Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------At4g35610                  --------->At4g35610                  <---------ZAT2              <------NtERF2            <---------DEAR3(1)           --------->HSFB2a(2)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)                                                            <---------ARR14(2)     <---------ARR14(2)                                                            --------->ARR14(2)     --------->AGP1                                                                --------->ARR11(3)     --------->ARR11(3)                                                           <------ZmHOX2a(1)     <---------ARR14(3)                              <---------ZAT14            <---------TOE2(3)     --------->ARR14(3)                              --------->REM1(2)         --------->YAB1     <---------AGP1                                  --------->ZAT14          --------->ICU4     --------->ARR14(2)                           <---------ANAC58         <------ZmHOX2a(1)     <---------ARR11(3)                 <----------DOF2                  <---------TOE1(3)     <-----------ARR10   --------->ATHB12         <---------ANAC46       <---------TOE2(3)    <---------CCA1(2)  <---------WOX13(1)   <----------DOF2         ------>ZmHOX2a(1) -----YAB1 <---------HSFB2a(2) <----------DOF2    <---------ANAC58<---------At4g35610        <-------   gattgcagatcttctcggcgagctcattgatttctttctctactttctttatgcgtgcagagtaaggctcctgctaaggaatgaggattttgaagcttta  20079900                                           <-------MYC3                                           ------->MYC3                                           <-------PIF5                                           <-------MYC2                                           ------->PIF5                                           ------->MYC2                                           <-------MYC4     ------>ZmHOX2a(1)                                          <---------HSFB2a(1)                                 <---------ANAC55(2)       --------->TOE2(3)                               --------->CCA1(2)    --------->ANAC55(2)                              <---------ARR14(2)    <---------ANAC55(2)                         -----                              <---------ARR11(3)    --------->ANAC58                            <----       <---------ICU4         --------->ARR14(2)    --------->ANAC58                         ------>NtERF2    --------->YAB1         --------------->AGL15 --------->ARR14(2)                        <---------ANAC58   <---------YAB1         ----------------->AGL1 <---------ARR14(2)                <----------DOF2--- ---DOF2            <----------DOF2 ---------->DOF2 --------->ANAC46   --------->TOE2(3)   <---------ANAC58   gaagtatgattatgccattcttctttctgccagatatgtaaagcacgttcgaatacgcattcctcaatgttcacctcaaaatgtgcttcacttgcctccg  20080000                                                                           <---------ANAC55(2)                                                                       <-----------HVH21                                                                    ----------->RAV1(2)         -----                                                                    --------->At4g35610      <-------                                                                    --------->O2             --------                                                                    <---------TGA1a          <-------                                                                    <---------O2           <------NtERF2                                                                    --------->ANAC55(2)    --------->ATERF1(1)                                                                    <---------ANAC55(2)  <---------DEAR3(1)                                                                    <---------At4g35610  --------->ALFIN1                                                                  <-----------GT1       <------NtERF2                                                                <-----------HVH21       --------->ATERF1(1)                                                               <---------bZIP60(1)     <---------ATERF1(1)                                                               --------->bZIP60(1)    <---------DEAR3(1)                                                               --------->TGA2(1)    --------->LBD16 ---->ZAT14                                        --------->YAB1----------->HVH21 --------->LBD16 -----SPL7            --------->DAG2        <---------ZAT14    <---------TGA2(1)  <---------LBD16 ------>SPL7         ---------->DOF2        --------->ZAT14  --------->YAB1--------->ANAC55(2)  -----   tactcccaaactctgtaatgtcagaaagcgcttcttcacttgcctctgtactatcaaactctatgatgtcacctgtctcgtaatcccggaggcggagcac  20080100                                                           --------->YAB1    --------->MYB46(3)                               --------->ANAC58  --------->AtMYB61                                  --------->ANAC58 ---->ANAC58                                       <------ZmHOX2a(1) --ZAT18                                         <---------TOE2(3) ->ZAT14   ------->MYC3                          --------->ANAC58<---------ICU4        <-------TEIL --ZAT14   <-------MYC3                          --------->ANAC58--------->YAB1     ----------->GT1-- ---->ANAC58                              <---------LBD16 <---------ATHB12<---------YAB1           --   tctaccacaaccatatgccaaaaaactgagaactgagtttctcatacggataaggaagcaatgaaaattatcacttacgataagagaggttcaaagtctg  20080200             --------->PCF2             <---------PCF5             --------->PCF5             <---------ATERF1(1)             <---------PCF2             <---------ARR11(3)             <---------TCP15(1)         --------->ARR11(3)             --------->ATERF1(1)       --------->CCA1(1)             --------->ZAT18 <------ZmHOX2a(2)             <---------ZAT18--------->ARR14(2)             ------>NtERF2  <---------ARR14(2)            <-----------TCP11(1)     --------->YAB1            ------>NtERF2   <---------ARR11(3)        --------->At4g35610           --------->ATERF1(1)  ------>ZmHOX2a(1)     =================RAV           <---------PCF2   <---------ARR14(3)        ----------->RAV1(2)           <---------RAP2.3(3)------>ZmHOX2a(2)       <---------At4g35610        --------->ALFIN1    --------->ARR14(3)    --------->ARR11(3)         <---------YAB1        <---------ANAC46    --------->ARR11(3)    <---------ARR11(3)       <---------ICU4      <-----------RAV1(1)  <------ZmHOX2a(1)     --------->YAB1 ---------->DOF2           --------->YAB1 ------->ANAC58          <---------TOE1(2)      <---------YAB1------->GAMYB--------->YAB1<---------YAB1 ------->ANAC58         <---------LBD16--------->RVE1(1)   ----------->RAV1(1)--------->ATHB12 ------   aacgcatattgtgggggccctcattctcaggatcctccataatatctcttatgatcatctgcaacagaaagcattaaacatgatttgatttatcatcaaa  20080300                                                                                                 ----                                                                                                <----                                                                                      --------->LBD16                                                        <------NtERF2                --------->HSFB2a(2)                                <------------CBF <---------ARR14(2)                  --------->HSFC1(1)                              <---------AHL20(2) <------------CBF                    <---------HSFC1(1)                              --------->AHL20(2) --------->ARR14(2)                  <---------HSFB2a(2)                        --------->HSFB2a(2)     <------ZmHOX2a(1)         <------NtERF2   ----------- ---->DOF2         <---------ICU4               --------->ATHB12    --------->ATERF1(1) ---------->DOF2   agagagcaactacatcggtgatacttacagaattaattgcaacttcaacaggattggcagccatttcggcgaaggcctcgtttagttccagaaagtcaaa  20080400                                            ----------->HVH21                                        --------->At4g35610                                 <---------AtLEC2                                 <---------ANAC58                                 ----------->GT1                                 <---------ANAC46                           --------->HSFC1(2)                             <-------GAMYB <-----------HVH21                <---------HSFB2a(1)                             <---------ANAC58                               --------->HSFB2a(1)     <                      ------>ZmHOX2a(1) ----------->RAV1(2)                 <---------HSFC1(2)      -                  <---------ARR14(2)    <---------At4g35610           <---------ANAC46            <-- ----->GLK1(2)    --------->ARR14(2)<-----------HVH21              <---------MYB52(1)             <-- -----GLK1(2)  ------------>CBF  <---------ANAC58               ----------------->AGL1   <---------YAB1 >GT1      <---------CCA1(2) <---------ANAC58                  <-----------------AGL1  --------->YAB1   ttctgcatcccttatatcccaatcctctctgggttgcatgtcatctgtgacctcgaccttcggttttcccttgggggaagcgtctggtatcatcttagcc  20080500                                                        <----------DOF2                                                        <---------------AGL15                                                        --------------->AGL15                                                       <-----------------AGL3                                                       <-----------------AGL2                                                     <---------ARR11(3)                                                     --------->ARR11(3)                                                    --------->GLK1(1)                                                    <---------GLK1(1)         <------ZmHOX2a(2)                          <---------CCA1(2)        --------->ARR11(3)                       ------>ZmHOX2a(1)        <---------ARR11(3)                   --------->ARR14(2)  <---------ANAC46    ------>ZmHOX2a(2)      <---------ARR14(2)  --------->ALFIN1    ==================================HOX2a_HOX2a                      <----------DOF2 ---------MYB46(3)  ------->TEIL            <---------CCA1(2)                          <---------HSFC1(2) -------->ALFIN1    <---------AGP1        <---------ANAC46     <------MYB83            --------->HSFC1(2) -------ZAT2        <---------ARR14(2)    <---------ANAC58     <------MYB46(1)     ------->GAMYB -----GAMYB         --------->ARR14(2)    <---------ANAC58<---------AHL20(2)    ----------->RAV1(1)   agttgtgggggatcatcaaatggatctgtaagtatatatgtgtgtcgtatcctgatatctttatttggtctgttcttcgcatcaacagaagctttggcta  20080600                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               ------                                              --------->DAG2                                   <-----                                             ---------->DOF2                                 --------     ---------->DOF2                   ----------->RAV1(2)                                 <---------YAB1 --------->ANAC58                      --------->At4g35610                ---------->DOF2 --------->TOE2(3) --------->ANAC46                    <---------ALFIN1            --------->ANAC46       <---------YAB1 --------->ANAC58               --------->HSFB2a(2)      --------->AHL20(2)           <---------CCA1(2)   tacaagtcaaagtttcaaacccgctggtaatcttcccaaacacctgaaaaagaggcatattatatacacataaaaaaaaagaataggcatatcattaata  20080700    <---------ANAC58    <---------ANAC58 ---->ATHB12 -----ICU4 ---->ATHB51 --->HAHB4 ----ATHB1                           <------ZmHOX2a(2)                                              < ----YAB1                           <---------ARR11(3)                                       -------- ----ATHB51              --------->ANAC58                                                    -------- --->ICU4                --------->ANAC58       ----------->GT1                              -------- ----AHL20(2)         <---------ATHB12      ---------->DOF2                        <---------At4g35610 ->YAB1        <---------GLK1(1)    --------->ARR11(3)          ---------->DOF2    --------->At4g35610   attggtgcttacagtgtatttcccatcaagacagtctagatcatcacaaagtgtgatataaaactgaaaagaaaacagacaaatcagatgaagacatgca  20080800  Previous    Next  AGI:  At1g53780.1    Description:  26S proteasome AAA-ATPase subunit, putative. similar to RPT1A (regulatory particle triple-A 1A), ATPase [Arabidopsis thaliana] (TAIR:AT1G53750.1); similar to 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) (GB:Q41365); similar to hypothetical protein OsJ_019595 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36112.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45534.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro Range:  from: 20077664    to: 20080258    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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