Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ANAC58         <-------TEIL                                   <-----------GT1    --------->ANAC58     <---------AHL20(2)                          --------->DAG2     --------->ARR11(3)           --------->AHL20(2) ----YAB1                ---------->DOF2     <-----------ARR10            <---------AHL20(2) ---AHL20(2)          --------->TOE2(3)      <---------ARR11(3)       <---------AHL20(2) -->AHL20(2)          --------->TOE1(3)     <---------CCA1(2)         --------->AHL20(2)   attagtataagacagtagttttgaccttaaagtgaattaacttaacatatcttaccaagaaaaactgatcaattttttaaattcatgtagatgagagtta  19986700              <----------DOF2             ------>ZmHOX2a(2)           <---------AGP1                                                      --------->TOE2(3)           --------->ARR11(3)                                                  --------->YAB1           <---------ARR14(2)                                                <---------YAB1           <---------ARR11(3)                                                <---------TOE2(3)           --------->ARR14(2)   --------->ANAC58                           <---------AHL20(2)          <---------CCA1(2)     --------->ANAC58                           --------->AHL20(2)   <<<<<<<<<<<<<<<<<LFY         --------->ANAC46                          --------->AHL20(2) <---------ANAC58          <----------ID1                     --------->ARR14(2) <---------ANAC58  <---------ZAT6                             <---------ARR14(2)                 ----   tttgcttacagtggatctttagtggtatgaagacaagacacattgaagacttcatgaagaaccatatactggtctaattaatattaatctggctattcaa  19986800                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                              xxxxxxx                                                                                           ----------                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                      --------->ZAT18                                                                                      <---------PCF2                                                                                    <---------ATERF1(1)                                                                                   --------->ALFIN1                                                                      <----------DOF2--------->ATERF1(1)  <---------YAB1            <-----------GT1              <---------AHL20(2)       <------ZmHOX2a(1) ------>DOF2       <------------CBF                      ------------>CBF--------->MYB59--------->ATERF1(1)   aaagatgaatgaattcatgtagattgtattttacatatgtgtttaaacaaatgtgatatttcaatgttcaaactttaggtctgaggaggggcctgcaatt  19986900             <------MYB46(1)             <------MYB83            --------->MYB111(1)            --------->MYB59       --------->ICU4    <---------ZAT6 ------AHL20(2) ----->AHL20(2) -----AHL20(1)                                                                          <---------ANAC58 ---->AHL20(2)          <---------MYB59                                                 <---------ANAC58 -----AHL20(2)  <---------ARR14(2)                                               ------------>CBF xxxxxxxxxxxxxxxx>smallRNA(si3)                                            <---------GLK1(2)        < -->CBF<---------YAB1 ------>NtERF2      <------------CBF        --------->CCA1(2)      --------->TOE2(3)   aatttagtgatgagtaggtatcggggcctaattaagcccaacttattgagcttggatgaagcatcagatataagacagagtcttccaattccttgatatg  19987000         <-----------GT1       <---------ICU4      <---------YAB1                                                                <---------ANAC55(2)    -------->ATHB1                                                                  --------->ANAC58    --------->YAB1                      --------->REM1(1)                   <---------YAB1    <---------ICU4                     ------>MYB83                    --------->YAB1    <---------At4g35610    <--------HAHB4                     ------>MYB46(1) --------->ARR11(3) <---------ICU4 --------->At4g35610    --------->ATHB51                  ----------->RAV1(1)         <---------AHL20(2)--------->ANAC58   --------->ICU4                   --------->MYB46(3) --------->GLK1(2)  --------->YAB1--------->ANAC58 ------ZmHOX2a(1)                ----------->HVH21     <---------ARR11(3)--------->ICU4 --------->ANAC58   taggaattattattccatacctcttgtttcagactgtgaccaacatcacagagccaaaatctagggttttaattcatcatgagaaaacgtaagcagcaag  19987100                                      <------ZmHOX2a(2)      <-------MYC3                                     <---------ARR11(3)      ------->MYC3                          <------ZmHOX2a(2)                  ------->MYC2                         <---------ARR14(2)         ---------->DOF2                       <----------                         --------->ARR14(2)   --------->ARR11(3)                         ------>ZmHOX2a(2)                   --------->ARR14(2)--------->ARR11(3)      <-------MYC2              --------->ARR11(3)                  <---------CCA1(2)  --------->ARR14(2)      --------->TOE1(2)       --------->WRKY12           --------->TOE1(3)     <-----------GT1 <---------HSFB2a(2)                <---------MYB52(1)           --------->TOE2(3)   <---------ATHB12  --------->HSFB2a(2)      ------>ZmHOX2a(2) <--------           <---------DAG2--------->AGP1------>ZmHOX2a(2)    <---------ANAC58 <---------GLK1(2)     --------->YAB1<---------ARR14(2)<---------ARR14(2)     <---------ANAC58 --------->ARR14(2)     --------->TOE2(3)   <---------ARR11(3)   <---------ARR11(3)    <----------DOF2<-------GAMYB<----   tttacaacgataaccttatcgtatccagatccaataaacgatcttcaacatctggaaaggaaacgtgctactttgatccgattcccgttgatctcgtcat  19987200   <---------ANAC58   <---------ANAC58 <---------ARR14(2) --------->ARR14(3) <---------AHL20(1) <---------ARR14(3) --------->ARR11(3)    <---------ANAC58      <---------ANAC58 <-----------ARR10     <---------ANAC58      <---------ANAC46 <---------ARR11(3)    <---------ANAC46      <---------ANAC58 --------->AHL20(1)  --------->ZAT14      <---------MYB52(1) --------->ARR14(2)  <---------ZAT14     <-------GAMYB                       ------>NtERF2 -STF1             <---------LBD16      <---------ANAC46  <---------AtMYB61  --------->ORA47(1) ---TGA1--------->ETT(2)               <------NtERF2      --------->ALFIN1   <---------SPL7         < -----YAB1  <---------GLK1(2)        --------->ALFIN1   <-----------RAV1(1) --------->DEAR3(1) <-----   caatatcttgtcgagattgtctctggagtgtatagcaaggtgtcgttgtgtatcgaaactgtggtcgtccataattcgccgtccaaattacaaccagttg  19987300           ----------------------->TaNAC69(2)     <---------WRKY38(1)     <---------WRKY12    --------->WRKY18(1)        <----------DOF2   <-----------HVH21   --------->LBD16   <--------ZAP1      --------->DEAR3(1)                          <-----------GT1  --------->LBD16    --------->ANAC46              --------->ANAC58 --------->LBD16   <---------ALFIN1                --------->ANAC58        --------->ANAC46 --------- ---------LBD16    --------->REM1(1)      ---------->DOF2      <-----------GT1         --------->WOX13(1) ----MYB46(3)     <---------ZAT14 ---------->ID1   --------->ANAC46        <---------At4g35610  <----   ttcccggtcaagtcttcggctacaccgcgtcttcttttcgtcttcaaagttgcacgagagttgtttttcaactcttcacctcagcatttcaatccgaata  19987400                                                           <---------ANAC58                                                        <-----------RAV1(1)                                                      <---------ICU4                                                      --------->YAB1                                           <---------ARR14(2)               --------->O2                <---------ARR11(3)             <---------ALFIN1              <---------GLK1(2)<---------SPL7            <------NtERF2                  --------->ARR14(2)          --------->ETT(2)               ----------->ARR10 <---------ANAC58         ---------->ARF1          <---------HSFB2a(2)<---------ATHB51  <---------CCA1(2)               --------->HSFB2a(2)<---------ATHB12 >LBD16  ---------->ID1  --------->At4g35610--------->GLK1(2)       <---------AtLEC2    --------->At4g35610 -------GT1------>NtERF2 <---------At4g35610--------->ARR14(1)  ------>ZmHOX2a(1)       <---------At4g35610   actcgtctcttgtcgccacttctcttcagaagacttctagcacaagattctctcaattatgtcgtcctgtccatggactgatatgtagtcagcatatcga  19987500                                         ----------->GT1                                      <------ZmHOX2a(1)                                   <-----------RAV1(2)                                 ----------->RAV1(1)                                <---------TGA1a                                --------->bZIP60(2)                                --------->O2        --------->AHL20(2)      --------->TGA1a        <---------AHL20(2)      --------->ANAC58       <---------AHL20(2)       --------->ANAC58                                            <--------    --------->AHL20(2)          --------->ANAC46                         <------ZmHOX2a(1)  <--------    --------->ATHB51            ----------->HVH21          --------->MYB52(1)            ----------->GT1    <---------AHL20(2)       --------->TOE1(2)         ----------------->AG--------->At4g35610      -   agagaattatttatttgccttgatttctaatcccacgacaggagagtatatagccttacccaaacagagaatggaggagatgaattcagagacgataatt  19987600  Previous    Next  AGI:  At1g53550.1    Description:  F-box family protein. Identical to Putative F-box protein At1g53550 [Arabidopsis Thaliana] (GB:Q9LPH0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G55070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 19987079    to: 19988305    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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