Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------->YAB1 --------ICU4 ------>MYB46(3)                                                   --------------------->WRI1 -------ATHB12                         <---------MYB52(2)   --------->DAG2             --------->KAN4(2) ---->P                            <------ZmHOX2a(1) <---------ARR14(2)               <----------TaMYB80 ---->WOX13(1)            --------->GLK1(1)         <------ZmHOX2a(1)                 <---------KAN4(1) >WOX13(1)                <---------GLK1(1)       <---------TOE2(3)--------->TOE2(3)  --------->KAN4(1) >DOF2 <----------DOF2--------->HSFB2a(2)--------->MYB52(1)---------->DOF2           ---------->TaMYB80   accattaccctttcttcaaaatttctcgatttccataggaaactaacaaattgaggaatcgaaaagttaccttgatagcttcaatggcatattccacttg  20109300                          --------->ZAT18                                               --------->MYB52(1)                          <---------ZAT14                                              --------->TOE1(2)                          <---------ZAT18                                             <---------MYB52(2)                          --------->ZAT14                                      --------->ANAC58                    --------->DAG2             <-----------ARR10           --------->AtMYB61                   ---------->DOF2    --------->YAB1                     ----------->RAV1(1)             --------->LBD16 --------->ANAC46  --------->ARR14(2)--------->YAB1--------->ANAC58     -            <---------HSFB2a(2)     <-----------HVH21    ----------->RAV1(1)   --------->ANAC46     -            --------->HSFB2a(2)  ------>ZmHOX2a(1)    --------->ANAC46 --------->MYB46(3)  --------->ATHB12   aaatagccttccttctggagaaaaagtgttcactcctctgtcatactcagttcttcgcacaacaaaatcagaaaccaccataagcaaaacaaacgattga  20109400                                                                                                -----                                                                                        <---------ARR14(2)      ----------->GT1                                                                   --------->ARR14(2)     <---------------------WRI1                                                   ------>ZmHOX2a(2)  <---------TOE2(3)    ----------------->AGL2          --------->ARR11(3)         =================== -------->MYB52(1)   ------->TEIL                      <---------ARR11(3)       <---------ARR14(2) --------->DOF2   <---------ATHB12             <---------ZAT6 <<<<<<<<<TBF1     --------->ARR14(2)   agtaaaggaagaaaatttcaatgaacccagaagtagatagagatacctagtgagaaacatcttcttcttctcttccgatttcgatctgcaaaacctctta  20109500                                          ------>ZmHOX2a(2)                                         --------->At4g35610                                         <---------At4g35610                  --------->YAB1         <------ZmHOX2a(2)             ------->GAMYB              <-----------ARR10            --------->ANAC58            --------->ARR14(2)          --------->MYB52(1)            <---------ARR14(2)                      --------->YAB1       --------->ANAC46                 --------->GLK1(2)              --------->YAB1   ------>ZmHOX2a(1)                    ------->TEIL        <-------TEIL     <---------ICU4 ----->DOF2 --------->ANAC58            <---------AGP1     --------->GLK1(2) --------->YAB1 =========HOX2a_HOX2a              --------->MYB52(1) --------->LBD16 --------->AHL20(2)------->TEIL   aagtccttcgcacaacggaatcaaaaccctagaaaaacaacggatctgagttaatccagagattcagagaaaataaaaatcatcacaatgaacttgttga  20109600                               --------->ARR14(2)                                  *TSS                               --------->GLK1(2)                                 ------->TEIL                               <---------ARR14(2)                             --------->ANAC58                         ------>ZmHOX2a(2)                                    --------->ANAC58                        <---------At4g35610                              ---------->DOF2 <---------HSFB2a(2)               <---------At4g35610                               <-----------GT1<---------ALFIN1               --------->At4g35610                 <----------DOF2   <----------DOF2     --------->HSFB2a(2) <---------ZAT14    <---------WOX13(1) <---------KAN4(2)     <----------DOF2 --------------->AtSPL3   gagtatagaatcaaaccagctaattgatctgcgaatcggagaataaacagaagcttttgctctctttttagctttcaaagacgcacttcttcttgaagaa  20109700                                                                               --------->MYB59                               <---------YAB1                                <---------ATHB12                             --------->YAB1                              ------------>CBF                           <-----------TBP                              <-----------------AGL1                 --------->ANAC58                                       --------->ANAC58                 --------->ANAC58                              ----------->RAV1(2)  <----------DOF2                 --------->ANAC46                <---------MYB59    <-----------HVH21     <------------CBF<------NtERF2     <----------DOF2   --------->YAB1 --------->ANAC58<----------DOF2   caagttagattgtttctaaacgcagcgttttttataatgggctttcatgggcctaactatattaagcctgggtcacccaattaggcctttctttgtattt  20109800               --------->At4g35610               <---------At4g35610                                                  ---------->DOF2        <---------YAB1                                                    ----------->GT1          --      --------->YAB1                                         <-----------HVH21     --------->AHL20(2)      <---------ICU4                                   --------->TOE2(3)<---------ANAC55(1) <--------     --------->ICU4      ----------->HVH21         <---------AHL20(2)   <---------ANAC46  ---------->DOF2   ttgaaaaattatgagacagctatagaactgactggaatttgaacatgttccaatttatctcaatgtcagaagttaagtgtaacaataaaagaaaaagaca  20109900                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                            --------------->AtSPL8                                          <--------                          <-----------GT1                                                  ----------                      <---------AHL20(2)                   <---------ICU4                 --------->DAG2                    <---------YAB1                        <---------AHL20(2)              <----------                   <---------AHL20(2)  --------->AHL20(2) --------->ICU4                  -----------                   <---------AHL20(1)  <---------AHL20(2) <---------ATHB51               ---------->DOF2                 <---------YAB1 <---------ZAT14           --------->AHL20(2)       --------->MYB52(1) ------->DAG2    --------->ICU4 <---------ZAT18     <---------HSFB2a(2)            ------>MYB46(1) -- --ID1    <-----------RAV1(2)   --------->ZAT14     --------->HSFB2a(2)            ------>MYB83    <-   aaaattggcagtccaggttattatttttttgctgtacacaaataaatgttttttttagaaataattagttttagtgaataaaaccaaacagaaaagtaca  20110000 --------->ATHB51 <---------ICU4 -------->HAHB4 --------->ATHB12 <--------ATHB1 -------->AHL20(2) ---------AHL20(2) ---------YAB1                                             <---------ANAC58 ---------ATHB51                                           <---------ANAC58          ---------->DOF2 -------->ICU4                                      <---------ANAC46             --------->ANAC58 --ID1                                              <---------ANAC58             --------->ANAC58 ->GT1---------->DOF2   ---------->DOF2             <---------ANAC58             --------->ANAC46 -----AtSPL8        ----------->GT1              ----------->HVH21               --------->RAP2.6(2) ---->AtSPL8--------->ALFIN1                    <-----------HVH21            --------->HSFB2a(2) ------->AHL20(2)   <---------ANAC46        --------->GLK1(2)             ------>ZmHOX2a(1)    <----- --------AHL20(1)   <---------ANAC55(2)   ---------->DOF2  <---------ANAC46  <---------HSFB2a(2)   aaataattgaaagagtgttgtctcgtaaaagtatgggaacgatgaaaagctgtgacttgttgcgagacttcttctccttccagacgcaaaagtttgtctt  20110100                                                                                              <------                                                                                            <--------                                  --------->YAB1                                           <---------                               <---------AtLEC2                    <----------ID1          ==========                               <---------ANAC58               ---------->DOF2              --------->AHL20(1)                               <---------ANAC58         <---------MYB52(1)                 <---------AHL20(1)                          <----------DOF2             <---------ANAC58                    <---------AHL20(2) -----DOF2                <---------DAG2              <---------ANAC58               ------>ZmHOX2a(1)   tggtcagtctctcttatttctctaaacacttttgcatgataacaactattcgaatttcgttactaaaagacaacaagaacaaaactccttatatatatta  20110200  Previous    Next  AGI:  At1g53850.1    Description:  PAE1 (20S proteasome alpha subunit E1); peptidase. Identical to Proteasome subunit alpha type-5-A (PAE1) [Arabidopsis Thaliana] (GB:O81149;GB:Q56ZL5); similar to PAE2 (20S proteasome alpha subunit E2), peptidase [Arabidopsis thaliana] (TAIR:AT3G14290.1); similar to Proteasome subunit alpha type-5 (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) (GB:Q9M4T8); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 20107621    to: 20109683    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version