Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <------MYB46(1)                        <------MYB83                        ----------->GT1                      <---------MYB52(1)                --------->At4g35610                <---------At4g35610                --------->ZAT2           --------->ARR14(2)           <---------ARR14(2)       ---------->DOF2    ---------->DOF2<-----------RAV1(2)            <----------DOF2 --------->AtLEC2    <----------DOF2 -->ZmHOX2a(2)  <---------ZAT2 ---------->DOF2    --------->TOE2(3)              <-------TEIL   ccaaactaaagtgaatccagctcagttggtttataaagaaaagaagaggcaactttagtatcaagctcatgcatagtctcagtttcatctttagtaaacc  19989300                                                                                                    -                                                                                                    -                                                                                                   <-                                                                        --------->ANAC46           --                   --------->WRKY12                                    --------->LBD16             --            ---------->DOF2                                           <-----------RAV1(2)          <-          --------->YAB1                                           --------->GLK1(2)           ------   <---------ARR11(3)                                           <---------YAB1              <--------   --------->ARR14(2)                                       --------->ARR11(3)           <---------ARR11(3)   --------->ARR11(3)                      <-----------GT1  <---------ARR11(3)           --------->ARR11(3)   <---------ARR14(2)        <---------REM1(1)<----------DOF2<------ZmHOX2a(2)       ---------->DOF2-   atggagatactatcaaaagggttgacgaaagatgaagcaaaatataaacttttcatttcgaagatcaagattccaggctagctctaacaaaggtctttaa  19989400                                                                                          <---------RAP2.6(2)                                                                                          <---------DEAR3(1)                                                                                    --------->ALFIN1                                                                                  <---------ANAC46               -------->P                                                         <------MYB46(1)           --------->MYB52(2)                                                     <------MYB83           >>>>>>>>>>AtMYB44                                                     <---------AtMYB61           --------->MYB46(2)                                                <---------LBD16           --------->MYB59                                                   <---------HSFB2a(2)        ------------>MYB.PH3(2)                                             ------>ZmHOX2a(2) <-------TEIL <-----------GT1                                               <---------LBD16 <-------- -------->CCA1(2)                                                           ========================= -------->GLK1(2)                                             <---------ANAC58   --------->ALFIN1   - --------GLK1(2)                                              <---------ANAC58   <---------DEAR3(1) < ------->ARR11(1)                                        --------->GLK1(1)<---------ARR14(2)<-------- ------->ARR14(2) --------->ANAC58                   --------->ANAC58     --------->ARR14(2)--------- --------ARR14(2) --------->ANAC46                   --------->ANAC58   ----------->ARR10--------->RAP2.6(3) ---->DOF2 --------->MYB111(1)                      ------->TEIL--------->ICU4 <---------MYB52(1) <-- --DOF2<---------ZAT6--------->MYB52(1)            --------->MYB52(1)   ----------->HVH21--------->ATERF1(1) -------->ARR14(1)--------->ANAC58            --------->ICU4  <---------ANAC46--------->LBD16   <----   agattcggagagttagttaccagcaacggtttgatgttcttgaatgtattgatgaacggaaatgtcgtgatgaggtgatccgggaggtggagacggctga  19989500                                                                                   <---------REM1(1)                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                               --------->SPL7        --------->ATHB12                                                      <---------MYB52(1)       --------->WRKY38(1)                                                   <---------RAP2.6(3)       ----------->HVH21                       <---------ANAC46             <---------ANAC46     --------->At4g35610                    --------->ALFIN1                <---------ANAC58     <---------At4g35610                 <---------DEAR3(1)                 <---------ANAC58 -At4g35610                             <---------ORA47(1)                  <---------ANAC55(2) ====HOX2a_HOX2a                   --------->ARR14(2)                   <-------MYC2              --- -------->GLK1(1)                  <---------ARR14(2)                   <-------MYC3         <------- ---------GLK1(1)                 <------ZmHOX2a(1)                     ------->MYC3         -------- -ZAT2 --------->WRKY12         <---------TOE2(3)<------ZmHOX2a(1)      ------->MYC2         -------- >At4g35610                 <------ZmHOX2a(1)<---------MYB46(3)        <---------ANAC58      <------- ----ZmHOX2a(1)        <---------ANAC46<------ZmHOX2a(1)               <---------ANAC58 <------ZmHOX2a(1) -----TOE2(3)       ----------->HVH21 ----------->HVH21      <---------ALFIN1<---------SPL7 ---------   ggaattccgatgactggatgatgcgacggaggatgaggataggacggtggaggataagtagggacaccttgaaacgtgccgtaagatgaaggagaagctc  19989600                                                                                                    =                                                                                                    <                                                                                                    =                                                                                                    =                                                                                                    <                                                                                                    <        ---------->ID1                                                  --------->YAB1              - <------------------------ANAC81                                    <---------AHL20(2)              > --->ZmHOX2a(1)                                               <------------CBF                      - --HSFB2a(1)                                                 <---------ICU4         <---------MYB46(3) ->HSFC1(2)                                                  --------->ATHB51       --------->ALFIN1- ->HSFB2a(1)                                                 --------->ATHB12      --------->ALFIN1 < --HSFC1(2)     <----------DOF2                             --------->ICU4      <---------TOE2(3)   > -->ARR10 <----------DOF2 <---------ARR11(3)       *TSS     <---------YAB1      <---------TOE1(3)   >   ctctgtttttgtctttttctttgcccattatctctctctctatctctctgtctctctatctcattattgtttaatcagatttaaggttgtggcaaattag  19989700       --------->ZAT2       <---------At4g35610       <------NtERF2       --------->At4g35610       <---------ZAT2      ----------->RAV1(1)  --------->ALFIN1 ------->PIF5 <-------PIF5 ------->MYC2 <-------MYC3 ------->MYC3 <-------MYC2 <-------MYC4 ------->MYC4 -------->ABF1 ====================================MYC_MYB ---------O2 ===================================MYC_MYB ================================================bZIP_DOF ---------TGA1a ---------bZIP60(2)          <-------GAMYB                                                      <---- -------->TGA1a             --------->MYB111(2)                  <---------AHL20(2)           ------- >>>>>>>>>AtMYC2            --------->MYB55(2)               <---------ZAT6                  <------- -------->ANAC55(2)      <---------MYB46(3)                  ----------->GT1               --------->WOX13(1) -------->O2            --------->ALFIN1               <---------TOE2(3)                 <---------ATHB12 ---------ANAC55(2)     <---------AtMYB61          <---------GLK1(2)                   --------->WOX13(1) >>>>>>>>>HY5  <-------MYC3 <---------MYB46(3)   <---------TOE2(3)                    <-------TEIL >>>>>>>>>ABI5 ------->MYC3<--------P ---------->DOF2  <---------YAB1         ----------->HVH21 -----   acacgtggcagcagacacatggacgagtggttgttgttagaaaagctcatttagattatggtattgttaaattgaagtagttgacacatccatcaatcag  19989800                                         --------->HSFB2a(1)                                         <---------HSFB2a(1)                                         --------->HSFC1(2)                                         <---------HSFC1(2)                          <---------At5g28300                   --------->ANAC58     ------->TEIL                                                <    ------>MYB46(1)--------->ANAC46     <---------ARR14(2)                                         --    ------>MYB83   --------->ANAC55(1)  --------->ARR14(2)                                         <- -----At4g35610    --------->ANAC55(2)  <---------ARR11(1)      <-------TEIL                    <---- -->YAB1---------->DOF2 --------->ICU4  <-----------ARR10       <---------YAB1                 <----- --ATHB12          <---------ANAC55(2) <---------ARR14(1)   ------->MYC3               <---------GLK1(2) ---->At4g35610    --------->ANAC58    <---------CCA1(2)    <-------MYC3          <-----------GT1 ---   caaaccaaacaaaagttgaacacgcaattactgtcttcatcgaatcttcgtaacaaatcccacatgttcattgttcaatctaatttacacattcttctaa  19989900      --------->TOE2(3)   <---------CCA1(2)                                <---------LBD16 ------>ZmHOX2a(2)        --------->ICU4           <---------At5g28300 ------ZmHOX2a(2)  <---------ANAC58   <---------ANAC55(1) ------->ARR11(3)  <---------ANAC58   <---------ANAC58 --------ARR11(3) --------->STY1(2)   <---------ANAC58 -----TOE2(3)    ------>MYB46(1)      <---------ANAC46--------->LBD16                          <----- ------GT1       ------>MYB83         --------->ANAC55(2)                        <---------WOX13(1) ---->GAMYB <-----------GT1     ------->TEIL      <-----------GT1     --------->YAB1 <------ZmHOX2a(2)   cgatcttatcttattaacctagcttgacataatgaattttgcgtgttttgtattaccgcaaaacctttctagtcatgagcttgatagatcaatgtgtctt  19990000                         <---------ARR11(3)                         --------->ARR11(3)                     ---------->DOF2                ----------->GT1            --------->GLK1(2)                      <---------AHL20(2)          <-------MYC3         <---------GLK1(2)<------ZmHOX2a(2)<<<<<<<<<RAP2.2              <----------DOF2       <------ -----DOF2  --------->ARR11(3)            <---------TOE2(3)--------->ZAT6      ------->MYC3   <------   ttggcaatgtagattatctggtaaaaagatcaacaatagcattttagattgaattttttgaacagtacgagtgactttgcatatggactcactcttgcct  19990100                                              <---------ZAT2                         --------->ANAC58             <---------------AtSPL8       ------>ZmHOX2a(2)         <------ZmHOX2a(1)--------->ANAC58         --------->At5g28300              =================================HOX2a_HOX2a   --------->MYB52(1)   <-----------RAV1(2)        <---------REM1(1)                 --------->DEAR3(1) ---------->DOF2 ---ANAC58   --------------->AtSPL8   ----------->ARR10 --------->LBD16     <---------YAB1 ---ANAC58   --------------->AtSPL3<---------ZAT6     ----------->RAV1(2)   <---------TOE2(3)       -   atgactcaggctgtgaatgtacaaactcgtagttgtagagttgatccgagcttctaccctgaaacaccgaggaaaattaacatagtaaagcaaacagtgg  19990200  Previous    Next  AGI:  At1g53560.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17080.1); similar to unknown [Populus trichocarpa] (GB:ABK95219.1); contains domain PTHR10052 (PTHR10052); contains domain PTHR10052:SF2 (PTHR10052:SF2) Range:  from: 19988410    to: 19989651    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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