     <---------AHL20(2)         --------->ZAT2         <---------ANAC58                                     --------->AHL20(2)         <---------At4g35610   <-------TEIL            --------->TOE2(3)        <---------YAB1------>NtERF2      <---------At4g35610<---------LBD16         <----------DOF2          --------->ATHB51   -------- ------>ARR11(3)        ------>ZmHOX2a(1)  <---------TOE1(2)              <---------ICU4     -------- -------ARR11(3)    --------->ARR14(2)<---------ARR11(3)                 --------->ICU4      --------   gatagttcatcagctgcgaacgattcctctgggttcgtgaaatcttgggttctttaatctcaaatccaaaatggcataatttctgattaaaatcgacgcc  20254500  Previous    Next  AGI:  At1g54220.1    Description:  dihydrolipoamide S-acetyltransferase, putative. Identical to Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q5M729;GB:Q8L787;GB:Q94IP5;GB:Q9SLL0); similar to dihydrolipoamide S-acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT3G13930.1); similar to unknown [Populus trichocarpa] (GB:ABK95559.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Catalytic domain of components of various dehydrogenase complexes; (InterPro:IPR001078); contains InterPro domain Dihydrolipoamide acetyltransferase, long Range:  from: 20249797    to: 20253977    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g54230.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G54240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65323.1); contains InterPro domain Histone H1/H5; (InterPro:IPR005818) Range:  from: 20254185    to: 20256032    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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