Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------AHL20(2)                                 --------->LBD16                                --------->HSFB2a(2)                                --------->HSFC1(1)                                <---------HSFC1(1)      --------->WOX13(1)                      ------->GAMYB           --------->AHL20(2)      <---------AHL20(2) -------ANAC58     --------->MYB52(1)         --------->AHL20(1)      --------->AHL20(2)    xxxxxxxxx -------ANAC46     ----------->RAV1(1)   <---------AHL20(2)          --------->AHL20(2)     xxxxxxxxx -------ANAC58   --------->MYB46(3)      --------->AHL20(2)      <---------YAB1     --------->ATHB12 ----MYB52(1)   --------->AtLEC2<---------HSFB2a(2)  <-----------GT1 <---------AHL20(2)   <---------TOE2(3)   gcttcttctcttctctccatccaacagaaaatttccagaaaatttaaattttttatatcaatccattctaatttaaaaacatctattgatttaagaaaac  20036600                       --------->ANAC58            --------------->AGL15            <---------------AGL15           <-----------------AGL1           <-----------------AGL2           ========================================================================MADS_MADS           ----------------->AGL2      <---------AHL20(2)           ----------------->AGL3   <---------ICU4           <-----------------AGL3  --------->AHL20(2)        --------->ARR11(3)         --------->ICU4                        <---------HSFB2a(2)    <----        <---------ARR11(3)         <---------ATHB51                <---------------AGL15    <--------      ----------->ARR10--------->ANAC58--------->AHL20(2)          --------------->AGL15  --------->YAB1 xxxxxxxxxxxxxx>smallRNA(se3)      <---------AHL20(2)   --------->At4g35610  <---------GLK1(1)  ----- xxxxxxxxxxxx>smallRNA(si3)      --------->YAB1      <---------ATHB12    --------->HSFB2a(2)---------   taaaccctaagatactatatatggaacccaaacaaaaataattaaactaaatgaaatcatctcaagtttcagtttttagaaatctgacaaaatcatgttt  20036700                                                                                         --------->ARR11(3)                                                                                     <---------AHL20(2)                                                                           --------->ARR14(2)                                                                           --------->ARR11(3)                                                                           <---------GLK1(2)                                                                           <---------ARR11(3)                                                                           <---------ARR14(2)                                                                          <------ZmHOX2a(1)<---------   <----------DOF2         ---------->DOF2                              <---------TOE1(3)--------->AHL20(1) -------TBP          <----------DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ------------>CBF -YAB1       <----------DOF2--------->DAG2                              <---------TOE2(3)<---------AHL20(1) ---->AHL20(2)   <-----------GT1  <------------CBF                 <---------ZAT6   --------->AHL20(2) >ICU4 <-----------GT1    ------>ZmHOX2a(1)                --------->AHL20(2) <-----------GT1   atatacttttaatctcttttctcctttcctaaagcgaattgaaatcgattcgattttgggtttaaatttgtgttaaggattttcaattttatatattgat  20036800                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    --------->AGP1                    <---------AGP1                    <---------ARR14(2)                    --------->ARR11(3)                    <---------ARR11(3)                    --------->ARR14(2)                    <---------ARR14(3)                                                 ----------->GT1                    --------->ARR14(3)                                               ---------->DOF2                 --------->YAB1                                                   xxxxxxxxxxxxxxxxxxx            ------------>CBF                                                     xxxxxxxxxxxxxxxxxxxx        <---------ARR11(3)                                                       <------------CBF        --------->AHL20(1)                                               ----------->GT1        <---------AHL20(1)                                              --------------->AtSPL8   ----------->GT1----------->ARR10         <---------AHL20(2)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) ---CBF --------->ARR11(3)         <------------------------ANAC81      <---------------AtSPL8   caaaccagaaaatattcaataagatcttgtgagtcttcgttttcattttttttttgttctaactagcaaatagaatggtacaaaattgaaagtaaaatag  20036900                    <---------AHL20(2)                                                              x            --------->ARR14(2)                                                                      x            <---------ARR14(2) <---------TOE2(3)                                                  <--          <------MYB46(1)     ---------->DOF2                          <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)          <------MYB83    <---------TOE2(3)                           --------->ANAC46            <--         --------->MYB59<---------AHL20(2)                            --------->ANAC58      ---------         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        --------->ANAC58    ----------- xxxx>smallRNA(l2)  --------->AHL20(2)    ---------->DOF2    ----------->GT1         <------ZmHOX2a(1) xxxx>smallRNA(l2)  <---------YAB1 ----------->GT1   <-----------------------TaNAC69(2) xxxxxxxxxxxxx   aaaactatagttcggttctgttttaattaagttaaagtagaaaaaaaagatgagaggcgagagaggtgaaacaagcaatggaagagaggaagaagtgatt  20037000                                                                                     --------->YAB1                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <--------ATHB1                                                                                  <---------ICU4                                                                                 <---------ATHB12                                                                                 --------->ICU4                                                                                 <---------ATHB51                                                                            ------>NtERF2                                                                            --------->RAP2.6(2)                                                                           <---------ATERF1(2)                                                                          --------->RAP2.3(1)                                                                          ------>NtERF2                                                                          --------->ATERF1(1)                                                                         <---------RRTF1(1)          <---------ANAC58                                               <---------ATERF1(1)          <---------ANAC46                                               <---------RAP2.3(1)          <---------ANAC58                                               <---------ERF1        <---------MYB46(3)                                              <---------RAP2.6(2)       <---------AtMYB61                                                <---------ANAC58    <---------AtMYB61                                      <---------ANAC46<---------DEAR3(1)    --------->ALFIN1                                   <---------AtMYB61<---------RAP2.3(3)    <---------DEAR3(1)                                 --------->ALFIN1 <---------DEAR3(1)  <---------MYB46(3)  <---------AtMYB61        xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->YAB1 --------->ALFIN1     --------->MYB59          --------->MYB55(2)       <---------ANAC58 <---------AtMYB61   <--------P                <---------MYB46(3)       <---------ANAC46 <---------DEAR3(1)<---------ANAC46           <---------AtMYB61         <---------RAP2.3(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <------MYB46(1)<---------ANAC58<---------ANAC46         x xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------MYB46(3)          <---------RRTF1(3)   <------- -------TOE2(3)    <---------REM1(1)        <------MYB83<---------MYB46(3)<------NtERF2 xxxxxxxxxxxxx -------TOE1(3)  <---------ANAC46          <---------MYB46(3)           <---------RRTF1(2)--------->ICU4 >ICU4 --------->ALFIN1<------MYB83        <---------AtMYB61           <---------LBD16xxxxxxxxxxxxxxx >GT1<---------MYB46(3)<------MYB46(1)  <-----------RAV1(1)<---------ANAC58--------->ATERF1(2)      < xxxxxxxxxx>smallRNA(fl3)         --------->ICU4<-------GAMYB<---------ANAC46<------NtERF2<---------YAB1   aaggtggtggtggtgtgtatggtgtaggtcgtagtaatatttgtgttggtggttgcagtggtcgtgtgtcaattgcggcggcaataatggtgatgatggt  20037100                                                                                                    -                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                               xxxxxx                                                                                               xxxxxx                                                                                              xxxxxxx                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                            xxxxxxxxx                                                                                            xxxxxxxxx                                                                                           xxxxxxxxxx                                                                                           xxxxxxxxxx                                                                                           xxxxxxxxxx                                                                                           xxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                    <---------ANAC46-                                           --------->ALFIN1                         xxxxxxxxxxxxxxxxx                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   xxxxxxxxxxxxxxxxxx                                           <---------AtMYB61                       xxxxxxxxxxxxxxxxxx                                       <---------ZAT14                             xxxxxxxxxxxxxxxxxx                                       --------->ZAT14                           <---------AtMYB61 --                                   --------->ATHB12                            xxxxxxxxxxxxxxxxxxxxxx                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         xxxxxxxxxxxxxxxxxxxxxxx                               ----------->HVH21                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <--------P     ----------->TGA1                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              --------->YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     --------->ICU4    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  xxxxxxxxxx  ----------->HVH21          <---------MYB46(3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxx xxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------YAB1  <---------LBD16xxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------YAB1 <---------AtMYB61  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --YAB1--------->At4g35610  --------->ALFIN1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------MYB46(3) xxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------------AGL15<xxxxxxxxxxxxx xxxxxxxx>smallRNA(l2)   <-----------RAV1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------MYB46(3)< ---------At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ----------->HVH21 --------->ALFIN1<---   agagatgacagcgtaatggtagtttctatggtggtgacgattgcagtggtgatggtgatgatggtatgacatttgtggaaatagtggtggatgcaatgat  20037200              xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <-------GAMYB                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------->At5g28300                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ----------->GT1                          <---------MYB46(3)   <---------MYB46(3)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----------->AtMYB77               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->YAB1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -----YAB1    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---->ICU4  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxx>smallRNA(l2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxx>smallRNA(i2)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -->YAB1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---ICU4    --------->YAB1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --ATHB12 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ->ICU4   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxx>smallRNA(l2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ----------->MYB.PH3(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxx>smallRNA(si3)  <---------YAB1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------TOE2(3) xxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------ANAC46 --------->TGA1   <---------MYB46(3)  --------->CCA1(2)  <---------TOE1(3) x>smallRNA(si3) <---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         --------->YAB1 >smallRNA(si3)  --------->ICU4xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------AHL20(2) xxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <---------YAB1 xxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->AHL20(1) xxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <---------ARR11(3) xxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <----------DOF2    --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------ICU4 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   gatgacggttacaagggtaatggttgtaatagcatagaagagatggtgattgtatagttaagggtactttagtatatattatagtttatatacaaaatgt  20037300                 --------->MYB52(2)                                          --------->YAB1               <---------MYB52(1)                                         <---------ICU4               <--------P                                                --------->ICU4              <-------GAMYB                                            --------->YAB1             <------MYB83  <---------YAB1                            <---------TOE2(3)              -             <------MYB46(1)-------->HAHB4                      <----------DOF2                     <             --------->MYB55(2)                               --------------->AGL15              ----             <---------MYB46(3)                               <---------------AGL15  <---------AHL20(2)         <-----------RAV1(1)--------->YAB1                  <-----------GT1 <---------YAB1      -----  <---------MYB52(1)  --------->TOE2(3)  <---------MYB52(1)<-----------GT1--------->YAB1    ---------   ctctgttttttttgttggttagtttcttaattatagtttttttgttagtcaattttgcaaatttcccttttaagaataatgatatatataaaaaaaaaat  20037400         --------->ARR11(3)         <---------ARR11(3)        --------->YAB1       <---------YAB1     --------->YAB1     <---------ICU4                                                               ------->TEIL    --------->ICU4                                                              --------->ZAT14   --------->AHL20(1)                                                         --------->LBD16  --------->YAB1                      <---------WRKY38(1)               ----------->HVH21          <- -------->AHL20(2)                    <---------WRKY12          <---------ANAC46--------->REM1(2)  -- ---------AHL20(2)                   --------->WRKY18(1)        <---------ANAC55(2)  ----------->HVH21 ----->AHL20(2)          <---------AHL20(2)---------->DOF2      <---------ANAC55(1)  --------->ANAC46 ---->AHL20(2)         <----------DOF2<---------WRKY45          --------->ANAC55(2) --------->MYB46(3) >AHL20(2)  <---------YAB1     <-----------GT1             --------->YAB1    <---------ANAC46 <------   aaaaaaataatgatattatactgggctttaattttactggtcaacaaaagcccatagtctctcattatgtgtttatgacccgtgtacccgacccatcttt  20037500  Previous    Next  AGI:  At1g53660.1    Description:  phosphate translocator-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT3G14410.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71953.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 20036950    to: 20039614    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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