Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ICU4                                                                  --------->ATHB51                                                                  <--------ATHB1                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                 <---------ATHB51    <---------AHL20(2)                                              <-----------ARR10  <---------ATHB12    --------->AHL20(1)                                              --------->GLK1(2)  --------->ICU4      <---------AHL20(1)   --------->MYB52(1)                        <---------GLK1(2) --------->YAB1       --------->YAB1  <---------WRKY12                  ------->GAMYB            <---------MYB52(2)     --------->AHL20(2)  <---------WRKY38(1)             --------->At4g35610   --------->ANAC58           <---------YAB1 -HVH21                       --------->AtMYB61         --------->ANAC58       --------->TOE2(3)   ttggacaacggatagaacacaaatggaatggaccacaactgaagaccgattctaagcctagcaactaataatttgaagttatcttattatattgtatgaa  20130900                                                             ------->GAMYB                                                            --------->MYB46(3)                                                    ============================================bZIP_DOF                                                    --------->O2                                                    ----------->GT1                                                    =================MYC_MYB                                                    --------->bZIP60(1)                                                    <---------ANAC55(2)                                                    <---------O2                                                    --------->ANAC58                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC55(2)                                                    --------->ANAC55(1)                                                    --------->TGA1a                <-----------GT1          --------->YAB1     <---------MYB52(2)        --------->DAG2          --------->AHL20(1)   ------->TEIL         <---------TGA1a                  ---------->DOF2          <---------ARR11(3)  <---------CCA1(2)     <---------bZIP60(1)       <---------MYB52(2)          <---------AHL20(1)  <---------ARR14(1)    --------->bZIP60(2)       --------->MYB46(3)    <    <-----------GT1           <---------GLK1(2)   <-----------GT1        ----------->GT1 <------ZmHOX2a(1)   cagttttttcaatattttttgctctattaatcgaatctcacaatcacattagtcacgttacaacgaccagacatgtagtaacaaacaaaaaggaccatac  20131000                                                                     ------->TEIL              ------                                                             <---------AHL20(2)                <-----                                                            <---------YAB1                     <-----                                                           <---------AHL20(2)         --------->ALFIN1                                                      <---------MYB52(1)             ------->MYC3                                            <---------ARR11(3)      <---------CCA1(2)<-------MYC3   < ---------AHL20(2)     --------->AtMYB61--------->REM1(1)<---------YAB1     <------------CBF   ------   atttttttttgtttaacaaaaacgaccatacatgttatcgctacatgattttctctgttatttttattttgtatctcacattgaacatgtggacgaagac  20131100          <---------AHL20(2)         --------->AHL20(1)         <---------AHL20(1)        <---------AHL20(2)      --------->AHL20(2)      <-----------TBP      <---------AHL20(2)                                         ----------->TBP    ----------->TBP                                          <-----------TBP --->ARR14(3)                                            ----------->GT1 ----ARR14(3)                                 <---------------AGL15 ----ARR11(3)            --------->ANAC58     --------------->AGL15                         --------- ---------ANAC46         --------->ANAC58  <---------------AGL15 <---------AHL20(2)       <---------YAB1 --->ARR11(3)            --------->ANAC46  --------------->AGL15 --------->AHL20(2)  <-----------GT1   cttcgtatatatatattttctaatgacacaccaaaaactgaattactactactagtagaaagtatatataaatgcgaagaagacatataactatcattca  20131200                                                  --------->SPL7                                                 ------>MYB46(1)                                                 --------->MYB52(1)                                               ------->GAMYB                                             --------->MYB52(1)                                            ------->GAMYB                                           <---------MYB55(2)                                           <---------MYB52(2)                                           --------->MYB46(3)                           ------>NtERF2                                           <---------MYB111(2)         --------->ANAC55(2)                                  --------->AHL20(1)                 <-----------GT1    --------->LBD16                  <---------ICU4  <---------AHL20(1)           ------>MYB83            <---------DEAR3(1)                 ------------>CBF --------->ARR11(3)           ------>MYB46(1)        <---------LBD16     --------->YAB1              --------->AHL20(2)       <------ZmHOX2a(1)      --------->GLK1(1) >WOX13(1)   --------->AHL20(2)  <-----------TBP ------>MYB83<---------MYB59     <---------GLK1(1)   gagccaaacataaaaaaaaatcaatacatatgcaaatatatagcaacaaccgaacgatgaggaccaaattttcacttaatctgatttctccggcgaagaa  20131300                              ------>ZmHOX2a(1)                            <---------ANAC46                          <---------ARR14(2)                          --------->ARR14(2)                       <---------ANAC58                 --------->ANAC58                 <<<<<<<GRF7<---------ANAC58            --------->ANAC58               ----------->HVH21          <---------ANAC58                  <---------LBD16               ------>ZmHOX2a(1)          <---------ANAC58              --------->MYB52(1)             <---------ICU4 <---------ANAC58--------->ALFIN1      <---------SPL7  ---------->DOF2         <-------TEIL  <---------ANAC58   <---------ANAC46       --------->DEAR3(1)          <-------   catggtgaagattcatcctgacaaggcgtttcctgtggattttagcgtgggagaaggcaagacttcgccgtacttaacgacggagaaagagagtttcacg  20131400                                  <---------At4g35610                     --------->YAB1<---------ALFIN1                                <---------YAB1          ------>ZmHOX2a(2)       <------NtERF2                                  <---------ICU4         <------ZmHOX2a(2)        <---------ZAT14                                --------->YAB1         --------->GLK1(1)        --------->ZAT14                               <---------YAB1         <---------GLK1(1)        --------->ZAT18  ---------->DOF2        ----------->GT1        --------->ARR11(3)        --------->At4g35610                  <---------ANAC46 ----GT1<---------ARR11(3) ---------->DOF2  <---------YAB1 --------->TOE2(3)    --------->ICU4  <----   atttggatgagatctcttgtgtttcatagtaaaggctgcacagtttttgattccaaaggaaacttaatctatcgagtggataattataactccaagagtt  20131500                                                --------->TOE2(3)                                                <---------------AGL15                                                --------------->AGL15                                               <---------bZIP60(1)                                <---------ARR14(3)                                --------->ARR11(3)                                --------->ARR14(3)                          ----------->GT1      --------->ANAC55(2)                         --------->ANAC58      <---------ANAC55(2)           <---------DAG2--------->ANAC58      <---------ANAC46           --------->TOE2(3)    --------->GLK1(2)        <-----------GT1  --------->ANAC46      <----------ID1    --------->AHL20(2)             -----  <---------ZAT14       <---------LBD16 <-----------GT1----------->GT1                <---------YAB1 -----REM1(1)     ------->TEIL  <---------ARR11(3)    --------->DAG2            <---------TOE1(2)   -   gtagtgaagtttaccttatggacttatacggcaaaatcttgtttacattacgtcaaaaggtaaacaataaaacatatcatcttatgttcttatagttttc  20131600                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 ------->GAMYB                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                      --------->CCA1(2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    <------ZmHOX2a(1)                                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     --------->HSFB2a(2) <---------ARR14(2)     <---------LBD16                                     <---------HSFB2a(2) --------->ARR11(3) xxxxxxxxxxxxxxxx>smallRNA(i)                             <---------ANAC58           <---------CCA1(2)<-----------GT1  --------->ARR11(3)                             <---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <---------ARR11(3)                           <---------AHL20(2)     --------->KAN4(1)----------->GT1--------->LBD16 ---->TOE2(3)         <---------AHL20(2)         <---------KAN4(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->DOF2     <----------DOF2xxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ttaaaagtattttgttctaactcttttattttcttggttatagaaattgggattattcaaatcttggaaaggatataactcaaccgggacaagatttcaa  20131700                                                                                     --------->WOX13(1)                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                              <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                               <---------ANAC46 <xxxxxxxxxxxxxxxxxxxx                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                               <---------ANAC58 <xxxxxxxxxxxxxxxxxxxx                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                               <---------ANAC55(2) <---------YAB1                                                               <---------ANAC58 <---------YAB1                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                             ------>ZmHOX2a(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               --------->ARR14(2)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)               <---------ARR11(3)                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               <---------ARR14(3)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)               --------->ARR14(3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               --------->ARR11(3)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         >>               <---------AHL20(1)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           >>               <---------ARR14(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxx               --------->AHL20(1)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->YAB1    <x              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <---            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  -----------    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxx xxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx xxxx>smallRNA(fl3)           <-------TEILxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ICU4xxxxxxx xxxxsmallRNA(le3)     ---------->DOF2 <---------YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxx   ctaagaaaaaacttcaagatattgccaaagggttcatcttcatcatacaaagttgtaatgggatcgcgtatagttgatggtgatcatcaatcttgttata  20131800  Previous    Next  AGI:  At1g53900.1    Description:  GTP binding / translation initiation factor. similar to GTP binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT1G53880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62132.1); contains InterPro domain Initiation factor 2B related; (InterPro:IPR000649); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 20131302    to: 20134718    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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