Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->MYB52(1)                 <---------SPL7                --------->ANAC58                --------->ANAC58               ------->TEIL                                                                  --------             ------->GAMYB                  <---------AHL20(2)                              ---------            <---------MYB52(2)     --------------->AtSPL8                                   ---------            --------->MYB46(3)     <---------------AtSPL8                                   ---------           --------->At4g35610  --------->ARR14(2)              ----------->GT1        ------>ZmHOX2a(1)          --------->MYB52(1)    <---------ARR14(2)             <------ZmHOX2a(1)  --------->GLK1(1)         <---------WRKY12       --------->ARR11(3)            ----------->GT1     <---------GLK1(1) --GAMYB <---------WRKY38(1) <---------ANAC46      --------->TOE2(3)     ---------->DOF2   <---------LBD16   tacacaattgatcaacggacgtaagggtttggagtatattgtacatttttttttcttaaacgagaggagaaaaaaaaaagaagggattcctcatccgcaa  20214100                                                            ------>ZmHOX2a(2)                                                           --------->PCF2                                                           <------ZmHOX2a(2)                                                          <---------PCF2                       <-----                                                          --------->ARR14(2)             --------->LBD16    --------->ATHB12                                    <---------MYB46(3)              ----------->GT1   <-------TEIL                                        --------->ALFIN1                 <---------ANAC46 ->LBD16                  ------>MYB83               <---------ANAC46                   --------->ANAC55(2) >ANAC46                  -------->P              --------->AtLEC2  <---------ETT(1)    <---------ANAC55(2) >ANAC58         --------->AHL20(2)     --------->TOE2(3) <---------ARR14(2)           <---------LBD16 >ANAC58    --------->YAB1------>MYB46(1)       --------->YAB1<---------ALFIN1       <-----------GT1   atagattcattgaatcaaaaaaaatcccaaccagacaaaaaacattagaatcatgcagtggatcccacttccgaccatttgctgatttttccgtaaatac  20214200               ---------->DOF2                                            --------->LBD16         <---------AHL20(2)           <---------AHL20(2)                 --------->ANAC58     <---------CCA1(1)               --------->AHL20(2)        <-----------------------TaNAC69(2)     <---------RVE1(1)           --------->ARR11(3)       --------->HSFB2a(2)    --------->ARR11(3)           <---------ARR11(3)       <---------HSFB2a(2)    <---------ARR11(3) --------->ANAC58             <---------AHL20(2)   --------->ANAC46 --------->HSFB2a(2)   --------->ANAC58        <---------ARR11(3)        --------->ANAC58      ------ <---------HSFB2a(2)   --------->ANAC46        <---------GLK1(2)----------->GT1          ---------->DOF2 --TEIL  --------->AHL20(2)    <---------TOE2(3)   --------->AHL20(2)   <---------LBD16 --------->YAB1   attctagatatttttttaaaagaaaacgcaatttagattttaaattctagattttaaattctagagaagtaattcgcgcaaaaactgtaatcaaagttta  20214300                                --------->MYB46(3)                       <---------ICU4                        --------->WRKY38(1)              <---------MYB52(1)                        <-                     <---------ANAC46               ------------>MYB.PH3(1) --------->YAB1      -----           --------->ATHB12 ------>ZmHOX2a(2)     ---------->DOF2        --------->YAB1       -------          <---------YAB1--------->WRKY12 --------------->AtSPL8      <-------TEIL      <---------DOF5.7(2) --->AHL20(2)       <---------TOE2(3)   ---------->DOF2----------->GT1--------->YAB1   --------->MYB52(1)   aattcgaaaattttgattagtttacgttgatcgaacaaactacaaagtaccaaaaaacagttatttatagtttcataatcacaaatggataacgacatta  20214400                                                                     <---------AHL20(2)                                                                   ----------->GT1                                                                   --------->ANAC55(2)                                                           ----------->GT1                                                          ----------->GT1                                                        --------->DAG2                                                       ---------->DOF2       <------------CBF      <-     --------->TOE2(3)                       ----------->GT1       <---------ANAC55(2)             <- ----------GT1    <---------YAB1            <---------TOE1(3)    --------->AHL20(2)    <---------ZAT18 ---->YAB1 <-----------GT1                  <---------TOE2(3)    <---------AHL20(2)   <---------MYB52(1) -->ICU4--------->YAB1             --------->YAB1   <---------------AGL15   <---------AtLEC2   <-----   gtaacaacattaataacatcatcttagtttaagtcagtagtaatctatggttaaacaaaaagggtaattaagtaatttgcattgctcagttcgcttccat  20214500                                         ----------->GT1              --------->DAG2                                         <------MYB46(1)             ---------->DOF2                                         *TSS                    ------>ZmHOX2a(2)          ------->GAMYB                  <------MYB83           <------ZmHOX2a(2)       --------->MYB52(1)              <---------WOX13(1)      <---------ARR14(2)       <-----------GT1                <------------CBF         --------->ARR14(2)     ----------->GT1 --------ANAC58                <---------TOE2(3)               <---------AGP1        >>>>>>>>>TBF1 --------ANAC58           --------->AtMYB61                   <---------CCA1(2)   >>>>>>>>>TBF1 -------CBF       --------->YAB1     --------->ATHB12      <---------LBD16     >>>>>>>>>TBF1<--------   tgctggatttaacgggcgaataagaacaccaccaaggatagattggtttatttctagtttcttcggatctataaagtagaagaagaagaagaaaaattct  20214600                                              <-----------GT1                                             <-----------GT1                                          --------->ARR11(3)                                      <--                                          <---------ARR11(3)                                     <---                                          <---------GLK1(2)                                   <------MYB46(1)                                        <---------TOE2(3)                                     <------MYB83                                  --------->AHL20(2)                                          <------ -GLK1(2)                         <---------AHL20(2)                    ----------->GT1   --------->ATHB12   caatttctctctcacaatctcttcgttttctgtgattttatttagattttcccatttcaatctcttgttagaaattgtatatatacctagatcgattggt  20214700        <---------MYB52(1)     ------>ZmHOX2a(2)    <------ZmHOX2a(2)                    --------->LBD16   <---------ARR11(3)                   --------->HSFB2a(2)   --------->ARR11(3)                   <---------HSFB2a(2)   <---------ARR14(2)         <----------DOF2   <---------AGP1          <---------ARR11(3)   --------->AGP1          --------->ARR11(3)   --------->ARR14(2)    <---------HSFB2a(1)  <---------CCA1(2)      --------->HSFB2a(1)                                           --------->MYB52(1) ----------->ARR10       <---------HSFC1(2)               <----------DOF2<---------HSFB2a(2) -------ANAC46           --------->HSFC1(2)             --------->HSFC1(2)     --------->AHL20(2) ----TEIL              ---------->DOF2 <---------LBD16  <---------HSFC1(2)--------->LBD16 ----------- ---MYB46(3)       <---------LBD16<---------GLK1(2)    ------->TEIL      --------->HSFB2a(2)    -----   tcgtagatctgtttgtttttctagggaaagttctttgattctccagaaaattggacgaagctttggattcaaattccagaattaaaaaaaaacagaaaaa  20214800                                                                      --------->ANAC46                                                          --------->AtMYB61                                                       ------->GAMYB  --------->ANAC55(2)                                                      --------->DEAR3(1)                   ------->TEIL                                                      --------->MYB46(3)            --------->ZAT18   <----------DOF2                                    <---------MYB52(2)     <---------ZAT14     <--- >GT1 <---------TOE2(3)                       <---------MYB46(3)  <----------DOF2   --------->ZAT14 ---->AHL20(2)             -------->P        <---------AtMYB61    <---------DAG2    <---------ZAT14--   aaattctttaggttttcattttgaattcttaccagagagtttcaatggtggtagcaacgaccatagcgctttacgcgagtccagcgagcactgtatgttc  20214900                                                     ------>ZmHOX2a(2)                                                   --------->ARR14(2)                                                   --------->ARR11(3)                                      --------->ARR14(2)        <------NtERF2                                      <---------AGP1<------ZmHOX2a(2)           <---------ATHB12 <---------O2           <---------ARR14(3)          <-----------ARR10 --------->TGA1a        --------->ARR14(3)         ------>MYB46(1)    <---------TGA1a        <---------ARR11(3)         ------>MYB83       --------->O2           <---------AGP1 <---------ZAT2             --------->ANAC55(2)    --------->AGP1                            <------- --------->ZAT2       --------->ARR11(3)           <---------ARR14(2)                   --------->MYB52(1) <---------At4g35610  <---------ARR11(3)------>ZmHOX2a(2)      ------>NtERF2        ------>NtERF2 --------->At4g35610 <---------CCA1(2)<---------ARR14(2)  <---------At4g35610      --------->DEAR3(1) ------ALFIN1   ======================MYC_MYB--------->ZAT6<---------DEAR3(1)     --------->ORA47(2) ------->ANAC46 ------->GAMYB ----------->HVH21   <---------CCA1(2)            --------->ZAT18   cacagctcaccaaatcaacgctcatatctcatgtgacctcgatctgaactctagatcttcatcggcgtcttcttccacgagttcgccgactatcggaggt  20215000  Previous    Next  AGI:  At1g54130.1    Description:  RSH3 (RELA/SPOT HOMOLOG 3); catalytic. similar to RSH2 (RELA-SPOT HOMOLOG), catalytic [Arabidopsis thaliana] (TAIR:AT3G14050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45616.1); similar to RSH2 [Nicotiana tabacum] (GB:AAQ23899.1); similar to RSH-like protein [Capsicum annuum] (GB:AAK82651.1); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain Metal-dependent phosphohydrolase, HD region, subdomain (InterPro:IPR006674); contains InterPro domain RelA/SpoT; (InterPro:IPR007685) Range:  from: 20214541    to: 20217609    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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