Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ANAC58        --------->ANAC58                                                                        -----        --------->AtLEC2                                                                        -----   --------->ANAC46                 --------->AHL20(2)                                          ----- --------->ANAC46                   <---------AHL20(2)                      <---------YAB1   ------>ZmHOX2a(2) ----ARR11(3)                      --------->AHL20(2) ----------->GT1   <---------CCA1(2) -------->HAHB4   cttacacaacatgcaaacaaaaactaaaatcgacagattaaatttctgagtttgaacagataaaaaaactcatcaaatctcattgaacttaatgatccaa  20222700                      <---------RVE1(1)                 --------->AHL20(2)                      <---------CCA1(1)                 <---------AHL20(2)                     <---------ARR11(3)            <---------AHL20(1)                     --------->ARR11(3)            <---------AHL20(2)                     <---------GLK1(2)           <---------YAB1                               <------                 ---------->DOF2               --------->YAB1                                 -------               --------->AtMYB61               <---------ICU4                                <-------               ------->GAMYB                  <---------AHL20(2)                           ------>MYB46(1)              --------->MYB46(3)              --------->AHL20(2)                           ------>MYB83           --------->AtMYB61                  --------->AHL20(1)    --------->YAB1       ------->GAMYB          <---------MYB52(2)                  <---------YAB1--------->YAB1               --------->AtMYB61          --------->MYB46(3)                  --------->ICU4<---------AHL20(2)          --------->MYB46(3) ---->ANAC58 ------>MYB46(1)                --------->YAB1  --------->AHL20(2)         --------->ANAC58 ---->ANAC46 ------>MYB83          <---------CCA1(2)<---------YAB1 <---------YAB1      -------->P ---->ANAC58 -------->P          --------->YAB1-------->ATHB1    --------->YAB1        --------->ANAC58   gaaaacagagaaaccaaccaaaagatttttttctctcataactcaaaaattattatttttaattatatcatcataagtagaaactgagcaaccaaatcat  20222800                 ---------->DOF2                                      <------MYB83             <---------AHL20(1)                                   --------->ARR14(2)             --------->AHL20(2)                                   <---------ARR14(2)             --------->AHL20(1)                              <----------DOF2             <---------AHL20(2)                          ---------->ID1            --------->AHL20(2)                          <---------ANAC58            <---------AHL20(2)                          <---------ANAC58          ------>MYB83--------->ZAT18                  <---------AtMYB61       ----------------->AGL3                          <-----------RAV1(1)      --------->CCA1(2) ---ICU4--------------->AGL15                        <----------DOF2  ----------->GT1 -->YAB1<---------MYB59                           --------->ARR11(3)  <------MYB46(1)               - --ATHB12 ------>MYB46(1)                         <---------ARR11(3) --------->MYB59       ----------   aacatcactaccaaataaattaagcgaacaagaagagagagagagagagagagacctttggtgctttggatttggtaagaagagatggagagaaaaagaa  20222900                                 --------->YAB1                                --------->ICU4                              --------->YAB1                             <---------YAB1                             --------->ICU4                           --------->YAB1                          --------->ICU4        <---------YAB1                          <---------YAB1        --------->ICU4                        <XXXXXXXXXXXXXXXXXXXXMIR414     <---------AtLEC2                        --------->YAB1       --------->ICU4                       <---------YAB1        <---------YAB1                       --------->ICU4      --------->YAB1------->TEIL <---------ANAC55(2) --------->YAB1       --------->ICU4<---------ANAC58         <---------MYB46(3) ----------->GT1    --------->ICU4    <---------YAB1    <---------ANAC58        <--------P         <- --------->ANAC55(2)<---------YAB1 <---------YAB1  <---------YAB1    ------>ZmHOX2a(1)        ------- -------->MYB59  --------->ICU4 <---------YAB1--------->YAB1        --------->TOE2(3)         <------ >DOF2           --------->GLK1(2) --------->ICU4--------->YAB1  ------>ZmHOX2a(1)     <----------DOF2   gttaagtaataagcttgagattatgatgatgatgatgatgatgaatgatgatgatgatgcatgtctccttcctcagaacatggttgtttctttctcttca  20223000                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                             <-------                                               <---------ANAC58                              --------                                               <---------ANAC58                              --------  <----------DOF2                <---------ANAC58            <---------ICU4                 --------- --------ARR11(3)                <---------ANAC46            --------->YAB1              <---------AHL20(2) -->ZAT14                       --------->MYB59<---------ANAC46              <----------DOF2<-------- ---ZAT14       ------>ZmHOX2a(1)<---------ANAC58  ---------->DOF2    <----------DOF2    --------->AHL20(2)   ctatctttctctctcttcctctgtctctgcaaattgggtattggctatggcttaaaagactaatcttgactccttttctctttttttttttttaattatg  20223100                                                       <---------AHL20(1)                                                       --------->AHL20(1)                                               <---------AHL20(1)                                               --------->AHL20(1)                                               --------->AHL20(2)                                              <---------AHL20(2)                                           <---------AHL20(2)                                          <---------AHL20(2)                                      <---------AHL20(1) ----TOE2(3)                          --------->AHL20(1)           <-----------GT1 ----TOE1(3)                          --------->AHL20(2)  <---------YAB1 ----YAB1                             <---------AHL20(2)  <---------AHL20(2)      --------->AHL20(2) --ICU4                          ------------>CBF      <---------AHL20(2)         <---------AHL20(2) ->YAB1                         --------->ANAC58       --------->AHL20(2)        --------->AHL20(1) >HAHB4            *TSS <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)   <---------AHL20(2) >ICU4           <-------TEIL   --------->ANAC58    --------->AHL20(2)           <---------AHL20(1) -ATHB51    --------->MYB46(3)  --------->ANAC46  <---------AHL20(2)             --------->AHL20(2)   gttttcttctctcaacaaatgcatatttattcacacacaatttattaaatattttaaaatattattttgtttccatttctgaatttatttgcagagtttg  20223200                                                                                          <----------DOF2                                                                                  --------->O2                                                                                  --------->ANAC58                                                                                  <---------ANAC55(2)                       <---------CCA1(2)                                          <---------O2                   <-----------GT1                                                --------->ANAC58                 <---------AHL20(2)                                               <---------ANAC46          ---------->ID1                                                          --------->ANAC55(2)    --------------->AGL15                                                      ----------->HVH21    <---------------AGL15                                 <---------ANAC55(2) <-----------HVH21<-----   <-----------------AGL2  <----------DOF2              --------->AHL20(2) <---------ANAC58    <-----   <-----------------AGL3<---------YAB1     <---------YAB1<---------TOE2(3)<---------ANAC58  --------   acatttctatttgtggtattttttcttatctttgtttatattgtttatgtttcaaaaattaagtatatcgaatcaaatcgtgtcacgtagtgcttttata  20223300                                                           --------->YAB1                                                          <---------AHL20(2)                        <                                                       --------->AHL20(2)           <---------ARR11(3)                                                      --------->AHL20(2)    ---------->DOF2        --                                                 ----------->RAV1(1)        =========================                                   ----------->GT1  --------->YAB1      ----------->GT1  <---------AHL20(2) ----YAB1             <-----------GT1         --------->ANAC58      --------->GLK1(2)--------->CCA1(2) ----AHL20(2)     --------->AHL20(2)          --------->ANAC46      <---------ARR11(3) --------->AHL20(2) ->YAB1           <---------AHL20(2)          --------->ANAC58      --------->ARR11(3) <---------AHL20(2)   attttcaaatcaggtttagttttattacaaaacaaaatagaaatatgtaggcaacaataaataatagaaaaatctagtaaaagatagatataaatttaga  20223400         --------->REM1(2)      <---------ANAC58      <---------ANAC46                         --------->AHL20(2)      <---------ANAC58                         <---------AHL20(2)    <---------ANAC58                        --------->AHL20(1)    <---------TGA1a                         <---------AHL20(1)    <---------O2                           --------->AHL20(2)    <---------ANAC58                   --------------->AGL15    <---------bZIP60(2)               >>>>>>>>>RAP2.2    <---------ANAC46                <---------ARR11(3)                                              - ----------->TGA1                  <---------CCA1(2)                      ----------->GT1----------->GT1 ----------->HVH21                --------->ARR11(3)         --------->AHL20(2)          --------->ANAC58 -----------HVH21                 <---------AHL20(1)         <---------AHL20(2) --------------------- ------->ALFIN1                   <---------ARR11(3)     <---------ZAT6<------ZmHOX2a(1) --------->ANAC58 =============bZIP_DOF            --------->AHL20(1)--------->YAB1   --------->MYB59<----------ID1---   agtgtgacgcgtgtataatctagacaaggctagaaatatatctaaatatataaatgatagtattaaaatgttaggaaggaaaatagaagacaagaaaaac  20223500                        <-----------GT1                     <---------ICU4                     <---------AHL20(2)                    --------->ICU4             <-----------GT1                --------->At5g28300      <---------ARR11(3)              <---------TOE1(3)          --------->ARR11(3)       <-------TEIL ---------->GT1----------->GT1 <---------AHL20(2)          <---------AHL20(2)              --------->AHL20(2) --->ANAC81   <---------YAB1  --------->AHL20(2)         <---------YAB1                    <---------AHL20(2) ------->DOF2 <---------TOE2(3)--------->AHL20(2)    <----------DOF2                <-----------GT1 -   caaagtaaaaatgtttatggtaaatatttccatttatttcaaagatgtttaacacctttatttttatgttcatatcagtgatgttttatcaatttatatg  20223600  Previous    Next  AGI:  At1g54160.1    Description:  CCAAT-binding transcription factor (CBF-B/NF-YA) family protein. Identical to Nuclear transcription factor Y subunit A-5 (NFYA5) [Arabidopsis Thaliana] (GB:Q9SYH4); similar to CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis thaliana] (TAIR:AT3G14020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62549.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) Range:  from: 20221003    to: 20223119    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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