Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------At4g35610                                                          --------->YAB1                                                       <---------ICU4                                                       --------->YAB1    ---------->DOF2                                   <---------YAB1  <---------ANAC55(2)            --------->TOE2(3)    --------->ICU4  --------->ANAC58 <---------ANAC46                 --------->YAB1    <----------ID1      --------->TOE2(3)  --------->ANAC58 <---------ANAC58                <---------ATHB12---------->DOF2     --------->ANAC58  --------->ANAC55(2)--------->ATERF1(1)     <-----------GT1  --------->At4g35610      --------->ANAC58  <---------YAB1   <---------ANAC58     --------->AHL20(2)<-----------GT1     <-----------GT1   tgttacgaaagacacaaacttgcgcaggcttcatacatcaaatcaaataacaaatcataatcacagctctaaagaacaaataacatgacaaaccacaaaa  20229200                 --------->YAB1                <---------YAB1                --------->ICU4              --------->YAB1                                                               --------->ANAC58             --------->AHL20(2)     <-----------GT1                --------->MYB52(1)   --------->ZAT14           ------>MYB83         <----------DOF2          <-----------GT1      <---------ANAC46           ------>MYB46(1)      <---------DAG2      <---------AHL20(2)  --------->ARR14(2) --------->ANAC58         <---------MYB59 --------->ANAC58          <---------AHL20(2)   ------->TEIL  ---------------      <-----------GT1    --------->ANAC58          --------->AHL20(2)   <---------ARR14(2)--------->ZAT18   attcaaatttaccaaataataataaacaagacaactttttgcaatccaaagaataaaattttcaatacaaaacgaatttggcctagacagagtacccaaa  20229300                  ------->GAMYB                ------>MYB83                --------->At4g35610                ------>MYB46(1)               --------->MYB52(1)                               --------->TOE1(3)            <-------              ------->GAMYB                                     --------->TOE2(3)            --------              --------->AtMYB61                              <-----------GT1                 --------             --------->MYB46(3)                           <---------ICU4                     <-------             <---------MYB55(2)                          --------->ICU4                     ---------            --------->ANAC58                           --------->AHL20(2)                   ---------            -------->P                                 --------->YAB1            --------->YAB1<-----            --------->ANAC58                        --------->YAB1             --------->GLK1(2)   --------->TOE1(3)        ------>MYB46(1)        <---------AHL20(2)      --------->YAB1   <--------   --------->TOE2(3)        ------>MYB83           --------->AHL20(2) <---------AHL20(2)   --------->ARR11(3) >AtSPL8   --------->WOX13(1)                     --------->AHL20(2)  --------->AHL20(2)   <---------ARR11(3)   tgaaaccctaaatcaaccaactgaatcaccaacttctcaaaatttgaatcaaattaataatatttacctcaataaaatcagaatcagaagatagatatct  20229400                                                                                                <----        <---------ICU4                                                                          <----       --------->ICU4                                                                   ------>NtERF2   --------->ARR11(3)                                                                   <------NtERF2   <---------ARR11(3)                                                                   --------->At5g28300 ----------->GT1                                                                      <---------ANAC46 --ARR14(2)                                                                           <---------DEAR3(1) ->ARR14(2)                                                                           <------NtERF2 ->ARR11(3)            --------->ZAT2                        --------->ARR14(2)      <---------LBD16 --ARR11(3)            <---------ZAT2                        <---------ARR14(2)   <-----------HVH21 >RVE1(1)           ---------->DOF2                         <------ZmHOX2a(1)    --------->ANAC46 >GLK1(1)     --------->TOE2(3)                         <---------TOE1(1)        <---------ANAC58 ----LBD16    --------->TOE1(3)                         <---------TOE2(1)        <---------ANAC58 -GLK1(1)  <-----------GT1            <----------DOF2--------->TOE1(2)  ----------->GT1--------->LBD16   gggaagataatatttacctcaacaaagctggaatcaacagctttaaaaatccaatgctacgaggaaacgagtattggtaatttccgtcgcggcgaattag  20229500                                                          <---------WRKY12                                                         --------->WRKY18(1)                                                  <---------WRKY38(1)                  --------->ATHB12                                                  <---------WRKY12                    <---------YAB1     ----------->RAV1(1)            <------ZmHOX2a(1)   <-----------HVH21          --------->GLK1(2)    ----------->HVH21    --------->LBD16  --------->GLK1(2)                       --------->ARR11(3)    --------->ANAC46    --------->ATERF1(2)     --------->At5g28300               <---------ARR11(3)    <---------ETT(1)    <---------ATERF1(2)  <---------LBD16  --------->YAB1    <---------TOE2(3) -----TOE1(3)          <---------LBD16   <---------GLK1(2)<---------WRKY38(1)   ----------->ARR10 -----TOE2(3)      <----------DOF2<---------TOE2(3)--------->MYB52(1)      <---------ZAT6       <----   ggttttccgacagagttaggggtttaccggcgaattgaggagagaatcgcggtaaacgggtcaacaataaatctctagagttgagattttgatttgattt  20229600                                                      <-----------RAV1(1)                                                   <---------MYB52(1)                                                  <-------GAMYB                                   <--                                                 ------>ZmHOX2a(2)                                ---                                                <------ZmHOX2a(2)                                <---                                               --------->ARR14(2)                              <-----                                               <---------ARR14(2)                              <-----                                               <---------ARR11(3)                            <-------                                               --------->ARR11(3)<-----------GT1    ------>MYB83<----      <---------MYB46(3)                  ==============HOX2a_HOX2a                 ------>MYB46(1)    <-------GAMYB         <------------CBF=============HOX2a_HOX2a                  <---------LBD16 <-----------GT1       <---------ATHB12   <------ZmHOX2a(1)<---------ANAC46        --------->MYB52(1) -----AHL20(2) *TSS------------>CBF     <---------TOE2(3)<---------ANAC46--------->ALFIN1    <-------   ttttttcgttgttgcaaacttttcaatgaattgagggaatttaaggacagatcgttgtgttgtgtatttacgagggtgtgatcacctacggatgagcgta  20229700   <---------TOE2(3) ------HAHB4                                                                  <---------ICU4 ------>YAB1                                                                 <---------ATHB12 ------YAB1                                                      <---------AHL20(2) ----CCA1(2)                                                    <---------ARR11(3) ----ARR14(1)              ------>ZmHOX2a(2)                    <---------AHL20(1) --ANAC58      <----------DOF2                                  --------->ARR11(3) -----ARR11(1)<---------DAG2                                    --------->AHL20(1) --ANAC58     <----------DOF2     <-----------GT1      <----------DOF2  --------->TOE2(3)          --   tcattaagtttttgggccttttgttttgatccgttttaacttgtttgggcttaacacctttgttgatatatttatctcaataactacttcttcacaagag  20229800                 <---------ARR11(3)                <---------CCA1(2)     <---------CCA1(2)           <-------MYC3     <---------ICU4           ------->MYC3     --------->ATHB12         <---------TOE1(2) --------->ICU4        <---------ALFIN1   <---------YAB1     ----------->HVH21    --------->TOE2(3)                      <---------AHL20(2)  --------->ARR11(3)     <---------ICU4                       ----------->GT1  <---------ARR11(3)     --------->YAB1              --------->ICU4                     <---------ICU4 <---------CCA1(2)      <---------ATHB12           ----------->GT1                     <---------ATHB12 ------->AHL20(2)--------->ARR11(3) --------->AHL20(2)      ---------->DOF2       --------->TOE2(3)   attatatctcacacgtttatatctcaaacattattagattatatctgaagaagtagttattcaaaagttaattagctatatttatctcaataactacttc  20229900                                        --------->YAB1                                       <---------YAB1                                     --------->ATHB12                                     <---------ICU4                    <---------ARR11(3)                                    <---------YAB1                     --------->ARR11(3)                                    --------->ICU4                   <---------TOE2(3)                                   --------->TOE2(3)    <---------AHL20(2)               ---------->DOF2    <---------ICU4        --------->AHL20(2)          --------->GLK1(1)       --------->YAB1        --------->ATHB51                  <---------ARR11(3)          <---------CCA1(2)      <---------ATHB12       --------->ATHB12--------->CCA1(2) --------->ARR11(3)      ----------->GT1     --------->ARR11(3)           <---------AHL20(2)                <---------CCA1(2)   --------->CCA1(2)      <---------ARR11(3)           --------->AHL20(2)              --------->AHL20(2)  --------->ARR11(3)     <---------CCA1(2)             <---------AHL20(1)      ---------->DOF2  <---------ARR14(2)   --------->AHL20(2)        --------->TOE2(3)  <---------------------WRI1   ttcagatatagtatatccaaagagattatatctcaaacattattagaattatctcaaattatttgtcaattgagatatatccaaagagattatatctcaa  20230000                                                               --------->ANAC55(2)                                                               <---------ANAC55(2)                         <-----------GT1                      <-----------------------TaNAC69(2)                    --------->ICU4                            --------->MYB59              <---------AHL20(2)                        ---------->DOF2     --------->YAB1             --------->AHL20(2)            --------->YAB1     <---------------AtSPL8   acattgtcaattgaattttatagttattaacttcttacaagtctataatacaagtagagaaagttaagtactaagttttcatattaaacaaaaaaaaaac  20230100  Previous    Next  AGI:  At1g54170.1    Description:  CID3 (CTC-Interacting Domain 3). similar to CID4 (CTC-Interacting Domain 4), protein binding [Arabidopsis thaliana] (TAIR:AT3G14010.1); similar to CID4 (CTC-Interacting Domain 4) [Arabidopsis thaliana] (TAIR:AT3G14010.2); similar to CID4 (CTC-Interacting Domain 4) [Arabidopsis thaliana] (TAIR:AT3G14010.3); similar to ataxin-2 related protein [Ipomoea nil] (GB:BAF46306.1); contains InterPro domain Ataxin-2, N-terminal (InterPro:IPR009604) Range:  from: 20224727    to: 20229615    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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