Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->LBD16            --------->HSFB2a(2)                                             <------NtERF2            <---------HSFB2a(2)                                            --------->LBD16       <---       --------->ARR11(3)              --------->YAB1                    --------->LBD16     --------       <---------ARR11(3) <---------AHL20(2)                             <---------LBD16<---------MYB46(3) --WOX13(1)<---------LBD16--------->YAB1                             --------->ARR14(2)<---------WOX13(1) ---ATHB5------>ZmHOX2a(2)--------->AHL20(2)               <---------ANAC55(2)      <---------YAB1   aaccaatttgatctccagaaacattcaattatataaaactttcataggcattttcaaaatcatgtaagaagaaaccgcggagaaacctgattgttagcag  20202400                                                    <------ZmHOX2a(2)                                                   --------->ARR11(3)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                   <---------ARR11(3)                                              --------->TOE2(3)                                              --------->TOE1(2)                                         <------NtERF2                                         <---------ZAT2                                        --------->ANAC58                                        --------->ANAC58                           <---------ANAC58  --------->ANAC58                           <---------ANAC58  --------->ANAC58                       <---------MYB52(1)--------->ZAT2                      <-------GAMYB     --------->ANAC46                     --------->MYB52(2) ------>NtERF2------>ZmHOX2a(2)  --------->At4g35610 ---ZmHOX2a(1)       <---------MYB46(3)--------->ATERF1(2)              <---------At4g35610 ->At4g35610        <-------TEIL       <---------ATERF1(2)          <-----------HVH21   <---------GLK1(2)   gattgagagttgaaacaagaggtccgttggcttgccatttgccagcaacgtaagatcccaagttgtgagaagtcagcccaatctcactcagaaactcgta  20202500                                                <---------ARR14(2)                                                --------->GLK1(2)                                   --------->ANAC58                                             -----                       --------->ANAC46    ----------->GT1                                     <-----                      <---------LBD16    ---------->DOF2                                     --------                 <---------CCA1(2) --------->ANAC58                     --------->ANAC58     <-------            ------->TEIL           --------->ANAC46 --------->LBD16     --------->ANAC58    ---------          <---------SPL7--------->LBD16--------->LBD16     --------->ICU4          ---------->DOF2         --------->DEAR3(1)      <-----------GT1--------->ARR14(2)    ---------->DOF2       <--------   ctcgttgttcgccgaacccatctctgcgcaaaaattcaccccagaaagaaaatccagagaaattatcgataacaaagccagagaaaaaagagcaattatc  20202600                                                                                                   <-                                                                                              -------                                                                                           --------->ALFIN1                                                                                          <----------                                                                                          -----------                                                                                         <---------ANAC55(1)                                                                                         <---------ANAC55(2)                                                                                         <---------TGA1a                                 <--------P                                              <---------ANAC46                               --------->ATHB12                                          ============                               <---------MYB46(3)                                        <---------ANAC58                         <---------ANAC55(2)                                             ============ ---->YAB1               --------->ANAC55(2)                      ---------->DOF2        ============ ----YAB1              <-----------GT1------>ZmHOX2a(2)        ------>ZmHOX2a(2)         --------->TGA1a ->YAB1  XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B                    <---------ARR11(3)          <---------O2 --ICU4  <------ZmHOX2a(2)  ------>MYB46(1)                  --------->ARR11(3)          --------->O2 >ICU4  <---------ARR11(3)  ------>MYB83                --------->GLK1(2)                <---------ANAC58 -ATHB12--------->ARR11(3)  --------->MYB52(1)   --------->CCA1(2)=================================bZIP_DOF   agaactcgaagatcagagaaaaaaatcacctaatggttgatcgtatcgaagaaatgagcttctgatcttaaagagggagtgagagagagagacgtgtacg  20202700                                                                               <---------ANAC46                                                                             --------->ZAT2                                                                             --------->At4g35610                                                                             <---------At4g35610                                           <---------YAB1                 <---------At4g35610                                  <---------ANAC46                        --------->ZAT2                                 <---------At4g35610                 <---------ZAT2                 <  ----------->GT1                --------->At4g35610   <---------ANAC46   <---------ZAT2            < ---------DOF2                  <---------MYB46(3)    <---------LBD16--------->At4g35610           -- >TEIL   ---------->DOF2  ------------>AtMYB77       --------->MYB52(1)   --------->At4g35610      <- -----AtSPL3 --------->TOE1(3) <--------P  <---------AHL20(2)     ---------->DOF2                  -- ---->AtSPL8----------->GT1  <---------MYB46(3)     ----------->HVH21--------->ZAT2               *TSS ======================================MYC_MYB     <---------WOX13(1)<---------At4g35610  ------>ZmHOX2a(1) =========bZIP_DOF        --------->MYB52(1)--------->ATHB12    --------->ANAC58          =========== =========bZIP_DOF     --------->ANAC46 <---------AHL20(2)      --------->ANAC58          <----------DOF2   tcttttgtaaaaaaagcttaaaaacaaacaacggttgctgatttttttattggattgacggagaagacgaaagctgagctgctgtgttcatcctttccca  20202800                                     ------->MYC2                                     <-------MYC3                                     ------->MYC3                                    --------->ANAC55(2)                                    <---------ANAC55(2)                                    <---------ANAC58                                    <---------ANAC55(1)                                    <---------TGA1a                                    <---------bZIP60(2)                                    =======================bZIP_DOF                                    --------->TGA1a                                    <---------ANAC46                                    <---------O2                                    --------->O2                                    <---------ANAC58             <---------ANAC58    ----------->HVH21              ----------->RAV1(1)      <---------YAB1  --------->TGA1a<-------MYC2              <---------WRKY38(1)     <---------AHL20(1)         <-----------HVH21          --------->LBD16     <---------AHL20(2)       <-------MYC3                <---------ANAC58   <---------YAB1     ========================bZIP_bZIP   <---------ANAC58 ---------AHL20(2)    =====================================bZIP_DOF ---------YAB1        --------->bZIP60(1)                <---------LBD16                        ----- ------->YAB1<---------ANAC58 ------->MYC3         <---------ANAC58                            <----- --------AHL20(1)     <---------bZIP60(1)          <---------ANAC58--------->TOE2(3)   <---------MYB46(3) ------->AHL20(2)     --------->ANAC46          <----------DOF2<---------WRKY12    <------ZmHOX2a(1) ===============================bZIP_DOF   ------>ZmHOX2a(1)  --------->WRKY18(1)  ==================   atattattatttttggcttcactcacatcacatgtgtcacgtgtcctatgctttcgttttccgggtcaacataaacccgaatagaggagttgttgttatc  20202900                    --------->TOE1(1)                                                               <                    --------->TOE2(1)                                                             ---                   ------>ZmHOX2a(1)                                ------>NtERF2                <---              --------->YAB1 <-----------RAV1(2)                   --------->ANAC46              <---             =============HOX2a_HOX2a                            <---------At5g28300            <---- ---->YAB1   <------ZmHOX2a(2)          <---------TOE2(3)       <-----------GT1         <------------CBF ----YAB1   <---------ARR11(3)         --------->AHL20(2)     <----------DOF2          --------->ATHB51 ===================HOX2a_HOX2a        --------->YAB1     --------->LBD16              --------->ATHB12   atcgacattgccacgatcatcctcgtatgggccaggcccattaatatttgttcatcaaaccgggttttaccgccactaaaacgaatcaactattggtttc  20203000                               <----------DOF2                              ------>ZmHOX2a(2)                             =================================HOX2a_HOX2a                             <------ZmHOX2a(2)                            --------->ARR14(2)         <------ZmHOX2a(1)                            --------->ARR11(3)        ----------->GT1    <-----------------AGL1  <---------ARR14(2)      <-----------RAV1(2)    <-----------------AG    <---------ARR11(3)    <-----------TGA1 ----------->HVH21  --------->ANAC58             <---------ANAC46 -----------HVH21   --------->ANAC58  <----------DOF2 --------->At4g35610 ------>LBD16    ----------->HVH21 <-----------GT1<-----------HVH21                               --- ------ANAC58=======================HOX2a_HOX2a  <---------ANAC58                     *TSS     <----- ------ANAC58========================HOX2a_HOX2a <---------ANAC58                    ------------>CBF -----LBD16  <------ZmHOX2a(1)================================HOX2a_HOX2a   ------->TEIL       ------   cgggtcacccgattaggatgcgacgctaccgatcttttttctttcgattttgcgtcaggagaaaacgattaccacttgaacctttgattcaatctcgtcc  20203100                                                                                                  ---                                                                                                  <--                                                                                          <------ZmHOX2a(1)                                                                                        <---------TOE2(3)                                                                                    <<<<<<<<<<AGL22                                                                                    <<<<<<<<<<AGL20                                                                                    <<<<<<<<<<AGL24                                                                                 <---------------AGL15                                                                                 --------------->AGL15                                                                                <-----------------AG                                                      <---------YAB1            ----------------->AGL2                         <---------ANAC46            ------>ZmHOX2a(2)          ----------------->AG                         <---------ANAC58          --------->ARR11(3)           ----------------->AGL1                         --------->MYB52(2)        <---------ARR11(3)           <-----------------AGL3 ------>ANAC46           <---------ANAC58       <---------TOE1(2)               <-----------------AGL2 ----ZAT18  ------>MYB83<-------TEIL       <-----------HVH21                    ----------------->AGL3 --->ZAT18  ------>MYB46(1)               <-----------RAV1(1)  <---------YAB1<----------DOF2  -------   actaaacgattaccaacaatttctggttcgtggtttctagttcattgtcgcatgatctgattgtgttgatagaattcaactttccatatttaggaatgag  20203200                                                                             <---------WOX13(1)                                                                           --------->ATHB12                                                         <--------P<---------ZAT6                                                         <---------WOX13(1)-------->HAHB4                                                        <-------GAMYB     <---------ATHB12 ------>ZAT14            --------->YAB1                <---------MYB46(3) <---------YAB1 -------ZAT14           <---------YAB1            <---------AHL20(2)      --------->ICU4--------->TOE1(3) -->YAB1             <----------DOF2       --------->GLK1(2)  ------>ZmHOX2a(2)         --------->TOE2(3)   aacactctgaatttcatgtatagcttttgataagagtgaatgaagaatctatatttttggttgatcgtagtggcaaatgattggggtttaccttgaaggt  20203300  Previous    Next  AGI:  At1g54100.1    Description:  ALDH7B4 (ALDEHYDE DEHYDROGENASE 7B4); 3-chloroallyl aldehyde dehydrogenase. Identical to Aldehyde dehydrogenase family 7 member B4 (ALDH7B4) [Arabidopsis Thaliana] (GB:Q9SYG7;GB:Q546B7); similar to ALDH5F1 (SUCCINIC SEMIALDEHYDE DEHYDROGENASE), 3-chloroallyl aldehyde dehydrogenase/ succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G79440.1); similar to aldehyde dehydrogenase family 7 member A1 [Euphorbia characias] (GB:AAX09646.1); similar to Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1) (Brassica turgor-responsive/drought-induced gene 26 protein) (Btg-26) (GB:Q41247); similar to Aldehyde dehydrogenase family 7 Range:  from: 20198932    to: 20202798    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g54110.1    Description:  cation exchanger, putative (CAX10). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68312.1); contains domain PD119426 (PD119426) Range:  from: 20203086    to: 20205397    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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