Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <<<<<<<<<TBF1         <<<<<<<<<TBF1    <---------ARR14(2)    --------->ARR14(2)    <---------GLK1(2)  ----------->ARR10 -------->At4g35610 ---------At4g35610                                               --------->GLK1(2) -------->LBD16                                                  <---------GLK1(2) -------LBD16                                                 <------ZmHOX2a(2) -----ARR14(2)      <----------DOF2 =================================HOX2a_HOX2a ---->ARR14(2)    --------->At4g35610                        --------->ARR11(3)                 <---- --------AGL1     <---------At4g35610                        <---------ARR11(3)        <---------ARR11(3) -GT1--------->GLK1(2)              ------>ZmHOX2a(1)    ---------->DOF2 <----------DOF2     <-------   tccgcagattcttcttcttcagctttgtatttcttctcctacagagagagacagcgagagaaagatcgattctgtctttatacagacattatctcccact  20231000                                                                                              -------                                                                                              -------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                          -----------                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                      <---------ARR14(2)           <---------ANAC46                                                           --------->ARR14(2)           <---------ANAC58                                                           --------->AGP1       <-----------HVH21                                                              <---------AGP1      <-----------RAV1(1)                          ----------->GT1                    --------->ARR11(3) -----ATHB12                            --------->MYB52(1)                    ------>ZmHOX2a(2) --ALFIN1  <---------ANAC58            ----------->HVH21         <---------AHL20(2)   <---------ARR11(3)   cattctctgtgtcgcttgaagcagcaagagagagagagagactgacagagacagagttaaatgcgaatttatgggtttgatctatacagatctgtgtacc  20231100                                                                                 --------->ARR11(3)                                                                           <---------HSFB2a(2)                         --------->ICU4                                    <---------LBD16                     <-----------HVH21                           <---------ARR14(2)  <---------AHL20(2)------->GAMYB                                --------->ARR14(2) >TEIL             <------------MYB.PH3(1)                       --------->GLK1(2) -->ZAT18        --------->MYB52(1)                            <----------DOF2   <---------ARR11(3) >ZAT14         ----------->HVH21                             <---------ANAC46  <---------At4g35610 -ZAT18       <---------ANAC58                                <---------ANAC58  --------->GLK1(1) >REM1(2)     <---------ANAC46         ------------>CBF       <---------ANAC58  <---------GLK1(1) -ZAT14       <---------ANAC58<-----------GT1                ------>NtERF2------>ZmHOX2a(2)        <- ---->AtSPL8  --------->bZIP60(1)------->GAMYB  <---------At4g35610     --------->ARR11(3)    -------   ctaatttatgtctctggcgtaacggtcatatttaaccccatttcaatttgagctcttcatcgctgcgtttctgtgatctcggagctcttccaagtgtacg  20231200                     <---------ZAT14                     --------->ZAT14                                                      <---------ANAC58                   <---------ZAT14                                                        <---------ANAC58                   --------->ZAT14                                 <---------HSFB2a(2)    <---------AtLEC2               ------->TEIL            <----------DOF2  --------->ARR11(3)                <---------ANAC46               <---------ARR14(2)      <---------YAB1   --------->ARR14(2)     ----------->RAV1(2)               --------->ARR14(2)   <---------YAB1      <---------ARR14(2)   ------>ZmHOX2a(2)    <-----------GT1--------->ZAT18----------->GT1       <---------ARR11(3) <---------ARR11(3) ---------DOF2<---------CCA1(2) <------------CBF    <---------TOE2(3)      --------->ARR11(3)    ---- >TEIL    <----------DOF2     --------->ICU4       ---------->DOF2 --------->HSFB2a(2)  <---------YAB1   tcttttttgcctctttgtatctgcacagtgcaagaattgtgatttttgggtattaaagtatcttcatttctagatttgatcttctgggttttgcttgaaa  20231300                                                                            <---------ANAC58                                                                      --------->REM1(2)                                                                   <---------bZIP60(2)                                                                   --------->O2                                                                   <---------ANAC58                                                                   <---------O2                                                                   <---------ANAC55(1)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------TGA1a                                                                   --------->TGA1a                                                                ----------->TGA1         <---------At4g35610                                                   --------->DAG2<---------TGA2(2)       --------->At4g35610                                            ---------->DOF2     ----------->HVH21 --------->ANAC58  -                                            =================================bZIP_DOF <---------At4g35610                                       ----------->GT1        --------->At4g35610 --------->ANAC46  -         <---------ARR14(2)      <---------HSFB2a(2)         --------->GLK1(2)    --------->ANAC58 --        <---------GLK1(1)        --------->HSFB2a(2)       --------->CCA1(2)<---------ANAC58      --- ------->GT1         ------>ZmHOX2a(2) <---------ZAT6   ----------->ARR10   <---------ANAC46   ------   tgtgatttgggtttctggtttgatctcatagggttcgagtagtgtcaaaagagaaggtgagagatgctgacgtgtatagcttgcacgaagcagcttaaca  20231400                                                                                         <-----------RAV1(2)                                                                                      --------->TGA2(2)                                                                                      ----------->HVH21                                                                                     <-----------HVH21                                                                                     <-----------TGA1                                                                                    <---------TGA1a                                                                                    <---------TGA2(1)                                                                                    --------->TGA2(1)                                                                                    --------->TGA1a           --------->GLK1(1)                                                        <---------bZIP60(1)           <------ZmHOX2a(2)                                                        =================          <---------ARR11(1)                                                        <---------O2          --------->ARR14(2)                                                        =================          --------->ARR11(3)                                                        <---------bZIP60(2)          <---------ARR14(2)                                                        --------->bZIP60(2)          <---------ARR11(3)                                                        --------->bZIP60(1)          <-----------ARR10                                                         --------->O2          <---------AGP1                                                            --------->ANAC46         <---------ARR14(1)                                                         --------->ANAC58         <---------CCA1(2)                                                          --------->ANAC55(2)       <---------ANAC46                                                             --------->ANAC58       <---------ANAC58                                                   <---------AHL20(2)       <---------ANAC58                                             <---------------------WRI1<------      <---------LBD16                                              --------->ANAC58----------->STF1 ----->MYB83------>ZmHOX2a(2)              --------->ATHB12        --------->ANAC58<-----------STF1 ----->MYB46(1)                      --------->ANAC46          --------->ANAC58   <---------TGA2(2) --------->RAV1(1)<---------HSFB2a(2)--------->ANAC58          --------->ANAC58  ----------->HVH21 ------>AtMYB61   --------->HSFB2a(2)--------->ANAC58     <------ZmHOX2a(1)      ----------->TGA1 --->ZAT6<------NtERF2              <---------LBD16    --------->STY1(1) --------->AHL20(2)  <-------   ccaacaatggcggatctactcgagaagaagatgaagaacacggagttattggtacccctaggactaagcaagcgattaaatcactgacgtcacaggtaga  20231500                                                       <---------PCF2                     <---------AtLEC2                  <---------PCF5       <------MYB83        --------->At4g35610                           <------NtERF2         <------MYB46(1)        ----------->RAV1(2)        <-------GAMYB      ----------->HVH21     <---------MYB46(3)        <---------ZAT2             <---------ANAC58  --------->LBD16    <---------MYB46(3) ============================bZIP_DOF               <---------ANAC58  <-------GAMYB <---------MYB52(1) =MYC_MYB         <----------DOF2  <---------ANAC58 <---------ANAC46 <---------ANAC58      <---------At4g35610 -TEIL  <---------At4g35610       <---------MYB46(3)<---------ANAC58 <---------ANAC46      <---------ZAT2 -P     --------->ZAT2           <---------AtMYB61 <---------LBD16   <---------ANAC58      --------->At4g35610   ttaatctttctgctgagtcactttcatggattgttttggttgcaagtgaaaatggcgggaccattctagtttcgttgttggtttctgtttgggagctaag  20231600                                    <---------ANAC46                             <---------ANAC58                                    <------MYB83                                 <---------ANAC58                                    <------MYB46(1)                              <-------GAMYB                                   <---------AtMYB61                            <---------MYB46(3)                                   --------->MYB111(2)                       <---------ANAC58                                   --------->MYB59                           <---------ANAC58                                   --------->MYB111(1)                   <---------------AGL15                                   --------->MYB46(2)                    <----------DOF2      <------               ---------->DOF2     <---------MYB46(3)                 <-----------GT1         <------   aacaaaaaaaaacatgttaaagcatgactcatatggtttggtagagacttgactctgagtcttgaatcaatatttcttttcttggttgagtttgaataat  20231700                                                                                         <---------YAB1                                                                                       --------->ATHB51                                                                                       -------->ATHB1                                                                                       -------->HAHB4                                                                                       <---------AHL20(2)                                                                                       --------->ATHB12                                                                                       <---------ICU4                            <---------MYB52(1)                                        <---------ATHB51                           <-------GAMYB                                     --------->ANAC58                          --------->MYB52(2)                      <----------DOF2     --------->ICU4                       <-----------HVH21                      <---------ANAC58        <---------ATHB12 --ATHB1               ------------>AtMYB77   --------->ICU4  <---------ANAC58        <---------YAB1 ---ICU4       ------>ZmHOX2a(1)  <----------DOF2     ---------->DOF2        --------->ANAC58   tcttcaaacatttattcctatgaattgtcagttactcttttatctgtaatttttgtcaaagcatgcgtcttttgtatgtaagtaactaattattgttcat  20231800                                                                    --------->MYB52(1)                                                                   ------->GAMYB --------->GLK1(2)                                                                  <---------MYB52(2)                                                                  --------->MYB46(3)                                                          <---------HSFB2a(2)   <---------GLK1(2)                   ---------->DOF2                        --------->HSFB2a(2)--------->YAB1     <----     ---------->DOF2         --------->LBD16             <---------LBD16--------->LBD16         ----- <---------At4g35610       <-----------RAV1(2)        <---------ZAT14 <---------LBD16         <------ --------->At4g35610     <-----------HVH21            --------->ZAT14--------->MYB52(1)     <--------   ttcagctaaaagacatggcagtaaaggcttcaggggcatacaaaaactgcaaaccgtgttctgggacaacaaaccggaatcagaatcgaaactatgctga  20231900  Previous    Next  AGI:  At1g54180.1    Description:  ATBRXL3/BRX-LIKE3 (BREVIS RADIX-LIKE 3). similar to ATBRXL2/BRX-LIKE2 [Arabidopsis thaliana] (TAIR:AT3G14000.1); similar to ATBRXL2/BRX-LIKE2 [Arabidopsis thaliana] (TAIR:AT3G14000.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO45645.1); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591) Range:  from: 20231364    to: 20233904    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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