Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <------NtERF2                                                                                    ------>NtERF2                                                                                   --------->RRTF1(3)                                                                                   --------->RRTF1(2)                                                                                   --------->ATERF1(2)                                                                                   <---------ATERF1(2)                                                                                   --------->DEAR3(1)                                                                                   --------->RAP2.3(3)                                                                                   --------->DREB2C(2)                                                                                   --------->RAP2.3(2)                                                                                  --------->ORA47(2)                                                                                  --------->ERF1                                                                                  --------->RAP2.3(1)                                                                                  --------->DEAR4(2)                           --------->ANAC58                                       --------->RRTF1(1)                           --------->ANAC58                                       <---------LBD16             <---------AHL20(1)                                                   --------->ATERF1(1)             --------->AHL20(1)                       <---------HSFB2a(2)         <------NtERF2             --------->AHL20(2)                       --------->HSFB2a(2)        <---------ATERF1(1)             <---------AHL20(2)                      <---------LBD16             ------>NtERF2       <-----------GT1 --------->ANAC58          <---------ARR11(3)             --------->ANAC46 <---------ANAC46      --------->ANAC46     <---------YAB1         <---------HSFB2a(1)      <-------- <---------ANAC58      --------->ANAC58   <---------At4g35610     <---------ARR11(3)<---------RAP2.6(3) <---------ANAC58   <---------ZAT18       --------->At4g35610     --------->ARR11(3)--------->LBD16   atgtcgttttgacattttattgctcactcaagtcattttgctactgctgattatctctggaaatttgaaatcttcgtttctcgcgccggcattgaaatca  19968000                                                                                          <----------                                                                                         <---------ZAT2                                                                                         --------->At4g35610                                                                                         <---------At4g35610                --------->HSFB2a(2)                                                ------>ZmHOX2a(1)                --------->LBD16                                                  --------->HSFC1(2)                <---------HSFB2a(2)                                              <---------HSFC1(2)                ------>ZmHOX2a(1)                                                <---------HSFB2a(1)               <---------LBD16                  --------->At4g35610             <------ZmHOX2a(2)             <------ZmHOX2a(2)                  <---------At4g35610            <---------ARR11(3)            <---------ARR14(2)                  ----------->RAV1(2)            <---------ARR14(2)            --------->ARR14(2)                 ------->TEIL                    --------->ARR11(3)            --------->ARR11(3)            --------->GLK1(1)                    --------->ARR14(2)        <---------DOF5.7(2)              --------->ARR14(2)                    --------->AGP1        --------->MYB52(1)               <---------GLK1(2)                    <---------GLK1(1)     ----------->GT1                     <---------ARR14(2)            <---------DAG2 <---------At4g35610 -GLK1(1)  ------->GAMYB             <---------LBD16              <-----------GT1------>ZmHOX2a(2)  <   gcgagagaggtaacgatcctggaaactcttgtgttttctctcggatttgcatctgcctcttcttcgattttcaatttttgagatccttcgctgctgtttt  19968100                                     ---------->ID1                                    <-------GAMYB                                                   <                      --------->TOE2(3)                                                             <                      --------->TOE1(3)             <----------DOF2                              <---                     --------->At4g35610        <---------ATHB12                               ------               ------>ZmHOX2a(2)   --------->MYB52(2)         ------>NtERF2                    ------             --------->ARR14(2)    --------->MYB55(2)        <---------ANAC46                 <------     <---------YAB1  <---------At4g35610      --------->WOX13(1)                              <------ -------AGL2 <---------ARR14(2)    <---------MYB46(3)     ----------->HVH21                  <------- ---------ZAT6<------ZmHOX2a(2)  <---------MYB52(1) <---------DAG2                   <<<<<<<<<WRKY18-   tggtgttatacttcagatcggtaagcttaatcgccgtttgttgttcttcaatcactttctgcgacgcgttctctctctatcgctctgtcaaaatcgcagg  19968200                                   <---------At4g35610                                   --------->ZAT2                       ==================HOX2a_HOX2a                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                      ===================HOX2a_HOX2a ---------HSFC1(2)   --------->ARR11(3) ---------At4g35610  --------->ARR14(2) -----P              <---------ARR11(3)                                      <---------TOE2(3) --->ANAC58          <---------ARR14(2)       <-------GAMYB       <-----------GT1 --->ANAC58          <---------AGP1<---------ZAT2               <----------DOF2 ---TOE1(2)          --------->AGP1--------->At4g35610  --------->TOE2(3)    <---------TOE1(2) ---TOE2(2)<---------ARR11(3)     ------>ZmHOX2a(1)     <---------MYB59      <---------TOE1(3) ----RAV1(2)        <---------CCA1(2)        <---------ANAC58--------->ARR11(3) -------->HSFC1(2) ----------->ARR10         <---------ANAC58<---------ARR11(3)         --------->WOX13(1)   taagcttcttcaatttcttcttagatcttcacattcctgctgcgatttcgttgctatacctaagctctttacaatttctaaggtttgtgtcaatctcgaa  19968300                                          --------->YAB1                                        <----                                        --------->GLK1(2)                                      ------                              --------->ARR14(2)         --------->MYB52(1)                    ------        --------->YAB1        --------->ZAT14        --------->GLK1(2)               <---------REM1(1)       ----------->GT1        <---------ARR14(2)    <---------GLK1(2)    <-------TEIL<---------ANAC46      <---------WOX13(1)      <---------ZAT14--------->SPL7      <---------ANAC46 ----------->HVH21   tcagggagattgataaaccgatttgtctccagtattctgaagaatcgtaagtcggaatctaactgttgagttgagttcatcgctgtgatgtagaaaccct  19968400            <---------ZAT14          <---------ZAT14    --------->HSFB2a(2)               --------->GLK1(1)   <---------LBD16              ------>ZmHOX2a(2)    ------------>CBF   <---------ANAC58            <------ZmHOX2a(2) <-------MYC2           <---------MYB52(1)   <---------ANAC58            --------->GLK1(1) ------->MYC2         <---------ANAC58  <---------LBD16              <---------GLK1(1) ------->MYC3         <---------ANAC58 -----MYB52(1)           <-----------GT1         <-------MYC3     <---------GLK1(1) --->TOE1(3)<---------ZAT18   <---------ARR14(2)<----------TaMYB80--------->GLK1(1)        --------->ZAT6 --->TOE2(3)--------->ZAT14   --------->ARR14(2)<---------At4g35610<---------ARR14(2)     <---------YAB1   taatttcgggactgtgcagtcgaaattttgccgatctctgaaatctatgcatatgcccaatttctagggtttccgttttctaaatcgtttttatgactag  19968500                                 ------->TEIL                                <-----------GT1                             <---------------AtSPL3                                             -----                      <<<<<<<<<<AtWER                                                       ---------                     <---------ZAT6                                                   <---------ANAC58                   <---------At5g28300   <---------At4g35610                          <---------ANAC58           <---------YAB1    --------------->AtSPL8    --------->At4g35610   <---------ARR11(3)<-----         <---------ICU4  --------->MYB52(2)--------->WRKY38(1)         ----------->HVH21   <---------         --------->YAB1<---------MYB52(1)--------->At4g35610--------->MYB46(3)       <---------ICU4   aaactagttgatcatcacagttactgttagttttgtacctctccgatgactatgaactgctaactactgaagtttgacaggtcttaatgcttactttgta  19968600                                                                                         ------>ZmHOX2a(2)   <---------ANAC58                                                                     --------->At4g35610   <---------ANAC58                                  --------->AHL20(2)                <---------ARR11(3) -->TEIL                                      ----------->GT1                 <---------AHL20(2) ------>AtSPL8                               <---------TOE2(3)   ----------->GT1       --------->ARR11(3) ------GT1                    <---------MYB46(3)     --------->YAB1<---------YAB1<---------WOX13(1) - -DOF2           <-----------GT1         ------->TEIL<---------AHL20(2)    ----------->GT1    <------   cccattcgtgtttgcagtttaacaattttcagtagttagaatgaatataggttaattaaaacttgtattgtgaatactagttaattggtgatctcaatga  19968700                                                                                  --------->ZAT2                                                                               <---------At4g35610                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                        ------->PIF5                                                                        <-------PIF5                                                                       --------->At4g35610        --------->ZAT14                                                <---------ZAT2     <---------ANAC46                                                  <---------At4g35610   <---------ZAT14                                                     --------->ZAT2   --------->ZAT14    <-------TEIL                                   <-----------RAV1(2) --------->ARR11(3) -------->MYB59    <---------HSFC1(2)                         <---------AHL20(2)  --------->At4g35610 ---ATHB12         --------->HSFC1(2)                      ----------->GT1<-------TEIL   <---------ARR11(3)   gttagttcagtggagaatggaagtttcatttagagcatggttcttcatcttgtttgatatgaagttaatttgcaggtgcgtagcagcttgagatacttat  19968800                         <-----------RAV1(1)                         --------->ALFIN1                                      --------->ANAC55(2)                       --------->ANAC55(2)                              <---------ANAC55(2)                       <---------ANAC58                                 --------->ANAC55(2)                       >>>>>>>>CAMTA3                               <-----------HVH21                       <---------ANAC58                           <---------ANAC58        <----------                       <---------ANAC46        <------NtERF2      <---------ANAC58    ------>ZmHOX2a(1)                 <-------TEIL     <---------PCF2            <---------ALFIN1   <---------ANAC55(2)              --------->At4g35610----------->HVH21       --------->ANAC46     --------------->AtSPL8  <---------TOE2(3)    <---------ANAC55(2)    <---------ATERF1(1) <---------ANAC46------->TEIL     <-   attagaggttgacatgagatgcaacgcgtgttggagggacctggagggcagggccatttccaccacttgcggtcacttattatgtatcctatttacactt  19968900  Previous    Next  AGI:  At1g53480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03090.1) Range:  from: 19966882    to: 19968380    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g53490.1    Description:  DNA binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO39480.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083) Range:  from: 19966935    to: 19970620    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version