Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ------->TEIL                                                   --------->ANAC46                                                   --------->ANAC58                                                   --------->ANAC55(2)                                                   --------->ANAC58                                                 <-----------GT1                                                <---------ARR14(2)                                                --------->ARR14(2)                                              --------->ARR11(3)                                              <---------ARR11(3)     ------>ZmHOX2a(2)                        --------->AHL20(1)   <---------AGP1                      --------->ANAC58               --------->AHL20(2)  <---------CCA1(2)                    --------->ANAC58       --------->ICU4 ->TOE2(3)                     <-------GAMYB --------->AHL20(2)     ------->TEIL    >>>>>>>>>>GT-3b ->TOE1(3)         <---------AHL20(2)  --------->ANAC46 ----------->GT1<---------YAB1      ---------- ->YAB1      ----------->GT1   <---------ANAC46--------->CCA1(2) <---------YAB1 --------->YAB1   ----   acttggatctaaattttgtaatttatctgtgtgagttgtatacgaaaatatatacgcatcgataaatatgaatattatagaataagaaaaatatggaaaa  20239000                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(2)                                                    ------>ZmHOX2a(1) <---------ANAC58           ----              <---------TOE2(3)                     <---------------AGL15                        ----              <---------TOE1(3)          <-----------GT1         <---------ICU4                  <---             <---------DOF5.7(2)      <---------AHL20(2)        --------->ICU4                   <---             <-----------GT1         <---------AHL20(1)     --------->ZAT18                     <----            <-----------GT1          --------->AHL20(2)     <---------ZAT18                 <--------     --------->ANAC55(2)       --------->TOE2(3)    --------------->AGL15    <---------YAB1<---------   <-----------GT1         --------->ETT(2)         ================================================= ->GT1     <---------AHL20(2) --------->REM1(1)    --------->TOE2(3)<-----------GT1   <----------DOF2 ----->AHL20(2)       <----------DOF2<---------AHL20(2) <---------ICU4<---------ANAC55(1) <----------   aaaattcacttaatttaacgttttctttgtctacatcaatttttttctatattcctaaaaattgcacttattacgttttatttttgtgctttgacttttc  20239100 ----->HSFB2a(2) ----->HSFC1(1)        --------->AHL20(2) ------HSFB2a(2)       <---------AHL20(2) ------HSFC1(1)       <---------AHL20(1) -----LBD16           <---------AHL20(2) --DOF2---------->DOF2--------->AHL20(2)                       ---------->DOF2 ------AGL15      --------->AHL20(2)             <---------AHL20(1) ======MADS_MADS----------->GT1                  --------->AHL20(1)    <---------AHL20(2)     ------- -------AGL1  ---------->DOF2     ---------->DOF2--------->ARR11(3)    --------->AHL20(2)     <------   tggaaacaaaaatgcagaaagtaaattattttcccacaaagctactacatatatattgagaaaaataaagaaattaaacttatatttctgacaaaattaa  20239200                                                                                  <-------MYC4                                                                                  <-------MYC2                                                                                  ------->PIF5                                                                                  -------->ABF1                                                                                  <-------MYC3                                                                                  ------->MYC3                                                                                  <-------PIF5                                                                                  ------->MYC2                                                                                  ------->MYC4                                                                                 ====================                                                                                 <---------O2                                                                                 --------->O2                                                        --------->ANAC58         --------->ANAC46                                                        --------->ANAC46         --------->ANAC55(2)                                                        --------->ANAC58         <---------TGA1a                                                       ------>MYB83              --------->TGA1a                                                     <---------MYB111(1)         <---------ANAC55(2)                                           --------->MYB46(3)           <---------AHL20(2)                                          --------->ANAC58        --------->At5g28300------------>CBF      <-----------RAV1(1) <---------YAB1  --------->ANAC58       ----------->GT1 ==================== -->AHL20(2)              <---------AHL20(2)         --------->AtMYB61  --------->AHL20(2)  --------- ---AHL20(2)      --------->MYB46(3)     ------>NtERF2 ------>MYB46(1)  --------->AHL20(1)--------->YAB1   aaatagaaatgttgttgccaacaactatattattccagtctggcacccaattccacctacgcaaaaacagtaaataaaataacacgtggcaataacacta  20239300                                                         --------->ANAC58                                                         --------->ANAC58                <----------DOF2                          --------->ANAC46  <---------At4g35610 <----------DOF2                  --------->ANAC58          --------->YAB1 ==================bZIP_DOF                            <---------ALFIN1        *TSS ==================bZIP_DOF       <<<<<<<<<TBF1        --------->ANAC58   <---------CCA1(2) >ZAT6  ---------->DOF2        <<<<<<<<<TBF1  ------>ZmHOX2a(1)    --------->ZAT14 <---------CCA1(2)-   ttttggctgataaagactctttcactttaattcttcttcttcttgttcctcatacacacacactactactactctcatctctctcatatcaaacagaaga  20239400                                                                 --------->ZAT6                  <---                                                               ----------->RAV1(1)               ----                                                        ------>MYB46(1)--------->YAB1     ---------->DOF2    <---------ANAC58        <---------ICU4              ------>MYB83  <---------YAB1 <---------------AGL15    <---------ANAC58       <---------YAB1      <<<<<<<<<TBF1  --------->ANAC46       --------------->AGL15 --------->DOF2    <----------DOF2        <----------DOF2--------->ARR14(2)          ------>ZmHOX2a(1)   aacaaagcgtgcctcttctctctttcttcatcattctcatcaagctttcttcttcaccaaattcccaacactatcattcccttcttcctctataaagaat  20239500                                                                                ----------->HVH21                                                                               <-----------HVH21                                                                              --------->O2                                                                              --------->TGA1a                                                                           =============MYC_MYB                                                                           ------->GAMYB                                                                           --------->DEAR3(1)                                                                          --------->MYB46(3)                                                                        --------->ARR14(2)                                                                        --------->MYB52(1)                                                                      <-----------HVH21  <---------MYB52(1)                                                                      --------->LBD16  --------->DREB2C(2)                                                                     --------->ANAC46  --------->DEAR3(1)                                                                    <---------LBD16 <---------ALFIN1                                                               --------->DEAR3(1)  --------->MYB46(3)                                                           =============================MYC_MYB                                                           ------>MYB83 <---------ARR14(2)                                       <-----------GT1     -------->P--------->ANAC55(2)<-----------TGA1                               --------->ARR14(2)          ------>MYB46(1)--------->DEAR3(2)                               <---------ARR14(2)         ----------->RAV1(1) <---------O2                        ------>ZmHOX2a(2)                --------->AtMYB61==============MYC_MYB          <<<<<<<<<TBF1<------ZmHOX2a(2)                 --------->MYB46(3)--------->ANAC46       <<<<<<<<<TBF1  <---------ARR14(2)                --------->MYB46(3)<------------AtMYB77 ------ICU4           --------->ARR14(2)      --------->ZAT6<---------ALFIN1  <---------TGA1a  ------ ----->YAB1           ------->TEIL  --------->YAB1    --------->AtMYB61----------->HVH21<-----------HVH21   catcacttcttcttcttctcaatggatccttgggatacttataacataccactagaccaccaacaccgtctccgtaaccgccgtgaccaccgtcatcctt  20239600                                                                                                   ==                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   ==                                                                                                   --                           <---------At5g28300                                                     <-                      ------>MYB83                                                    <---------ARR14(2)                    <---------MYB59                                                   --------->ARR14(2)               --------->HSFB2a(2)                         ------>ZmHOX2a(1)    --------->YAB1     --        --------->ZAT14   <-----------GT1      ------>ZmHOX2a(1)               <---------ATHB12 -----     ------>ZmHOX2a(1)------>MYB46(1)      --------->ARR14(2)                 ------>MYB46(1)   <---- >ZmHOX2a(1)   ------>ZmHOX2a(1)         --------->HSFB2a(1)                  ------>MYB83     <-----   ccttctcctctactctcctcgaccaaatttaccgctccatcgacgattcctctactaactcctcatccatgagaaaaaccaaacatcagaaccgcgagga  20239700                      ------>NtERF2                     ----------->HVH21                    <------NtERF2          --------->At4g35610          <---------At4g35610      --------->ARR14(2)      <---------ARR14(2) <---------ANAC46   ------>NtERF2 <---------ANAC58   --------->LBD16 <---------ANAC58  --------->RAP2.6(2) =======================MYC_MYB ------->O2        --------->DEAR3(1)         --------->TOE1(3) ------->ANAC58 --------->DEAR3(1)            --------->YAB1 --------TGA1a  --------->ANAC46              --------->TOE2(3) ===========================MYC_MYB         --------->GLK1(2)                                 ------- ------->TGA1a  ------->GAMYB              <---------GLK1(2)                                  <------ --------O2    --------->MYB46(3)    --------->CCA1(2)                                        ------>ZmHOX2a(1) ------->ANAC58<---------MYB55(2)    <------ZmHOX2a(2)                                  --------->ANAC58 ---->ARR14(2) <------------AtMYB77 --------->ARR14(2)                                  --------->ANAC58 -----ARR14(2) --------->DEAR3(2)   --------->AGP1          --------->GLK1(2)   ---------->DOF2 ----- -ZmHOX2a(1) --------->MYB52(1)     <---------ARR14(2)--------->TOE2(3)    <---------ATHB12   -------   cacgcgtgtttctgctaaccgccgcgacgatttcaacagatccaagaatcttaaaaccatagaacctgttttcttcaaacattcaagctcaagctcctct  20239800                                                            <------NtERF2                                                           <---------ATERF1(1)                                                           ------>NtERF2                                                           --------->LBD16                                                          --------->DEAR3(1)                                                          <---------ATERF1(2)                                                          --------->ATERF1(2)                                                          <---------DEAR3(1)                  -------                                                         --------->ATERF1(1)             <---------ALFIN1                                                         <---------LBD16                --------->DEAR3(2)                                                        <---------ATERF1(1)             --------->MYB46(3)                                                       --------->ANAC46                 <---------MYB55(2)                                                      ------>ZmHOX2a(1)                ------->TEIL        <---------ARR14(2)                        <---------ARR14(2)                --------->ANAC58        --------->ARR14(2)    <---------ICU4      --------->ARR14(2)                --------->ANAC58        <---------GLK1(2)    <---------YAB1  <------ZmHOX2a(2)                   <---------ARR14(2) -->At4g35610             <---------YAB1     ================HOX2a_HOX2a         --------->ARR14(2) ---At4g35610        --------->LBD16         ====================================HOX2a_HOX2a -------- ------>HVH21       <---------ANAC58        --------->ARR11(3)            ------>ZmHOX2a(1) --------- ---->RAV1(2)       <---------ANAC58        <---------ARR11(3)           --------->TOE2(3)  <--------   gactcaagcggattctcgtcttccgagtctgattatttctacagacgatctaaatcctcgccggcgatttctcatcctaaaccgatacgaaccaccgtgg  20239900  Previous    Next  AGI:  At1g54200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45643.1) Range:  from: 20239379    to: 20240732    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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