Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  ---                                                                                                -----                                                                                                -----                                                                                                <----                                                        <---------AHL20(2)                      -----                                                       --------->ARR11(3)                     <------                                                       <---------ARR11(3)                    <-------        <---------ICU4                                 <---------AHL20(2)              --------->ARR11(3)        <---------AHL20(2)                             --------->AHL20(1)             <---------CCA1(2)        --------->ATHB51                               <---------AHL20(1)            <---------AHL20(1)    <---------AHL20(2)                                 --------->AHL20(2)            <---------ARR11(3)   --------->AHL20(2)                                 --------->AHL20(2)             --------->ARR11(3) ---------->GT1                                     --------->AHL20(2)               --------->AHL20(1) --------->GT1                                  --------->AHL20(2)                  --------->AHL20(2) ------>DOF2<---------LBD16            --------->AHL20(2)                <---------TOE2(3)   -------- -->GT1 --------->AHL20(2)             <---------AHL20(2)      ---------->DOF2----------->GT1<------- >GT1  <---------AHL20(2)        --------->ZAT6 <---------AHL20(2)      ---------->DOF2<---------ARR11(3)   aaagataaaattatttcggaacatctaatatactaacacaataaatgaaattaaaaatatatttgtaaagacattaaagatggcaaatatatctgtccac  20123000      <---------YAB1      <---------AHL20(2)     <---------AHL20(2)     --------->AHL20(2) --------ALFIN1                                                        <---------YAB1 ------>ANAC46                                                         <---------ANAC46 ---->ANAC46                                                   ----------->GT1 ---->ANAC58                                                 ---------->DOF2 -----ALFIN1                                             --------->HSFB2a(2) ---->ANAC58                                             <---------HSFB2a(2) ---ALFIN1             --------->TOE2(3)            --------->ANAC55(2)<---------ANAC55(2)          < --ETT(2)             --------->ATHB12             --------------->AGL15                <---------AHL20(2) ->ZAT14             <---------YAB1               <-----------GT1   --------->ICU4      --------->AHL20(2) --ZAT18    <----------DOF2                  <---------TOE2(3)--------->DAG2        --------->AHL20(2)   accacattttaattcttttttatatcattagtctataacatttgattaagtttcacgttttagaaaagtgattatgtataaactaaaaatataaatagat  20123100                                                                                            -------->ATHB1                                                                                            ---------                                                                                            <--------                                                                                           <---------ATHB12            <---------DAG2                                                               --------->WOX13(1)            <----------DOF2                                                       <----------DOF2        ------->GAMYB                                                             <---------DAG2       <---------MYB52(2)                          --------->YAB1              ---------->ID1       --------->MYB46(3)  <-----------GT1     --------->MYB46(3)              <-----------GT1 ----------DOF2    <-----------GT1        <-----------GT1--------->ARR11(3)   <-----------GT1   tactttacaacaaacttttttttagcattttacatttgttcatttaacaacaactataacatattgaattcgagtttttttttccttttcccaatcattc  20123200                                                                 --------->ANAC58                                                            --------->ANAC46                                                            --------->LBD16                                                            <---------ETT(1)                                     <---------YAB1----------->GT1                                   <---------At4g35610     <---------HSFB2a(2)         ----------->GT1                        ----------->GT1        --------->DAG2    --------->ANAC58     --------->DAG2 >YAB1                 <---------TOE1(3)      ---------->DOF2------>NtERF2           ---------->DOF2 -ICU4         --------->MYB59     --------->At4g35610<---------ICU4     >>>>>>>>>>>>>>>>>LFY   cattgaatgtatgagtttaggtcttagggttattttctgatgaatagcaaaagtagtaattcccgacaagaaattggccaatgtcgaaaaagtcaaattc  20123300                                      --------->At5g28300                              <---------------AGL15      <---------AHL20(1)                              --------------->AGL15      --------->ARR11(3)                    <-----                              ------------>CBF          ----------->TBP                    *TSS<-----                 ---------->DOF2     ----------->GT1  --------->AHL20(2)                  --------->bZIP60(2)      <------------CBF       --------->ANAC58      <----------DOF2                        --------->ANAC46    <---------YAB1           --------->ANAC58--------->ARR11(3)                         <---------ALFIN1    <---------AHL20(2)    --------->ZAT14    <---------ARR11(3)                    <---------At4g35610   --------->AHL20(2)   --------->bZIP60(2) --------->CCA1(1)                      --------->At4g35610   <---------AHL20(2)   --------->ANAC46    --------->RVE1(1)                   <---------At4g35610   cacattttaattgagacataaaagacacatcactcaatacagtaaaatatctacttttatatattcccaaaaaccattcggcttctgcttccacttcatc  20123400                                     --------->GLK1(1)                        <---------MYB52(1)                                     <---------GLK1(1)                       <-------GAMYB                                    --------->ARR14(2)                      <-----------RAV1(1)                                    <---------GLK1(2) --------->CCA1(2) --------->RVE1(1) ----At4g35610               <---------ALFIN1    ---------->DOF2       --------->ARR11(3) ----CCA1(2)                --------->ZAT14     ------>ZmHOX2a(1)      <---------ARR11(3)    --------   tctctctctctctcccttctcacatttctctccactcagatttccaattcctaaagatagagagaatgactaaaatctctgttggattgcaacttgtgac  20123500                                    --------->ARR14(2)                   <---------HSFB2a(2)         ----------->GT1            --------->ARR11(3)                   <---------LBD16    <-------TEIL                    <---------ARR11(3)                   --------->HSFB2a(2)   --------->GLK1(2)                <-----------ARR10                 --------->ARR11(3) ------>ZmHOX2a(1)   --------->CCA1(2)                <---------ARR14(2)    <------ZmHOX2a(2)             --------->TOE1(3)  --------->ARR11(1)               <---------CCA1(2)     <---------ARR14(2)             --------->TOE2(3) --->HVH21                   <---------ZAT6              --------->ARR14(2)     <----------DOF2   <--   aagagattcgagggaaaaactaaacaatatagtgatcaaatcttcactgagactaaaccgatccaatccaaacatctcggagctttgtttccttaaaaca  20123600                                                            <---------AHL20(2)                                                        <---------CCA1(1)                                                        <---------RVE1(1)                                                       --------->ARR11(3)                                                     --------->ANAC58                                                     <---------TOE1(1)                                                     --------->ANAC58            --------->AHL20(2)                                                <---------------AtSPL3   <-----------GT1          ---                                  --------->ARR11(3)<-------TEIL     <---------AHL20(2)           ---             <-----------GT1      <---------ARR11(3)--------->SPL7   <---------YAB1  <-----------GT1- ---------HVH21               ---------->DOF2   <---------------AtSPL8  <---------YAB1            ---   tgtcatctctgcaataaacaactccatcaagacaaagatgtttacatgtacaggtacgatatttttttttttttattactatattatatactctttgtaa  20123700                                                                                            ---------                                                                                           --------->At4g35610                                                                                           <---------At4g35610    --------->ARR11(3)                                                                   <-----------RAV1(2)    <---------ARR11(3)      <---------AHL20(2)         --------->CCA1(2)            ---------->DOF2 ------>ANAC58             <---------AHL20(1)         <---------ARR14(2)      <---------ZAT14 ------>ANAC58             --------->AHL20(2)         --------->ARR14(2)      --------->ZAT18      <- --------->DOF2            <---------AHL20(2)       ----------->ARR10         --------->ZAT14    ---- ------>ANAC46    <---------GLK1(2)                <------ZmHOX2a(1)         --------->ALFIN1   <----   acgaaagatgttctgttcttgattctcaattttttttttttgttgaaaacagaggagatttgggattttgtagtagagagtgcagagaaagtcagatgtt  20123800                                                                          <------NtERF2                                                                        <---------ANAC46                                                                        --------->RAP2.3(2)                                                                       --------->ATERF1(1)                                                                       <------NtERF2                                                                       <---------LBD16                                                                       --------->RAP2.3(1)                                                                      <---------RAP2.6(1)                                                                      <---------RRTF1(1)                                                                      ------>NtERF2                                                                      <---------ATERF1(1)                                                                      <---------RAP2.3(1)                                                                      <---------ERF1                                                                     --------->DEAR3(1)                                                                     <---------DEAR3(1)                                                                    --------->RAP2.3(1)                                                                    <---------ABI4(2)                                                                    --------->ATERF1(1)                                                                   ------->GAMYB                                                                   <---------RAP2.3(1)   <---------YAB1                                                <---------At5g28300  <---------TOE2(3)                                             <---------ICU4--------->DAG2 --------->YAB1       <---------HSFC1(2)           --------->DEAR3(2)<---------RAP2.3(2) >ARR11(3)            --------->HSFC1(2)          --------->SPL7<-----------GT1 --------WOX13(1)     <---------HSFB2a(1)       <---------SPL7  --------->MYB52(1)     <---------LBD16 ----->ATHB12 --------->ARR11(3)               <---------ANAC46--------->ICU4---------->DOF2 -----YAB1---------->DOF2             <-----------RAV1(1) ----------->GT1--------->LBD16   gattgatgatagaaaagaactagaggcttcgacgaagatgatgttggcttcgtacagacgatgtaataacggcgccggaaaaagcgagtctcggaatttg  20123900  Previous    Next  AGI:  At1g53885.1    Description:  senescence-associated protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53903.1); similar to Protein of unknown function DUF581 [Medicago truncatula] (GB:ABO84791.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 20123391    to: 20124126    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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