Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ALFIN1                                                               --------->ANAC46                                                             <---------ALFIN1                                                             --------->ANAC46                                                             --------->ANAC58                     <---------AHL20(2)                      --------->ANAC58                    <---------AHL20(1)                     <---------ALFIN1                    --------->AHL20(1)                    <---------ETT(2)                    <---------AHL20(2)              --------->ARR11(3)                    --------->AHL20(2)             <---------CCA1(2)                    --------->ARR11(3)            --------->ARR11(3)                    <---------ARR11(3)            <---------ARR11(3)                   --------->AHL20(2)             <---------AHL20(1)   <---------YAB1  --------->ATHB12                 --------->AHL20(2)               --------->AHL20(1)   <---------AHL20(2)             --------->AHL20(2)                  --------->AHL20(2)   --------->AHL20(2)    --------->AHL20(2)                <---------TOE2(3)   <---------ZAT18             <---------YAB1    <---------AHL20(2)      ---------->DOF2----------->GT1--------->ZAT14    <----------DOF2 ------>ZAT6 <---------AHL20(2)      ---------->DOF2<---------ARR11(3)<---------AHL20(2)--------->TOE2(3)   acacaataaatgaaattaaaaatatatttgtaaagacattaaagatggcaaatatatctgtccacaccacattttaattcttttttatatcattagtcta  20135600                                    <---------YAB1                                    <---------ANAC46                            ----------->GT1                          ---------->DOF2                      --------->HSFB2a(2)                                    <----------DOF2                      <---------HSFB2a(2)                                    <---------DAG2                 --------->ANAC55(2)<---------ANAC55(2)          <----------DOF2    <-----------GT1                --------------->AGL15                <---------AHL20(2)  ------->GAMYB               <-----------GT1   --------->ICU4      --------->AHL20(2) <---------MYB52(2)          <---------TOE2(3)--------->DAG2        --------->AHL20(2)     --------->MYB46(3)  <--------   taacatttgattaagtttcacgttttagaaaagtgattatgtataaactaaaaatataaatagattactttacaacaaacttttttttagcattttacat  20135700                                                         -------->ATHB1                                                         <---------ICU4                                                         --------->YAB1                                                        <---------ATHB12                                                      --------->WOX13(1)                                               <---------DAG2                                               <----------DOF2                                      -                --------->YAB1              ---------->ID1                               ----------->GT1            --------->MYB46(3)              <-----------GT1                             <---------TOE1(3) ---GT1<-----------GT1--------->ARR11(3)   <-----------GT1                      --------->MYB59     <   ttgttcatttaacaacaactataacatattgaattcgagtttttttttccttttcccaatcattccattgaatgtatgagtttaggtcttagggttattt  20135800                              --------->ANAC58                                                 <-----                         --------->ANAC46                                                      ------                         --------->LBD16                                                       ------                         <---------ETT(1)                                         ---------->DOF2            --------->DAG2    --------->ANAC58                         <------------CBF       -------           ---------->DOF2------>NtERF2             ----------->GT1  <---------AHL20(2)       -------  <---------YAB1----------->GT1                    --------->DAG2    <---------YAB1        --------->ZAT14 -------->At4g35610     <---------HSFB2a(2)       ---------->DOF2   <---------AHL20(2)   --------->ANAC46 ---------At4g35610<---------ICU4     >>>>>>>>>>>>>>>>>LFY          --------->AHL20(2)   --------->bZIP60(2)   tctgatgaatagcaaaagtagtaattcccgacaagaaattggccaatgtcgaaaaagtcaaattccacattttaattgagacataaaagacacatcactc  20135900         --------->CCA1(1)         --------->RVE1(1)                                  <---------At4g35610   --------->At5g28300<---------AHL20(1)                *TSS<---------CCA1(2)  ----------->GT1     --------->ARR11(3)               --------->bZIP60(2) ----------AGL15     ----------->TBP                   --------->ANAC46 --------->AGL15   --------->AHL20(2)                <---------ALFIN1 ------>CBF     <----------DOF2                 <---------At4g35610 -->ANAC58--------->ARR11(3)                    --------->At4g35610                           <------ -->ANAC58<---------ARR11(3)                 <---------At4g35610                             --------   aatacagtaaaatatctacttttatatattcccaaaaaccattcggcttctgcttccacttcatctctctctctctctcccttctcacatttctctccac  20136000  <---------GLK1(1)                        <---------MYB52(1)             ----------->GT1  --------->GLK1(1)                       <-------GAMYB              <-------TEIL <---------GLK1(2)                       <-----------RAV1(1)        --------->CCA1(2) --------->ARR14(2)--------->CCA1(2) --------->RVE1(1)              --------->GLK1(2) ---ALFIN1    ---------->DOF2       --------->ARR11(3)             --------->ARR11(1)               < ->ZAT14     ------>ZmHOX2a(1)      <---------ARR11(3)    ----------->HVH21                   <------   tcagatttccaattcctaaagatagagagaatgactaaaatctctgttggattgcaacttgtgacaagagattcgagggaaaaactaaacaatatagtga  20136100 --------->ARR11(3)                   <---------HSFB2a(2) <---------ARR11(3)                   --------->HSFB2a(2) <-----------ARR10                    <---------LBD16 <---------ARR14(2)                --------->ARR11(3) ------>ZmHOX2a(1) --------->ARR14(2)    <------ZmHOX2a(2)             --------->TOE2(3)                             -- ---------CCA1(2)     <---------ARR14(2)             --------->TOE1(3)        <-----------GT1      <- ---ZAT6              --------->ARR14(2)     <----------DOF2   <-----------HVH21               ------   tcaaatcttcactgagactaaaccgatccaatccaaacatctcggagctttgtttccttaaaacatgtcatctctgcaataaacaactccatcaagacaa  20136200                         <---------AHL20(2)                     <---------CCA1(1)                     <---------RVE1(1)                    --------->ARR11(3)                  <---------TOE1(1)                  --------->ANAC58                                   --------->ARR11(3)                  --------->ANAC58            --------->AHL20(2)     <---------ARR11(3)      <-------             <---------------AtSPL3   <-----------GT1          --------->ANAC58             <-------- ------->ARR11(3)<-------TEIL     <---------YAB1  <-----------GT1---------->DOF2            --------- --------ARR11(3)--------->SPL7   <---------AHL20(2)           --------->ANAC58             <-------- ---->DOF2   <---------------AtSPL8  <---------YAB1            --------->ANAC46    <---------GLK1(2)   agatgtttacatgtacaggtacgatatttttttttttttattactatattatatactctttgtaaacgaaagatgttctgttcttgattctcaatttttt  20136300                                                                    <---------YAB1                                                         --------->ARR11(3)                                                        <---------At4g35610                                                        --------->At4g35610                                                      <-----------RAV1(2)                    --------->CCA1(2)            ---------->DOF2   <---------TOE2(3)   <---------HSFC1(2) --AHL20(2)        <---------ARR14(2)      --------->ZAT14        --------->YAB1       <---------HSFB2a(1) -AHL20(2)         --------->ARR14(2)      --------->ZAT18      <---------WOX13(1)     --------->HSFC1(2) >AHL20(2)       ----------->ARR10         <---------ZAT14    --------->ATHB12 --------->ARR11(3) -AHL20(1)      <------ZmHOX2a(1)         --------->ALFIN1   <---------YAB1---------->DOF2   ttttttgttgaaaacagaggagatttgggattttgtagtagagagtgcagagaaagtcagatgttgattgatgatagaaaagaactagaggcttcgacga  20136400                                                                                          <---------AHL20(2)                                       <------NtERF2                                <-----------HVH21                                     <---------ANAC46                              <---------O2                                     --------->RAP2.3(2)                           --------->O2                                    --------->RAP2.3(1)                            --------->bZIP60(1)                                    --------->ATERF1(1)                            --------->bZIP60(2)                                    <---------LBD16                                <---------bZIP60(1)                                    <------NtERF2                                 <-----------STF1                                   <---------ERF1                                ------>NtERF2                                   <---------RRTF1(1)                           --------->DEAR3(1)                                   ------>NtERF2                               --------->ATERF1(1)                                   <---------ATERF1(1)                         <------NtERF2                                   <---------RAP2.6(1)                        ------>NtERF2                                   <---------RAP2.3(1)                        <---------ATERF1(1)                                  <---------DEAR3(1)                         --------->DEAR3(1)                                  <---------RAP2.3(2)                        <---------DEAR3(1)                                 --------->RAP2.3(1)                         ----------->HVH21                                 --------->ATERF1(1)                        --------->ATERF1(1)                                 <---------ABI4(2)                         <---------ATERF1(1)                                <---------RAP2.3(1)                        ------>NtERF2  --------->ATHB51                                ------->GAMYB                              --------->LBD16--------->AHL20(2)                              <---------At5g28300                         <---------DEAR3(1)                             <-----------GT1                             <---------LBD16  <--------HAHB4                --------->DEAR3(2)--------->DEAR3(1)                   ------>ZmHOX2a(2)  -------->ATHB1               --------->SPL7--------->MYB52(1)     <---------LBD16   --------->GLK1(1)  <---------ATHB51             <---------SPL7  <---------ICU4--------->DAG2             <---------GLK1(1)  <---------ATHB12            <---------ANAC46--------->ICU4---------->DOF2            <---------ARR11(3)  --------->ICU4   <-----------RAV1(1) ----------->GT1--------->LBD16                --------->ARR11(3)--------->WOX13(1)   agatgatgttggcttcgtacagacgatgtaataacggcgccggaaaaagcgagtctcggaatttgtttgatgatctccggcgacgacgtcaattatttat  20136500  Previous    Next  AGI:  At1g53903.1    Description:  similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G53885.1); similar to Protein of unknown function DUF581 [Medicago truncatula] (GB:ABO84791.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 20135956    to: 20136685    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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