Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------DEAR3(1)             --------->MYB111(1)             <---------AtMYB61             --------->ALFIN1             <---------MYB46(3)             --------->MYB55(2)             --------->MYB111(2)      --------->ATHB12 ------->ANAC46 ------->ANAC58 ------->ANAC58  <---------MYB46(3) ------>DOF2<---------MYB55(1)                                                                      < -----ARR14(2)<---------MYB46(3)            --------->ANAC46                                       <- ---->ARR14(2)<------MYB46(1)               --------->LBD16                                       <-- ----RAP2.6(3)<------MYB83          --------->TOE2(3)                 <------ZmHOX2a(2)           <-- -->RAP2.6(2)--------->MYB46(2) <---------GLK1(2)                    <---------ARR11(3)          <--- -->ANAC46  <--------P      --------->TOE1(2)  ---------->DOF2       --------->ARR11(3)         -----   aacgccattgatgggttggtggatagaaaacctagaatccctaatcccgaaatgctgactagagaactcaagatcaaatagcttcgatggaaatgaaggt  19957400                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        <-----------ARR10                                                                                        --------->ARR14(2)                                                                                        --------->ARR11(3)                                                                                        <---------ARR14(3)                                          --------->At4g35610                           --------->ARR14(3)                                          <---------ZAT2                                <---------ARR14(2)                                          <---------At4g35610                           <---------ARR11(3)  --------->ATHB12                      <---------WRKY12                      <---------ZAT2 --------P                <----------CDC5 --------->ZAT2                      --------->ZAT2 ------GAMYB        <---------DOF5.7(2)<---------MYB52(1)                     --------->HSFB2a(1) ----MYB46(1)       ---------->DOF2   <-----------HVH21                       <---------HSFC1(2) ----MYB83        <---------MYB52(1) <---------DEAR3(2)                       --------->HSFC1(2) ------MYB46(3)   --------->DOF5.7(2)<------MYB46(1)                         --------->ANAC58     --- ---->ALFIN1    ----------->GT1      <------MYB83                            --------->ANAC58   <----   gggttgatttgaatcaaaccgttaaagccctgagcaagtcggtcagctaagtcttgtccatgtctctgaacttcttcccaagcttccaaagatctttcca  19957500                                                           <---------AHL20(2)                                                        <---------ARR11(3)                                                    --------->LBD16                                                  <---------LBD16                                                 <---------LBD16                                    -                          ------>ZmHOX2a(1)   --------->GLK1(2)     <------ZmHOX2a(1)               <              <---------MYB52(1)             --------->ARR14(2) ---------->DOF2              -------- -------->HVH21       <---------ARR14(2)     <---------GLK1(2)<---------YAB1          --------------- -----At4g35610       --------->ARR14(2) <---------LBD16--------->ARR11(3)         --------->ZAT6 ---   ctgacattttttcttcggtattcaaatcctcatgcgagacaaactcggaatctcgggagattttatcaaaggattaaactttgcaactctactaagagta  19957600                                                                      <---------TOE2(3)                                                             --------->RAP2.6(2)       --------->ARR11(3)                                    ----------->RAV1(1) ----------->GT1                               <---------GLK1(2)     <-----------GT1  --------->ZAT14 -------->DAG2       <---------At4g35610<---------ARR11(3)  <----------ID1       <---------ATHB12  <- ---------------AtSPL8                  --------->ARR11(3)--------->ANAC58 <---------ARR14(2)      <- --->GT1     <---------TOE2(3)         <---------GLK1(2)  --------->ANAC58 --------->ARR14(2)     <-- >AGL15<---------ARR11(3)        --------->At4g35610    ---------->DOF2   <---------GLK1(1)       --- ------->DOF2<---------TOE1(3)   <---------At4g35610 <---------HSFB2a(2)  --------->GLK1(1)--------->YAB1   aaaaggtaagaacttgaggtttaagcagagtgtttagctcaaaatctcagaaactcgagaaagccacaaatttacgatatccactcactgtaatcaaaat  19957700                                    <---------DAG2                                    <----------DOF2                                <---------At4g35610                               <------MYB83                                        <---------GLK1(1)                               <------MYB46(1)                                     *TSS -----MYB46(1)               <--------P                                  ------>ZmHOX2a(1) -----MYB83               --------->DAG2                                --------->TOE2(2) -------TOE2(3)           <---------TOE2(3)                         --------->RVE1(1) ------>MYB59           ---------->DOF2                 ----------->GT1 --------->TOE2(3)   taggtttcaagagaagttggaaactaaaaaggttggaactttatgtttttctcttggagagtttaacaaaaaatcctaagtatggagatgctatggaatc  19957800                                                         <-------MYC3                                                         ------->MYC3                                                        <---------O2                                                        --------->O2                                                        <---------TGA1a                                          <---------ATHB12                                        --------->WOX13(1)                                      ------------>CBF  --------->TGA1a                                --------->ANAC58       ------>NtERF2              ---------->DOF2   --------->ANAC58    ------>NtERF2           <----------DOF2  --------->ANAC58       --------->ANAC46      <-----------RAV1(1)           --------->TOE2(3)--------->ANAC58     --------->SPL7        <---------ANAC58       <---------ZAT14      --------->ANAC46  <---------DAG2           <---------ANAC58     <--------       --------->ZAT14     <-----------------------TaNAC69(2)     <------ZmHOX2a(1)   --------->ATHB12       --------->ZAT18 ===========================================bZIP_DOF           <---------YAB1       <---------ZAT18 ---------->DOF2<---------ATHB12<---------ALFIN1 ----------->RAV1(2)  <--------   tagcgagagtgaactttaaagtgaagaaagacgcaaacaaatcaatcaccttaccgccacgtttgataggaatgcctgtggctcttgatgataggcttgt  19957900       --------->ANAC58                                                                 --------->ARR11(3)       --------->ANAC58                                                                 <---------ARR11(3)   --------->ANAC46                                  --------->LBD16                   --------->YAB1   --------->ANAC58                                 <---------HSFB2a(2)     <---------TOE1(3)   --------->ANAC58 --------->At4g35610             --------->HSFB2a(2)     <---------TOE2(3) -ANAC58       ---------->ID1             --------->YAB1    --------->GLK1(2)   <-------TEIL -ANAC58   <----------DOF2             <----------DOF2 ---------->DOF2      --------->DAG2     <-----   ttttcaggcaagcctttgtctcttctgaacaagacccattcctttcatacttatccagaaagtttctggctcagccataaggttcacaatgatattcctt  19958000                                                                                         ------>ZmHOX2a(2)                                                                                         ------------                                                                                         ------------                                                                                        --------->At4g35610                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR11(3)                                                                             <---------------AGL15                                                                             --------------->AGL15                                                                            <-----------------AGL2                          --------->MYB46(3)                                <---------MYB111(1)     -                        ----------->RAV1(1)                                 <-----------------AGL3  <               --------->ARR11(3)                                         --------->MYB52(1)     <---               --------->ARR14(2)                     --------->CCA1(2) <---------MYB52(2)   ------->TEIL               <---------ARR11(3)                  ----------->GT1      <------------MYB.PH3(2) -----              --------->CCA1(1)            --------->ANAC58        --------->YAB1      --------->ARR14(2)              --------->RVE1(1)            --------->ANAC58--------->At4g35610         <---------ARR11(3) -----DOF2--------->AHL20(2)            --------->ZAT18 ---------->DOF2 <---------MYB59<---------ARR14(2)   tgttctcagtgaaaaaatatcttcttcaacagatgatttaggggcacaaaatcgagataaaagctgaaaacataactaactacttatgggatctgtaccc  19958100  <---------MYB46(3)  <-----------RAV1(1) --->AtSPL8                      <-----------GT1 --->AtSPL3                  --------->ARR11(3)                                     <---------WOX13(1) -------->At4g35610          <---------ARR11(3)                             <------ZmHOX2a(2) ---------At4g35610       <---------TOE1(3)                                --------->ARR11(3) ------MYB52(1)        ----------->HVH21                                   <---------ARR11(3) ---->TOE1(3)---------->DOF2<------ZmHOX2a(1)   <----------DOF2        <---------AtLEC2<---------TOE2(3)   ttagctgttgcaagtgaaagtagaagtgaaggatttttcttcataagagtcttttttggttcaacttccatttgcaagatcactagattgatgtttacta  19958200                                                                        --------->At4g35610                                                                        <---------At4g35610                                                                     <---------MYB52(1)                                                                    <-----------HVH21                                                                    <-----------TGA1                                                               <---------GLK1(1)                                                              --------->ARR14(2)                 <---                                                              ------->TEIL   --------->YAB1      ----                                               <---------RAP2.6(2) --------->ANAC46             -----                --------->YAB1       <---------ZAT14 <---------TOE2(3) --------->ANAC58         <----                --------->TOE2(3)<---------------AtSPL8      <---------GLK1(2)                 ------              <---------TOE2(3)  <------ZmHOX2a(1)   <---------TOE1(2) --------->ANAC58   <---------ANAC46   caaacaaatatttgataatgttaactcatgcgagaggagtacagatagttcggcttaggttctgaatctccgtcagcaatcttgaaactgagtcttgtac  19958300  Previous    Next  AGI:  At1g53450.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14830.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39439.1) Range:  from: 19954903    to: 19957783    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g53460.1    Description:  structural molecule. similar to unnamed protein product [Vitis vinifera] (GB:CAO39428.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60929.1); contains InterPro domain Vinculin/alpha-catenin; (InterPro:IPR006077) Range:  from: 19958158    to: 19960300    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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