Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------GLK1(2)                        <---------ARR11(3)                  <---------ANAC58                  <---------ANAC46                  <---------ANAC55(2)                  <---------ANAC58                                           <---------YAB1                 <-------TEIL                                           <--------HAHB4        <---------ARR11(3) <---------------AtSPL8                    <---------ZAT6        --------->ARR11(3) --------------->AtSPL8                  ----------->GT1 ---------ZAT2  <---------ANAC46                           --------->ANAC55(2) ---------At4g35610     --------->ARR11(3)                 <---------O2 --------->YAB1 -------->At4g35610   ----------->ARR10 --------->ARR11(3) --------->O2<---------YAB1 -------HVH21<-----------RAV1(1)        <---------ARR11(3) <---------TGA1a<---------YAB1   tcagctctaaaatctatggtgcgtaagattttgtacatgtaatatctatctgtttttgtagacgtgatatagtattattatgtttgcagtcaaaaattct  20196200                                                                                    <---------ANAC46                                                                                  --------->ATHB12  -                                                                                  <---------WRKY18(1)                                                                                 ----------->HVH21  <                                                              ----------->HVH21<---------ANAC58    <-                                                      <---------At4g35610      <---------AtLEC2    <-                                                      --------->ZAT2  <---------------AGL15     <----                                                 --------->At4g35610 <-----------------AGL2     -----                                       <---------ATHB12   <------NtERF2 <---------YAB1----------->GT1            <---------TOE2(3)     --------->At4g35610 --------->At4g35610      <---------ANAC58<-----           ---------->DOF2        <---------At4g35610 <---------ZAT2 <-----------------AGL3   -------  ----------->GT1        <-----------GT1     --------->MYB52(1)      ================================   aaacatgttaaactaaagtttgcagattaacatggctgctaatcaaacaacagcttagctggcgatgacaaactattactggcatgactggtaatttcca  20196300             --------->ATHB12            --------->AHL20(2)                              <---------ALFIN1            <---------AHL20(2)                             -------->P       <---------At4g35610                    <-----------GT1 <<<<<<<<<TAC1       <------NtERF2                    <---------ANAC46   ------>MYB83                    <---------ANAC58 -------->MYB52(1)                      ----------->GT1    ------>MYB46(1)            <---------WOX13(1) ---------ICU4                       --------->ALFIN1     ----------->RAV1(1)       --------->ATHB12 --------ATHB51                    =================================MYC_MYB        <---------AHL20(1) --------ATHB12<---------WOX13(1)  --------->O2          --------->AtMYB61         <---------AHL20(2) -----------AGL15                  --------->TGA1a  <---------MYB52(2)             --------->AHL20(1) ---------->AGL15                  <---------TGA1a--------->MYB52(1)               --------->AHL20(2) ------------AGL3                  <---------ANAC46 --------->MYB46(3)        ------>ZmHOX2a(1) ---------->AGL3                   <---------bZIP60(2)  --------->MYB46(3)   --------->TOE2(3)     -- ===========MADS_MADS              <---------O2 <---------MYB52(2)      <-----------GT1    <---------ANAC58   aataatggcagcgattaattggtctaaacatatgcagacgtggagtattaactaacaaaccaacactgtcttattttctccttaattaattggtcgtggt  20196400                                                         --------->ARR14(2)                                                    ---------->DOF2                                               ----------->RAV1(1)                                              --------->ANAC58                --------->ETT(2)              --------->ANAC46                <---------WRKY38(1)           --------->ANAC58           <---------At5g28300                <---------ETT(2)          <-----------GT1                <---------LBD16 <---------ARR14(2)      <---------YAB1                    <-----------GT1 <------ZmHOX2a(1)   <---------AHL20(2)      --------->AHL20(2)--------->SPL7 <---------MYB46(3)             --------->AHL20(2) ------->ICU4   <---------ETT(2)   <---------AHL20(2) <---------TOE2(3)                  <----------DOF2   catgttttatttttacggtcgacccaaaaaaaaatgttttatttacggacgacacaaaggatttgttgaagagtctcttcaacaaaaattcctttaaatt  20196500                                               <---------ALFIN1                  <---------ARR11(3)          --------->ZAT14                  --------->ARR11(3)   <---------GLK1(1)                 <---------GLK1(1)     --------->GLK1(1)            <---------ANAC58        --------->ANAC58            <---------ANAC58        --------->ANAC58         <----------DOF2         <---------ATHB12--------->ANAC46                  --------->ZAT18    --------->GLK1(2)        <---------------AGL15                    ---------->ARF1   --------->ARR14(2)        --------------->AGL15         --------->DAG2       <---------ANAC58   <---------ARR14(2)       ----------------->AGL3        ---------->DOF2       <---------ANAC58   <---------GLK1(2)        ----------------->AGL2    <------ZmHOX2a(2)     ---------->DOF2   ccgacgattctctttcttgatatctgtctctccaaatcaagaaatctctccactcgatcaaaaagctctcttgtctaacaaagcttgcactaaatttcca  20196600                                                                                               <-----                                                                                               <-----                     --------->ATHB12                                                       <--------           <---------ANAC58                       <----------ID1               <---------GLK1(1)           <---------ANAC58    ---------->DOF2  ---------->DOF2             <---------YAB1  <--------       ---------->DOF2        *TSS  <---------REM1(1)   ---------->DOF2   --------->YAB1    <--------   <----------ID1 <----------DOF2  ------------------------>ANAC81       --------->ICU4     <--------   aaaaaaaaacaaagcttgcactttgatttgatcaaaagttgaagcaaaaaaaaagacaaaaagaacatcgctgaaatgatgaattctgagtcttgcttgg  20196700    <---------ARR14(2)    --------->ARR14(2)    <---------ARR11(3)    --------->ARR11(3)                                                                        <------ -MYB83                                                                                      -------- -MYB46(1)                                <---------At5g28300                        --------->ANAC58 -ANAC46                                  <---------LBD16                            --------->ANAC58 -AtLEC2                     <-----------GT1                                      --------->STY1(2) -ANAC58            --------->ARR11(3)<----------DOF2                  ---------->DOF2       -------- -ANAC58          --------->ICU4   <---------ARR11(3)            --------->ALFIN1 <---------STY1(2)--   tttgaagttcttcttagaaaatgattttgtttttcgagctcttttacggcgaagtacaagttgcagagtgggagaaagagagatagctagcaaaaccttt  20196800                                             <-------TEIL                                            --------->CCA1(2)                                           --------->ARR14(2)           <---------------AtSPL8          <---------ARR14(2)           --------------->AtSPL8          --------->ARR11(1)          --------->ANAC55(2)         ----------->RAV1(1)          <---------ANAC55(1)         --------->MYB52(1)          <---------ANAC58    --------->ANAC46        <-----------GT1       <---------ANAC55(2)     <---------ICU4           --------->ANAC55(1)         <--------P    --------->AHL20(2)        --------->ANAC55(2)      --------->DAG2                            ----    <---------AHL20(2)        --------->ANAC58    --------->At4g35610            --------->ARR14(2) ----DOF2 <---------ANAC58    --------->ANAC58    <---------At4g35610            <---------ARR14(2) ->TOE1(3)<---------ANAC55(2)<-------TEIL  <---------GLK1(2)                     <---------GLK1(2) ->TOE2(3)<---------ANAC46 --------->TOE2(2)--------->ARR14(1)<---------ZAT6  --------->YAB1<-------- ------->TOE2(3)         <-------TEIL--------->ANAC46---------->DOF2<-----------GT1<-------TEIL  <---   acataaatatttacgtgtacataaatatacatacgttacacaacagattcgcagcaaaaggttagtgttttaactacgaatcagattcgtctctgttttt  20196900                                                                                      --------->GLK1(1)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                    <------ZmHOX2a(1)                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                           --------->At4g35610   <--------P                                                          ------>ZmHOX2a(2)   <---------TOE2(2)                                                <---------AHL20(2)           <------NtERF2                                               <---------AHL20(2)          <---------DEAR3(1)                                               --------->AHL20(2)         --------->ATERF1(1)                                    ----------->HVH21     =================================HOX2a_HOX2a                                    <---------YAB1       <------ZmHOX2a(2)<------NtERF2  ----------->GT1                 --------->CCA1(2)      ==================================HOX2a_HOX2a ----->AHL20(2)                  <---------ARR14(2)   <---------ANAC58   <-----------HVH21 -MYB52(1)   <---------TOE2(3)   --------->ARR14(2)   <---------ANAC58  --------->DEAR3(1)<---------AtLEC2 ------AHL20(2)     --------->ANAC55(2)  --------->At5g28300       ---------->DOF2 ----------->ARR10   taaatggctaattttgatgtttatgtaataacacagatatgactgtgaatttaatggcgatcgctgaatcaaagccgtcggaggtaggatttgcaagatg  20197000                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                       <---------AHL20(2)                                                                 <------NtERF2                                <-------GAMYB                   --------->LBD16                               <------NtERF2             --------->ARR14(2)                               ----------->GT1           <---------ARR14(2)                              ------>NtERF2              <---------REM1(2)                              --------->LBD16 <---------SPL7--------->ANAC46                              <---------MYB46(3)--------->SPL7  ------>NtERF2                             <---------ANAC46 <---------ZAT14  <---------LBD16                   <------ZmHOX2a(1)          --------->ZAT18  <---------ANAC46                     -                <------ZmHOX2a(1)            <---------ANAC58  --------->LBD16        --------->ZAT14      <---------ANAC46      <---------LBD16  <---------ANAC58 <---------LBD16         <---------ZAT14     <---------LBD16      --------->ANAC46  <---------------AtSPL3     --------->AHL20(2)           < <-----------RAV1(1)     <---------LBD16    <---------------AtSPL8     --------->AHL20(1)         <-- --------->HSFB2a(1)   <---------REM1(2)   <------------------SPL14    <---------AHL20(1)        <---   cgaatgttgcggtatgaaggaggaatacacggcgggttatatagagagcgtacggtgtctatacgccgggaaatttatttgtggtctctgctctgaggca  20197100  Previous    Next  AGI:  At1g54095.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72510.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72510.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN73516.1); contains InterPro domain Protein of unknown function DUF1677, plant (InterPro:IPR012876) Range:  from: 20196630    to: 20197535    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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