Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ----------->GT1                                --------->WOX13(1)                 <---------AHL20(2)                       --------->TOE1(3)                          <---------AHL20(2)                       --------->TOE2(3)                          --------->AHL20(2) <---------At4g35610                      ----------->RAV1(2)                      -------->HAHB4        <---------ZAT2                  <---------MYB52(2)                           --------->ATHB12      --------->At4g35610                 --------->ANAC46      --------->YAB1          ----------->GT1       --------->ZAT2  <-----------GT1--------->ANAC58     <---------ATHB12        <---------YAB1      ---------->DOF2 ---->DEAR3(1)   --------->ANAC58   --------->WOX13(1)        --------->ICU4  <----------ID1 -NtERF2 ------>ZmHOX2a(1)    <---------YAB1                --------->YAB1  ---------->DOF2   gattaaacttcctctcaccaagtaacctgaacatcattcaatcagaaaattgtctcagacaaaaatgattaaatgtaaaaaagacaaagctgagtttttt  20248800                                                                       <---------YAB1                                                                       --------->ICU4                                                                     --------->YAB1                                                                    <---------YAB1                                                                  --------->YAB1                                                                  -------->ATHB1                                                                  <---------ICU4                      <-----------RAV1(2)                        --------->ICU4                      --------->YAB1         --------->REM1(1)   --------->AHL20(1)                    --------->GLK1(2)   --------->ANAC58         <---------YAB1                --------->YAB1          --------->ANAC58         <---------AHL20(2)          --------->At4g35610         ---------->DOF2  <---------GLK1(1)  <---------YAB1          <---------At4g35610--------->GLK1(1)         --------->GLK1(1)--------->YAB1          <---------ZAT2     <---------GLK1(1)    <-----------GT1--------->AHL20(2)        ----------      <-----------HVH21  <------ZmHOX2a(1)  <-------TEIL       --------->YAB1 ------>ZmHOX2a(2)    --   ttctcaaatgtcagctaataagaatcaggagaaatctcagaaaagctacattttccgatatccaaaaattattatgatgatccaatacagaagatgaaaa  20248900                                                                                          <----------                                              ---------->DOF2                            <------ZmHOX2a(1)                                          ---------->DOF2                               <----------ID1                                       --------->LBD16                                --------->DAG2                                      <---------HSFC1(1)                             ---------->DOF2                                      <---------HSFB2a(2)                    ------>ZmHOX2a(1)                                      --------->HSFB2a(2)                   --------->TOE1(2)    ------->TEIL                      --------->HSFC1(1)                   =====================HOX2a_HOX2a ->GT1                               <---------LBD16                     --------->ARR11(3) ------->MYB52(1)                  <---------ARR14(2)      ----------->GT1 ------>ZmHOX2a(2)  -------   aaaacgaacttaatataaaccctaagacgatgagagggttctggaaaagaaagcgattaagaagaaaaaactattgatcctgagagaaaaaggacgaatt  20249000   ----------->GT1            --------->AHL20(2)                                   <----------ID1 -----------WRI1       <----------ID1      --------->DAG2                    ---------->DOF2   ------ >TEIL             ---------->DOF2        ---------->DOF2        <---------At4g35610      -----------   tttcagagtaaaatcaaacgagaaagggacaaaaaaatcaccagaaaagttgttcaaagaaacttgcctctgagatagagaaagagagacaaaatgagaa  20249100                                         --------->MYB52(1)                                ------>NtERF2                           <-------TEIL ----------->HVH21                          --------->ARR14(1)                          --------->CCA1(2)                          --------->GLK1(2)                         --------->ARR11(1)                        <---------MYB52(1)                         --------->ARR14(2)                       <-------GAMYB                         <---------ARR14(2)                   <----------DOF2                 <---------ANAC58      --------->DEAR3(2)    <---------ANAC58            ---------->ID1                 <---------ANAC58    <---------WRKY18(1) <---------ANAC58            <----------DOF2                 ----------->RAV1(2)----------->HVH21    <---------ANAC58          ---------->ID1 ---------->DOF2 <---------ANAC46  <-----------HVH21   --------->GLK1(2)  <---------TOE2(3)   *TSS ---->DOF2  --------->ATHB12  ----------->HVH21       <---------GLK1(2)   <---------TOE1(3)<--------- ------------->ANAC81    <---------GLK1(2) <---------ANAC46  <---------ANAC58     <-----------GT1 ---   agagaaagagagaaagattgcctgagagattcgcgaccgtgaccgacgggaagagagattcttgctttcgttgtctaacgtttttttctttttctttttg  20249200                       <---------AHL20(2)                      <---------YAB1                                                    --------->YAB1               --------->AHL20(2)                                                       -------->HAHB4               <---------AHL20(2)                                                       <---------ICU4               <---------AHL20(1)                                 <------------CBF     <---------YAB1          <---------AHL20(2)                                    <---------AHL20(2)     <---------ATHB51          --------->AHL20(2)                                    <---------YAB1         --------->ICU4          --------->AHL20(1)        <---------ANAC58         <---------RVE1(1)        <---------AHL20(2)          <---------AHL20(1)        <---------ANAC58        <---------GLK1(2)        --------->YAB1    ------------>CBF<---------AHL20(2)               --------->At4g35610            <---------YAB1  ------>ZmHOX2a(1)<---------AHL20(2)  --------->ARR14(2)   --------->ARR11(3)     --------->AHL20(2) -DOF2   --------->AHL20(2)       <-----------GT1    <---------At4g35610 <---------AHL20(2)      ---- ------>ARR14(2)   --------->AHL20(2)  <---------ARR14(2)   <---------ARR11(3)    --------->CCA1(2)   gttcctctcaattttattttatttattatttgtttatttcgtttccgacgaagttagctgaagatttttattgatttttttgggatataataatggctga  20249300                                                               <---------AHL20(2)        <---------AHL20(2)                                     --------->AHL20(2)       <---------YAB1                                         --------->AHL20(2)                    -  <---------RVE1(1)                                        <---------AHL20(2)                   -----  <---------CCA1(1)                                        --------->AHL20(2)                -------- --------->AHL20(1)                                        <---------AHL20(1)            --------->ATHB51 <---------ARR11(3)                                --------->MYB52(1)--------->At4g35610 --------->ATHB12 <---------AHL20(1)                          --------->At5g28300--------->WOX13(1)      <---------YAB1 --------->ARR11(3)                         ----------->GT1--------->AHL20(1)           --------->ICU4 ------>DOF2                         --------->TOE2(3)    --------->AHL20(2)           --------->TOE2(3)   aaagatatttttaatggatttagacttaaaactgtgtaacataaaactgtgaataactgaataaattaatcagataactatgtatgaaacattattgata  20249400                --------->TOE2(3)               <---------ICU4               --------->YAB1               --------->ATHB12      ----------->GT1                                             --------->ARR11(3)       ----------     --------->YAB1                                              ============================HOX2a_HOX2a  --------->WOX13(1)                                             <------ZmHOX2a(1)       --------->ANAC55(2) --------->AHL20(2)                                            <---------TOE2(2)         <---------ANAC55(2) <---------AHL20(2)                                            <---------TOE2(3)      <------ZmHOX2a(2) -------->AHL20(2)               --------->ICU4              --------->TOE1(2)      <------ZmHOX2a(1) ---->AHL20(2)<---------ATHB12--------->AHL20(2)     <------ZmHOX2a(1)            <---------TOE2(3) ->YAB1       --------->ICU4  <---------AHL20(2)   <---------TOE2(3)          <----------DOF2     ---   aaataaatcagaaaaaatcattaaacccataaataaatatgagattgagtatttaggaaaaaacttaggattttgttttgcatttaggatcaagtgacat  20249500                            <-----------GT1                      --------->ANAC58<---------ARR14(2)                      --------->ANAC55(2)                      <---------ANAC55(2)                      ----------->GT1<---------MYB52(1)                                             -                      --------->ANAC55(1)   <---------MYB52(1)                                      <                 --------->YAB1    <---------ANAC58                                              <---             --------->MYB46(3)<----------DOF2                        --------->TOE2(3)<----------DOF2             --------->KAN4(1)<---------ANAC58                     ----------->RAV1(1)<---------ANAC58      ------->TEIL    --------->ANAC58--------->ARR14(2)  --------->YAB1--------->AHL20(2)  <-------- ->HVH21     <---------HSFB2a(1)   <---------ANAC58      <---------ATHB12<---------AHL20(2) --------- ------>YAB1<---------KAN4(2) <---------ANAC58    <----------ID1--------->YAB1        <---------ANAC58   tcagaatgtatcggaacaatcgaaacgtaatttctttccgtttcccgttattgagacaaatcaaaatcacaacattaatttgtttctggctttctgctac  20249600                         <---------AHL20(2)        --------->ANAC46  ----------->GT1       --------->AHL20(2)         --------->ANAC58                             ----- ------>MYC3          --------->YAB1               --------->ANAC58                          <------MYB46(1) -------MYC3      ----------->GT1         <---------WOX13(1)                                 <------MYB83 ------ALFIN1    <---------ATHB12       --------->ATHB12                                   <---------WOX13(1) -At4g35610 >>>>>>>>>>>>>>>>>LFY       <---------YAB1                 --------->YAB1 --------->YAB1 >At4g35610 <<<<<<<<<<<<<<<<<LFY     <----------DOF2            <-----------GT1     <---------YAB1   cacatggaaaaaaaccccaatggataataaatagagtgactttgattgaatacaagcagtttttttttacaacaataaacaagactataatggattggta  20249700  Previous    Next  AGI:  At1g54217.1    Description:  Expressed protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26060.1); similar to unknown [Picea sitchensis] (GB:ABK23978.1); contains domain PTHR10052 (PTHR10052); contains domain PTHR10052:SF2 (PTHR10052:SF2) Range:  from: 20247588    to: 20249194    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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