Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              <------                                                                          <------MYB83       <-------                                                                 --------->YAB1              <-------        --------->ANAC58                                        <-------TEIL            --------->ALFIN1        --------->ANAC58       <---------HSFB2a(2)          <---------YAB1<------MYB46(1)   <-------TEIL      ---------->DOF2          --------->HSFB2a(2)          <---------TOE2(3)       --------->DAG2 --->At5g28300     ------>ZmHOX2a(1)    --------->ARR14(2)  <---------TOE1(3)      ---------->DOF2   aatagaagaaaagccatggtcctgatattgtttctgaaacccgaacttcaatatcaaatgttaagattcatattgttggtatcgaaaaagctggtgcgtt  19983700      <---------YAB1      --------->ICU4    --------->YAB1                                                                          ---------   ----------->GT1                                            --------->ANAC46              ---------   <---------YAB1                                      <---------ZAT18                      <-------- -GAMYB<---------ICU4                               <---------LBD16                         <-------- ----DOF2                                      --------->ATHB12     <---------ATHB12       <---------AHL20(2) --ANAC58                                     <-------TEIL    --------->ANAC58             --------->AHL20(2) --ANAC58        ------>ZmHOX2a(1)        <---------YAB1      --------->ANAC58         --------->AHL20(2)   atgggatgataattgtgtccttgatacaaagttttatagatgttttgattcatttgggggactcaagccaattgttcaatgttcaccaaaaaaataaatt  19983800         <---------YAB1        --------->TOE2(3)                                                ----------->RAV1(2)       --------->YAB1                                                  <---------RAP2.6(3)       <---------ICU4                                                  ------>NtERF2       --------->ATHB12                                                --------->ORA47(1)      --------->ICU4                                                  --------->DEAR4(1)      <---------ATHB12                                        <---------ZAT14 --------->ANAC58                                            --------->DOF5.7(2)        <-------PIF5 --------->ANAC58                                          <---------ANAC58            --------->bZIP60(2) --------->ANAC46                                 --------->RAP2.6(3) ----------->HVH21--------->ANAC58 >AHL20(1)                                       --------->MYB52(1)   --------->DEAR3(1)------->PIF5 >AHL20(2)                         --------->ANAC58        <---------ANAC58----------->HVH21 -AHL20(2)               <---------YAB1        ---------->DOF2--------->ZAT14          --------->ANAC46 -AHL20(1)         <------NtERF2   --------->ANAC58<----------ID1    --------->DEAR3(2)--------->ANAC58   tagacgaaatcattaatgggcctcgatattatagcccaagaaaaaacaaaaaaacggcaaggcgttcactcgccgacctgatgcattgcacgtcgtctca  19983900                           ----------->RAV1(2)                           --------->At4g35610                        ------>ZmHOX2a(2)                           --------->ZAT2                            <------ZmHOX2a(2)                       --------->ANAC58                             <---------ARR14(3)                       --------->ANAC58                             <---------ARR14(2)             <---------HSFB2a(1)                                    <---------ARR11(3)             --------->HSFB2a(1)                                    --------->ARR11(3)             <---------HSFC1(2)                                     --------->ARR14(2)             --------->HSFC1(2)                                    --------->HSFB2a(1)           ----           <---------GLK1(2)--------->TOE1(2)           ---------->DOF2                         <----         --------->ANAC46  <---------At4g35610      ---------->DOF2--------->HSFC1(2) <---------ARR14(2)      ----------->RAV1(1) ------->TEIL         ----------->GT1     <---------HSFB2a(1)--------->ARR14(2)     --------->ANAC46---------->DOF2      <---------DOF5.7(2)--------->MYB52(1)    <---------TOE2(3)   gccctcaacaccagaaacttcttgaaagcacctgagaagtctggtaacgtcgttaaaagaaagaaacgaagatccctgatttttcaaggataccatcgat  19984000                                                                                          ------>MYB83                                                                                       <---------MYB55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                         --------->KAN4(1)                                        --------->SPL7                         <---------KAN4(1)                                      <---------SPL7           --------->ANAC58                                                   <---------------AtSPL3           --------->ANAC46           <----------DOF2                         --------------->AtSPL3   --------->AHL20(2)    --------->HSFC1(2)                                  <---------At4g35610  <---------AHL20(2)     <---------HSFB2a(1)                         --------->HSFB2a(1)  -------->P  --------->AHL20(2)     --------->HSFB2a(1)                         <---------HSFC1(2)--------->DEAR3(2) --------->AHL20(2)      <---------HSFC1(2)                          <---------HSFB2a(1)  ------>MYB46(1) <---------AHL20(1)     <---------KAN4(2)                            --------->HSFC1(2)--------->MYB46(3) ----->YAB1--------->ANAC58        <-----------GT1       ----------->TBP<-------TEIL  ------->TEIL --ZmHOX2a(2)<---------GLK1(2)   --------->YAB1          --------->AHL20(2)  --------->At4g35610   --   caaaataattttcaagaaactcgcagaatgttctatcttactttccatactctctccctataaatatgcgaaggctcgtagctgtacgaaccaacaagga  19984100                                                      <---------ATHB12                                          ---------->DOF2                XXXXXXXXXXXXXXXXXXXX>MIR829.2       --------->WOX13(1)                          <----               --------->ANAC58        --------->ANAC46                                    --------->YAB1             ---------->DOF2  *TSS     --------->ANAC58          ----------->GT1         --------->ANAC46      <-------TEIL---------->DOF2      --------->ANAC58        <------ZmHOX2a(1)         --------->ANAC58 -------->DOF2 --------->ANAC58      --------->MYB52(1)--------->YAB1                    --------->ANAC58   gcaaagagttcatagcaaagcaaagcttcaaaacagagcaaacgcaaagagtagcaatcacaagaggaagtgaaacgatgtctctaattccaagcatctt  19984200                                                                              --------->ARR14(2)                                                                         <------NtERF2                                                                         <---------MYB52(1)                                                                        <-----------TGA1                                                                        <-----------HVH21                                                                        ------>NtERF2                                                                        <---------SPL7                                                                        <---------RAP2.6(3)                                                                       --------->RAP2.3(3)                                                                       --------->DEAR3(1)                                                                      <------NtERF2                                                               <---------ANAC58                                                               <---------ANAC58                                                          <---------HSFB2a(1) <---------ARR14(2)                                                          --------->HSFB2a(1)<------ZmHOX2a(1)                            <---------MYB52(1)           <---------TOE2(2)   --------->ATHB12--------                         ------>ZmHOX2a(2)               <---------TOE1(2)  --------->ICU4   --------             --------->MYB52(1)                          <---------TOE1(3)  <---------YAB1   --------           <---------MYB52(2)                        --------->SPL7   --------->RAP2.3(1)   ---------        <----------ID1  <------ZmHOX2a(2)        ===================================HOX2a_HOX2a      >>>>>>>>>TBF1    <---------ARR14(2)        ------>ZmHOX2a(2)   <---------RAP2.3(1)  ------->TEIL  ==============================HOX2a_HOX2a     <------ZmHOX2a(2)    ------>NtERF2     --------->ANAC58  <------ZmHOX2a(1)    --------->ARR14(2)       ====================================HOX2a_HOX2a  =============================HOX2a_HOX2a     <---------ARR14(2)   --------->ANAC46   --------->ANAC46 -----LBD16--------->MYB46(3)                  --------->ARR14(2)----------->HVH21     --------->ANAC58   cggaggaagaagaacaaacgttttcgatccgttctcgctggatgttttcgatccgttcgaaggtttcttgacgccgtcaggattggcaaacgcacccgct  19984300                                                         <-------PIF4                                                         ------->PIF4                                                         <-------MYC2                                                         <-------PIF5                                                         <-------MYC3                                                         <-------MYC4                                                         ------->MYC4                                                         ------->PIF5                                                        <---------ANAC55(2)                                                        --------->ANAC55(2)                                                        <---------TGA1a                                                        <---------O2                                                        --------->TGA1a                                                        ==========================bZIP_DOF                                                        --------->O2                                                       ------------>OsbHLH66                                                      <---------ALFIN1                                             --------->TGA1a                                             ----------->RAV1(2)                                             <---------TGA1a                 --------->LBD16                                             <---------At4g35610         <-----------GT1                                             <---------O2------->MYC2  --------->GLK1(1)                                             =====================================bZIP_DOF    ----------->HVH21    --------->DAG2      --------->At4g35610       <----------DOF2<------ZmHOX2a(1)    --------->ALFIN1    ---------->DOF2      --------->O2------->MYC3 --------->ARR14(2)  <-----------RAV1(1)   ===============================bZIP_DOF       <---------ARR14(2) ------->TEIL       --------->ANAC58         =====================bZIP_bZIP <---------LBD16 ->ANAC58<---------At4g35610               <---------ALFIN1           <-----------ARR10            -- ->ANAC46<------NtERF2  ==========================================bZIP_DOF<---------At5g28300    ---- ->ANAC58--------->At4g35610   <---------ANAC46       <------------OsbHLH66<---------LBD16     ------ >MYB46(3)          --------->ANAC58     <---------ATERF1(1)         <------NtERF2  <---------TOE2(3)   atggatgtggcagcgttcacaaacgctaaagtggattggagggagacacctgaggcgcacgtgttcaaggcggatttaccgggactgaggaaggaagagg  19984400                                                                                      --------->REM1(2)                                                                                     --------->ALFIN1         --------->ALFIN1                                                          <---------ANAC46        <-------GAMYB                                                             <------NtERF2       <---------MYB46(3)                                                        ------>NtERF2      -      <---------AtMYB61                                                        <---------ABI4(2)  <--   --------->ALFIN1 ----------->RAV1(1)                                      --------->ALFIN1 <------ -------->DOF2   ----------->GT1              <------ZmHOX2a(1)            <---------TGA1a --------->At4g35610 ------->HVH21<------ZmHOX2a(1)      --------->ALFIN1                      <---------O2    <---------At4g35610 ----->GT1  <---------TOE2(3)  <---------At4g35610   --------->YAB1        --------->O2--------->ALFIN1   tgaaagtggaggttgaggatggcaacatacttcagataagtggagagaggagcaatgagaatgaagagaagaatgacaagtggcaccgtgtggagcggtc  19984500                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                        <---------At5g28300                                                                                     <-------GAMYB                                                                                    <---------DEAR3(2)                                                                                    <---------MYB46(3)                               <------NtERF2                                       <---------DREB2C(2)                              --------->LBD16                                      --------->ETT(1)                             <---------ANAC46            --------->ANAC46        ------------>AtMYB77                            <---------LBD16              --------->ANAC58     <-------GAMYB        --------->ZAT18    --------->MYB52(1)            --------->ANAC58    <-----------RAV1(1) <---------------------WRI1------>NtERF2               ---------->DOF2       --------->ALFIN1 -------->ALFIN1        <---------At4g35610        --------->GLK1(1)       <---------ANAC58 -------ANAC46        <---------TOE2(3)            <---------GLK1(1)       <---------ANAC46        -- -----HVH21    <------ZmHOX2a(1)                 <------ZmHOX2a(1)         <---------ANAC58  <-------   gagtgggaagttcacgaggaggtttaggctgccggagaatgctaagatggaggaaatcaaagccagtatggaaaatggtgtgttgtcggttaccgtgccc  19984600  Previous    Next  AGI:  At1g53530.1    Description:  signal peptidase I family protein. similar to AGL64, peptidase [Arabidopsis thaliana] (TAIR:AT1G29960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39503.1); contains InterPro domain Peptidase S26A, signal peptidase I; (InterPro:IPR000223); contains InterPro domain Peptidase S24, S26A, S26B and S26C (InterPro:IPR015927); contains InterPro domain Peptidase S26A; (InterPro:IPR014037); contains InterPro domain Peptidase S24, S26A and S26B, C-terminal (InterPro:IPR011056) Range:  from: 19981814    to: 19983752    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g53540.1    Description:  17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156). Identical to 17.6 kDa class I heat shock protein (HSP17.6) [Arabidopsis Thaliana] (GB:P13853;GB:Q9C8L3); similar to ATHSP17.4 (Arabidopsis thaliana heat shock protein 17.4) [Arabidopsis thaliana] (TAIR:AT3G46230.1); similar to low molecular weight heat-shock protein [Brassica rapa] (GB:AAB72109.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 19984130    to: 19984777    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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