Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->LBD16                      <---------HSFB2a(2)                      --------->HSFB2a(2)                                  <---------At4g35610              --------->YAB1             --------->ANAC46      --------->MYB46(3)              --------->TOE2(3)          <---------O2          <---------MYB55(2)          <---------MYB52(1)             --------->O2         --------->ANAC58             --------->TOE2(3)        --------------->AtSPL8           --------->TGA1a      --------->ANAC46             --------->YAB1 >ZAT6--------->MYB52(1) <---------GLK1(2)                    --------->ANAC58            <<<<<<<<<ARR1 -ALFIN1--------------->AtSPL3           <---------TGA1a    <---------ALFIN1              <<<<<<<<<ARR2 ------>WRI1--------->SPL7         ------->TEIL<-------TEIL --------->REM1(1)        <-----------GT1   cgaccacataccggtaccataactccagaaactgatgtatcacacgaggctcgtagtcttctacacccatcgacttaagcagagatttcacaatcttagc  20218500                 <-----------GT1         --------->ARR11(3)     --------->ICU4         <---------ARR11(3)------>ZmHOX2a(1)        --------->REM1(1)<---------At4g35610                  ---------->DOF2         <---------HSFB2a(1)       <-------TEIL <---------DAG2                        --------->DAG2              --------->HSFB2a(1)   --------------->AtSPL8----------->RAV1(2)             ---------->DOF2             ------->TEIL----   atctctaggtacatcttcttcaccttctcctgccatgtttatccctaaacaactaaaaaaaaagtaaagctacagagtcaaattaagaacctttcttata  20218600                                         --------->ANAC58               ----------->RAV1(1)       --------->ANAC46      <---------ALFIN1              --------->MYB46(3)         --------->ANAC58 ------->GAMYB  ---------->DOF2      <-----------RAV1(1)        ------->TEIL  --------->YAB1----------->RAV1(1)      --------->YAB1      <---------REM1(1)         <---------GLK1(2)         --------->ANAC46       --------->AHL20(2)     <---------TOE2(3)          <---------ARR14(1)    ----------->HVH21--------->TOE2(3) ----->ANAC46 --------->REM1(1) <---------CCA1(2) <---------ANAC46    <---------ANAC55(2)   cagaattgatgttgcaacaacacaagtttcaatcgaatctcacaagcaaacatcgtgtaacagcaacacattacataaatcgaataaataagaattagag  20218700             --------->CCA1(2)                                                                      -     --------->GLK1(2)         <-----------ARR10                                                    -     <---------ARR14(2)        --------->GLK1(2)                                                    -     ------->TEIL---------->DOF2            <-------TEIL                   --------->ANAC46       <--     --------->ARR14(2)       <---------GLK1(2)                        --------->AHL20(2)        <---  --------->ANAC58          ----------->ARR10--------->REM1(1)       <---------ARR11(3)  ----------->GT1  --------->ANAC58     ---------->DOF2  ------>MYB46(1)   <---------HSFB2a(2)           ----------->GT1  --------->ANAC46 <----------ID1       ------>MYB83      --------->HSFB2a(2)    ---------->DOF2 ----   cttcacgaatcggagataagaaagacaaaggagattctaacctagcttcatcaataagttccaaaacacaagattatatgccataaagaggcgataaata  20218800                                                                            <---------LBD16                                                                          --------->GLK1(2)                                                                         --------->ARR14(2)                                                                    --------->DEAR3(1)                                                                    <---------ANAC46                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                   <-----------------------TaNAC69(2)                                                                  <---------ERF1                                                                  <---------ATERF1(1)                                                                  <---------RAP2.3(1)                                                                  <---------DEAR4(2)                                                                  ------>NtERF2                                                                 <---------DEAR3(1)                   <------MYB83                                  --------->DEAR3(1)                   <---------ANAC46                              <---------RAP2.3(2)                   <------MYB46(1)                               <---------RAP2.3(3)                  --------->MYB111(2)                            <---------ANAC46 ----->MYB83---------->DOF2     <---------ZAT6        <---------WOX13(1)<------ZmHOX2a(1) ----->MYB46(1)   <---------MYB46(3)        --------->MYB52(1)   <---------RRTF1(3) --------->DOF2   <---------AtMYB61        ----------->HVH21    <---------ABI4(1) -------MYB59     --------->MYB46(2)       --------->ANAC46   <---------DEAR3(1)          *TSS ------ANAC55(2)  --------->MYB55(2)  --------->ARR14(2)     ------->TEIL<---------ARR14(2)     <---- ----->ANAC55(2)  --------->MYB111(1) <---------ARR14(2)    --------->MYB52(1)--------->LBD16 ------>NtERF2   cctaatgcgagagagaaagtttggtggagagctagtggcagaaacacgacggagagattgatgaacggcggcgaggaatcgggaaatactaatctctgcc  20218900                <---------TOE1(3)                <---------TOE2(3)      ------>ZmHOX2a(2)     --------->CCA1(2)     <------ZmHOX2a(2)                <----------DOF2                            <---------AHL20(2)    <---------ARR11(3)              --------->At4g35610                         --------->AHL20(2)    --------->ARR14(2)              <---------At4g35610                   --------->ANAC46    <---------AGP1              <---------ARR14(2)                        --------->ANAC58    --------->AGP1              --------->ARR14(2)                        --------->ANAC58    <---------ARR14(2)   <---------ANAC46       <---------ANAC46  <-----------GT1<---------ICU4    --------->ARR11(3)<---------AtMYB61 ----------->HVH21        --------->AHL20(2) <-----------GT1 -----ALFIN1<-----------TBP----------->GT1 <---------ANAC46     <---------AHL20(2) <---------YAB1   actctagatctgatatttatggttttggtttgtaaatctgctgtaacgttgagggtgtaaatgtaatttaactaaaacgctatttattactagtattttg  20219000                                                                                                <----                                                                                                <----                                                                   ----------->GT1          <--------                                                                 --------->MYB52(1)         ---------                                                             <---------AHL20(2)           <---------ANAC58                           ----------------->AGL2           --------->AHL20(2)            <---------ANAC46                      ---------->DOF2                   <---------AHL20(2)       <---------CCA1(2) *TSS                     --------->AHL20(2)                --------->YAB1  --------->YAB1     <---------ANAC58   tatttcactcgtgcataggcccattaaagacccaaattagaacgacggtcgaatgtataatattaaataccgataatagcctcatttctcttccgtttac  20219100                                                             <---------ZAT18                                                             --------->ZAT18                                                           <---------ZAT18                                                           --------->ZAT18        <---------At5g28300                               <---------ANAC58      ----------->HVH21                                   <---------ANAC58  <---------ANAC46                                     <------NtERF2  <---------ANAC58                                    --------->LBD16  <---------ANAC58                                   --------->DEAR3(1) -----ANAC58                                      --------->ANAC46 -----ANAC58                                     ------>ZmHOX2a(1) -MYB52(1)        --------->ANAC46     --------->TOE2(3)  <---------ANAC46                         -- >DOF5.7(2)  --------->REM1(2)      <-----------GT1 <---------LBD16    ------->TEIL              ----   ttgtccgtgtgaccgtgtctacgacgttgaaatcgaaattaccacaatgtcctcgccggagcgtgctctcttgaatctattgacggacatcgctctctcc  20219200                                            <---------ARR14(2)                                            --------->ARR14(2)                                          <---------DEAR3(2)                                          <---------MYB46(3)                                         <---------DEAR3(1)                                        <---------MYB52(1)              --------->TOE1(1)         <------NtERF2             ------>ZmHOX2a(1)         ------>NtERF2             <---------LBD16           <-----------HVH21            --------->TOE1(2)         <---------ANAC46       <------NtERF2                  <---------O2      <---------ZAT18                 --------->RAP2.3(2)      ------>NtERF2                   --------->RAP2.3(3)    --------->RAP2.3(1)               --------->DEAR3(1)    <------NtERF2                     <---------DEAR3(1)   <---------RAP2.3(1)               <------NtERF2   <---------ORA47(2)                --------->RAP2.3(1)   <---------RRTF1(1)                --------->ERF1                         <---------ANAC46   <---------ERF1                    --------->ORA47(2)                    <------NtERF2   <---------DEAR4(2)                --------->DEAR4(2)                    --------->LBD16   ------>NtERF2                     --------->RRTF1(1)                    ------>NtERF2   <---------ATERF1(1)               --------->ATERF1(1)                ------->GAMYB  <---------DEAR3(1)                <---------RAP2.3(1)                --------->ANAC46  <---------RAP2.3(2)               <---------ZAT18                    --------->DEAR3(1)         ---  <---------RAP2.3(3)         <-----------HVH21                       ------>MYB83        ---------->DOF2  --------->ANAC46           <---------MYB46(3) --------->At4g35610   ------>MYB46(1)   <------ZmHOX2a(2)  <---------RRTF1(3)       <---------At4g35610  <---------At4g35610 --------->AtMYB61  --------->ARR11(3) --------->HVH21       <----------DOF2--------->O2                 --------->MYB46(3)  <---------ARR11(3) -->ZmHOX2a(1)--------->TOE2(1)<---------MYB52(1)          <---------YAB1 --------->DEAR3(1)    <----   ttcgacggcgcaatcctcggactgactttagctgttagcgccgtcggttctgctctcaagtatgcttctaccaacgccgcgttgaagaagatcaaagatg  20219300                                         --------->At4g35610             <------ZmHOX2a(1)                          <------ZmHOX2a(2)                      --------->TOE2(3)          ---------                <---------ETT(1)         <---------At4g35610     --------->YAB1             ---------  --------->LBD16        <-----------HVH21                       --------->TOE1(3)          <-------- --------->ANAC46   --------->AtMYB61------>NtERF2             <---------TOE2(3)   --------->YAB1 ---->TEIL   <---------ARR14(2)      --------->LBD16          --------->MYB52(1)  <---------ATHB12  < ---TEIL     --------->ARR14(2)    <---------LBD16          <---------MYB52(2)    --------->ICU4   <-   cacccgaagtctccatttccgacctccgatcactgcttccggcttctgaagacaaatcagagactaacgataacaggaagagcaatgatcagcgaatcgt  20219400  Previous    Next  AGI:  At1g54140.1    Description:  TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT); transcription initiation factor. similar to unknown [Populus trichocarpa] (GB:ABK94051.1); contains InterPro domain Transcription factor TAFII-31; (InterPro:IPR003162); contains InterPro domain Histone-fold; (InterPro:IPR009072) Range:  from: 20217634    to: 20218890    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g54150.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to ZCF61, protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G59560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45619.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 20219099    to: 20221156    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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