Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ====================bZIP_DOF                 <-------MYC3                                             <---------ANAC55(2)                       ----------->RAV1(1)                                             --------->O2                              <---------ALFIN1                                             <---------TGA1a                         ------>NtERF2                                             ===============================bZIP_DOF--------->ANAC58                                             <---------O2---------->DOF2            --------->ANAC58              --------->LBD16            <-----------HVH21   ----------------->AGL2 <---------bZIP60(1)             <---------LBD16     <------MYB83--------->ANAC55(2)                    --------->bZIP60(1)     <---------YAB1              <------MYB46(1)    <------NtERF2---------->DOF2    --------->ANAC46     <---------TOE2(3)          <---------AtMYB61 --------->ETT(1)                 --------->SPL7   - ------->AHL20(2)       --------->YAB1<---------ANAC46<----------DOF2         --------->CCA1(2)     - ---->YAB1  <---------LBD16  <-----------RAV1(1) --------->RAP2.6(3)       <---------ZAT6 ------->MYC3   ataaattaagataaaccgggaatcaaacacaatgttggtgttgtgtcacttgtcggcattaaagccctaaagagatagagatagggacgccacatgttag  20104700              --------->AHL20(2)              <---------AHL20(2)     <-------MYC3     <-------MYC2                     <----------DOF2     ------->MYC2            --------->ARR11(3)           --------->ETT(2)     ------->MYC3            <---------ARR11(3)   <---------AHL20(2)   ------->TEIL             --------->YAB1        --------->AHL20(2) -------->ANAC58           <---------TOE2(3)   <----------DOF2 -------->ANAC58   <---------ICU4    <XXXXXXXXXXXXXXXXXXXXMIR157A-C                                 <   agacgcacatggccattttaatatttgctaagataatgttctttgttttcttttaatttgtagacattttcatgtgtttttttttggttctctccaatgt  20104800                                           --------->KAN4(2)                                          <---------HSFC1(2)                                          --------->HSFC1(2)                                          --------->KAN4(1)   -------->P                                          <---------KAN4(1) <---------MYB59                                    ---------->DOF2         <---------MYB111(1)            --------->YAB1                                 ----------->GT1 <----------DOF2 <---------LBD16           --------->ANAC46  <---------ANAC58   <---------ARR14(2)   --------->HSFB2a(1) ------>MYB46(1)              --------->ANAC55(2)  <---------ANAC58   --------->ARR14(2)   <---------HSFB2a(1) ------>MYB83      <----------DOF2   <-- ---------YAB1      <------ZmHOX2a(1)    <---------KAN4(2)------->TEIL<---------REM1(1)   <-------TEIL   gtatgcttgaaaaatataccgaggaacccatagaattgtaaagaatgttcgctttctatggacctactacggatgtagacgactttgacatatacataat  20104900                                                                                                 ----                                                                        <---------YAB1         ------                                                              --------->YAB1                  <------ZmHOX2a(2)                                                              <-----------GT1                --------                                                           <---------ICU4                    --------                                                           --------->YAB1--------->YAB1      --------                                                          --------->AHL20(2)           --------->AtLEC2                                                          --------->ICU4--------->ICU4 --------->ANAC58                                   --------->AHL20(1)     <---------ATHB51             --------->ANAC58                                   <---------AHL20(1)     <---------AHL20(2)           --------->ANAC46                          ------>MYB46(1)                <---------AHL20(1)   ------->TEIL   <-------                          ------>MYB83            --------->WOX13(1) --------->DOF5.7(2)     <-------               ---------->ID1<-----------GT1    <---------WOX13(1)  --------->TOE2(3) ------->MYC3 <-   <-----------GT1   <-----------GT1<---------AHL20(2)   --------->AHL20(2)<---------YAB1    <------- -------ANAC55(2)<----------DOF2   --------->AHL20(2)--------->YAB1 --------->TOE1(3) <-------MYC3<--   acataaaaccattttttgtctttaaaccaaattacaatataatcaagttgattaatcaaaataattacaacgttatcatgaatcttcacatgcaagatcc  20105000   --------->ANAC58   --------->ANAC58   <---------ALFIN1 -->ZmHOX2a(1) >ZmHOX2a(2)                                        <---------ICU4 ->ARR14(2)                              <-----------HVH21 ->ARR11(3)                             --------->ANAC58                              --------->ANAC58 ->ARR14(3)                             --------->ANAC58                       ---------->DOF2 --ARR14(3)                             --------->bZIP60(2)                <---------------AGL15 --ARR11(3)  --------->ANAC46--------->ALFIN1      <---------YAB1          --------------->AGL15 --------ALFIN1          <---------At5g28300     --------->YAB1           <-----------------AGL1 --ARR14(2)  <----------ID1 --------->LBD16     <-------TEIL    --------->ANAC55(2)   --------->ANAC58 -------REM1(2)        ----------->HVH21--------->ANAC46      <---------AHL20(2) --------->DAG2   tacacacacacttagacgacaagaagtcaccgtggaacaagcgcgtcacgttcatcattcacatttacttaatcccacttaaaaaggcaaacaacaacat  20105100                                                   <---------ICU4                                                   --------->YAB1                                                  --------->ICU4               ----------->RAV1(1)        --------->YAB1                           <----------DOF2               --------->MYB52(1)         --------->TOE2(3)                       <---------ANAC58             *TSS ------->GAMYB          <<<<<<<<<ARR1                 --------->DAG2           -----         --------->TOE2(3)               <<<<<<<<<ARR2                ---------->DOF2      <------ZmHOX2a(1)        --------->YAB1               <---------ATHB12      ---------->DOF2    <----------DOF2  <-----   --------->HSFB2a(2)      ---------->DOF2     --------->YAB1  ----------->GT1   <---------ANAC58   gtcttctctaacataaacaacagaacataacaaagcccaaacaatcttagtaataatcccaaaaaccagaaaaaaaggagctttgcttttgtaggaatta  20105200                               --------->DAG2                        --------->CCA1(2)                      <------ZmHOX2a(1)          --------->GLK1(1)   ---------->DOF2    <---------ARR11(3)        <---------ZAT14--------->ARR11(3)        --------->ARR11(3)        <---------ZAT18<---------ARR14(2) --------->At4g35610           --------->ANAC58        --------->ZAT14--------->ARR14(2) <---------At4g35610           --------->ANAC58 ---->MYB52(1)    ---------->DOF2        ------->TEIL              <----------ID1 ----AHL20(2)  ------>ZmHOX2a(1)      --------->ANAC46           ---------->DOF2   atggattcagtgaactccttcaaaggatatggaaaagtagacgaagctcaagatttagcattgaagaaaaagacaagaaaacgtctacttctactatcca  20105300                                 <------NtERF2--------->DEAR3(1)                                 --------->RAP2.3(1)                                --------->ABI4(1)                                <---------ATERF1(1)                                ------>NtERF2<------NtERF2                               --------->ANAC46<-----------HVH21                               <---------DEAR3(1)                               --------->DEAR3(1)                               --------->RAP2.3(2)                               --------->RRTF1(3)                              --------->ORA47(2)                              --------->DEAR4(2)                              --------->ATERF1(1)                              --------->ERF1 --------->MYB46(3)                              --------->RAP2.3(1)                         <---------ICU4      --------->DEAR3(2)                          ------>MYB83                         --------->YAB1     ------>NtERF2                                ------>MYB46(1)                         --------->ATHB51  --------->DEAR3(1)                          <---------ALFIN1                         -------->HAHB4    <---------ALFIN1                            --------->DEAR3(1)                        --------->ICU4    <------NtERF2                                --------->AtMYB61                      --------->YAB1      --------->ATERF1(1)                         --------->ANAC46                    --------->LBD16      <---------ATERF1(1)                        <---------ALFIN1                --------->DEAR3(1)--------->DEAR3(1)                               --------->ZAT18 --            <---------YAB1   <---------ATERF1(1)                                   <---------ZAT18 <-     --------------------->WRI1--------->RAP2.3(3)                         <---------ALFIN1 ---------  --------->LBD16   --------->At5g28300 --------->ANAC46                <---------WRKY38(1)--------->LBD16   tctccgtcgtagttctcatcgccgtaataatcgccgccgtagtcgccaccgtcgttcacaagaacaaaaacgagtcaacaccgagtccacctcccgagtt  20105400                  --------->ANAC58                  --------->ANAC58          --------->ZAT14                                                                          --          <---------ZAT14                                                                       <----          <---------ZAT18                                                                      <-----        --------->ANAC46                                                                       ------      <---------ALFIN1                                                                         ------    ------>MYB46(1)                                                     <---------HSFC1(2)--------->MYB52(1)    ------>MYB83  --------->ANAC46              ------->TEIL            --------->HSFB2a(1)    ------  --------->AtMYB61                            <---------CCA1(2)        --------->HSFC1(2)----------- ------->ZAT6--------->ANAC46 <---------ZAT6   <---------GLK1(2)     ---------->DOF2     --------->ANAC46 ----------GT1  ---------->DOF2            <---------LBD16      <---------ARR11(3)     --------->ANAC46 >LBD16 --------->bZIP60(2) <---------ANAC46--------->LBD16     --------->ARR11(3)   ----------->RAV1(1)   aacaccatccacttcactcaaagccatttgcagtgtaactcgtttccctgaatcttgcatttcaagtatctcaaagcttccatcttccaacacaacagat  20105500                                                                      --------->ANAC58    --------->GLK1(2)                                                 --------->GLK1(2) ------->LBD16                  <---------ICU4                   --------->LBD16 --ZmHOX2a(2)                  <---------ATHB12                <---------LBD16 ----ARR14(2)                  --------->ICU4                 --------->MYB52(1) --->AGP1                      <---------YAB1                 <---------At5g28300 --->ARR14(2)           ---------->DOF2                    <----------DOF2                  --------- --->ARR11(3)     <---------YAB1--------->YAB1      <---------GLK1(1) --------->ANAC58      --------- >RAV1(1)      <---------ARR11(3)            --------->ATHB12<-----------GT1  ---------->DOF2   ccagagactctattcaagctctcattgaaagtaatcatcgatgagcttgattcgatttccgatttaccggagaagctatcgaaagagactgaagacgaaa  20105600  Previous    Next  AGI:  At1g53840.1    Description:  ATPME1 (Arabidopsis thaliana pectin methylesterase 1); pectinesterase. Identical to Pectinesterase-1 precursor (PME1) [Arabidopsis Thaliana] (GB:Q43867); similar to ATPMEPCRC, pectinesterase [Arabidopsis thaliana] (TAIR:AT3G14300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45545.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 20105113    to: 20107335    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version