Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ICU4                                                              --------->WRKY18(1)                                                             <-----------HVH21                                                            <------MYB46(1)           <---------bZIP60(1)  <---------ANAC55(2)                                    <---------ARR14(2)           --------->bZIP60(1)  --------->ANAC55(2) <---------GLK1(1)                  <---------MYB52(1)        ----------->HVH21 <-------TEIL         --------->GLK1(1)            <---------ARR14(2)    >>>>>>>>>>>>>>>>>LFY   ----- ----------->AtSPL3  --------->ARR14(2)      ---------->DOF2<------MYB83<-----------GT1         ----- ------------AtSPL3  <---------GLK1(2)     --------->YAB1--------->ARR14(2)        ----------->TGA1 ------------AtSPL8  <---------ARR14(2)   <---------ATHB12 --------->MYB59--------->MYB46(3)    -----   aagtacgtattgcgatttacaaggattccccatttcattagctaatcaaaagagaaccggttcggtcatgtttttaaccaatgttgtgacgacaatacaa  19984900                                                                                <------MYB46(1)                                                                 --------->ANAC58                                                                 --------->ANAC46                   -                                                                 --------->ANAC58  ----------->GT1<--      ----------->GT1       <-------TEIL                         --------->ANAC55(2)              <--   --------->ALFIN1     --------------->AtSPL8                   <---------ANAC55(2)        <------MYB83 ---->ANAC46            <---------------AtSPL3              <----------DOF2     <------MYB83<------MYB46(1) ---->ANAC58            <---------------AtSPL8      <<<<<<<<<WRKY18        <---------YAB1  <---------TOE2(3) ---->ANAC58            --------------->AtSPL3     --------->WRKY18(1)   ---------->DOF2   --------->MYB59   gaaaaatggggctaatagataacttataggtacgtttttggaaaacttctgaagtcaaggctcttttacgcaatataaagataggttgaaaattaggttt  19985000                                                                   ------>NtERF2                                                                   <------NtERF2                                                               --------->DEAR3(1)                                                        --------->AHL20(2)                                                    <---------YAB1 --------->LBD16                                                    --------->AHL20(2) ---------->GT1                         ------>ZmHOX2a(1)   <---------ICU4 -------TOE1(3)          <---------TOE1(3)      <---------ANAC46 <---------LBD16 --------->GLK1(2) <- -------TOE2(3)--------->AHL20(2) <<<<<<<<<TBF1<---------At4g35610--------->DEAR3(1)        <--------   aagggtaaaatagacaattcaatactgaaggttttcttcttcctcatgctgcttataaataaacatcgccgcgataagggtagaatccaagtgcctttga  19985100                                         ------>NtERF2                         ------>ZmHOX2a(1)                                        --------->LBD16                   <---------ANAC58               <-----------GT1         <---------ANAC58                   <---------ANAC58      --------->ZAT14                  <---------ANAC58               <----------DOF2      <---------ZAT2                   <---------ANAC46          <----------DOF2      <---------ZAT14                 <---------LBD16           ======================HOX2a_HOX2a      --------->ZAT2                <---------MYB52(1)          ------>ZmHOX2a(2)     --------->ANAC46 <------ZmHOX2a(2)                 <-------GAMYB               <------------------------ANAC81  <---- --------GLK1(1)                  <---------ANAC58            --------->ARR11(3)      --------->ANAC58 --DOF2     ----------->GT1       <---------ANAC58            <---------ARR11(3)      --------->ANAC58   gagatcagagcagcgagttacaatgctgttcttgttccgttgcgggcataaatcgaaacccattgatcttttctttgcttcctcttgcaagtaatcttct  19985200                     ------>ZmHOX2a(2)                     ==========================HOX2a_HOX2a                    ===========================HOX2a_HOX2a                    <------ZmHOX2a(2)                   <---------ARR11(3)                   <---------AGP1                   --------->ARR11(3)         ------>MYB46(1)                  --------->RVE1(1)         <---------MYB59      <---------ARR14(2)                <------ZmHOX2a(1)                                    <-------      --------->ARR14(2)       <----------DOF2------>MYB83                                --------->ICU4 ------DOF2    ---------->DOF2 --------------->AGL15           <----------DOF2         <---------YAB1   ttactgcaaatcggaagaaaagatctcacatttctttgatcaggaaccaaactctcttatcgtttcttttccttcttgttgttgtttttgtgattatgtt  19985300                                                                             <---------AHL20(2)                                                                 --------->AHL20(2)                       --------->MYB52(2)                   <---------RAP2.6(3)                       <---------MYB46(3)                   <------NtERF2   --------->AHL20(2)           <------ZmHOX2a(2)                               --------->RAP2.6(2)      <---------At4g35610          <---------ARR14(2)   <----------DOF2           ------>NtERF2      <---------AHL20(1)  --------->CCA1(2)    <XXXXXXXXXXXXXXXXXXXXMIR418      --------->LBD16     <---------AHL20(2)      <  <---------bZIP60(2) <-------TEIL                    <---------LBD16       --------->AHL20(1)    <-- --YAB1   --------->ARR14(2)  <---------ICU4       <-----------GT1<---------AHL20(2)--------->At4g35610   tgtgatatggccgatccaaatgggttcgttcatctttatattagttcccaatttcacccggccgaaatttaaaatcaatttaatggagcagtctctctat  19985400                                                           <---------AHL20(2)                      <-                                            <-----------ARR10                                     ---                                   <---------GLK1(1)      <---------AHL20(2)                      <--                                   --------->GLK1(1)      --------->AHL20(2)                      ---                               <---------ANAC46           --------->AHL20(1)               --------->YAB1                          <---------AtLEC2  --------->GLK1(2)                             <---------YAB1    <---------GLK1(2)   <-----------GT1     <---------ARR14(2)                         --------->LBD16  <---------YAB1      <---------AHL20(2)    --------->ARR14(2)       <---------DAG2   <---------ANAC46 -----------GT1     <---------AHL20(2)     <---------GLK1(2)    --------->TOE2(3)    <---------LBD16- -------AHL20(2) ------->TEIL  --------->ETT(1)           <---------AHL20(1)   <---------AHL20(2)<---   ttttatgattctctacatgtatattttttcatgtcggaaatcagagattctgccctaaaatttattcgtcaatttttgtaatttatctccgtataataga  19985500            <---------AHL20(2)           --------->ICU4      ----------->GT1                            ------------>CBF      --------->ANAC46                           <---------ATHB12 -----ZmHOX2a(2)                                ------>MYB83                                  ------- ------>ARR11(3)           <---------MYB52(1)   ------>MYB46(1)                           <---------AHL20(2) -------ARR11(3)    <----------DOF2           <---------MYB46(2)                          --------->AHL20(2) ------>AGP1--------->AHL20(2)                <---------MYB59                            --------->AHL20(2) ----->ZmHOX2a(2)<-----------GT1            -------->P                            --------->ZAT14 ------GLK1(1)  <-----------GT1        <-----------GT1--------->YAB1              <---------ZAT14 ---   gatcttagacgtaaatatttatcttttctgttttgtttgattcacttaccaaacaatgttaagtttcgatgtctgagttatttgtgtagtatttaataac  19985600              ---------->DOF2                                                      <---------ANAC58   --------->ARR14(2)                ------->TEIL                      <---------YAB1   -------------   <---------ARR14(2)  <------------CBF --------->AHL20(2)             <---------TOE2(3)<----------DOF2 -->YAB1    <---------YAB1        --------->ICU4                   <----------DOF2 <---------ANAC58 ------>MYB52(1)     <---------AHL20(2) <---------AHL20(2)---------->DOF2          <---------ANAC46   aaatggattcgactatgaaagaaaaaattgtctgtaatgaatttatatgtagcattacttcaaagactggtttatggtagtgaatgcgtgctttatagtg  19985700                                      --------->ZAT2                                                -                                     --------->ANAC58                                               <                          <------MYB83<---------ZAT2                                              <--                          <------MYB46(1)                                                        <---                        <---------MYB52(1)                                                       <---            <---------WOX13(1)       ------>MYB46(1)                                            -----        --------->At5g28300          ------>MYB83--------->At4g35610                        ---------   <---------YAB1      <---------At4g35610 ------>NtERF2          <----------DOF2          <---------YAB1 -->AGL15<---------YAB1<-------GAMYB --------->ANAC58        <-------TEIL  <---------MYB46(3) <------   gaagtatgactgtaattgatttttcagttggtatggaccaagctccgactaagcagcattcgattcatctttcacattggttgaagaagtaatgtgattg  19985800  Previous    Next  AGI:  At1g53541.1    Description:  unknown protein Range:  from: 19985053    to: 19985163    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g53542.1    Description:  unknown protein Range:  from: 19985296    to: 19985481    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g53543.1    Description:  unknown protein Range:  from: 19985637    to: 19985792    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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