Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------HSFB2a(2)                                                                       --------->HSFB2a(2)                                                                    ------>ZmHOX2a(1)                                                                  --------->HSFC1(2)                                                                  --------->HSFB2a(1)                                                                  <---------HSFB2a(1)                                                                 <------ZmHOX2a(2)                                                             --------->ALFIN1                                                            <-------MYC3                                                            <-------MYC2                             <---------ICU4                 ------->MYC2                             <---------AHL20(2)      --------->At4g35610      --------->TOE1(2)        ---------->DOF2     <---------YAB1           <---------At4g35610     --------->TGA1a   --------->AHL20(2)     <---------ICU4       <---------LBD16  <---------ARR14(2) ---------ICU4            --------->YAB1       <---------At4g35610<---------HSFC1(2) --------AHL20(2)         <--------HAHB4       --------->At4g35610------>ZmHOX2a(2) ------->AHL20(2)         --------->ATHB51    --------->MYB52(1)--------->ARR14(2)                  - ------->AHL20(1)        --------->AHL20(2) ---------->DOF2 ------->MYC3--------->LBD16         ----- ------>AHL20(2)       --------->YAB1<-----------HVH21   <---------ARR14(2)  <---------TGA1a  ------- >GT1<---------ANAC55(2) --------->ICU4     ===========================================bZIP_DOF------   aaaaattacttaaagtatttgactagaataattaatgctcgtcagaaacagcggaagcagaacgtggatccttctgggaacgtgagagataactattcgg  19938400                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                     <-----------RAV1(1)                                                                                    <---------TOE2(3)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2) -------->ICU4                                                                   <---------YAB1 ---->At5g28300             --------->AHL20(2)                               --------->AHL20(2) -->MYB59      --------->GLK1(1) --------->DAG2                            <---------AHL20(2) ----->GT1     <---------GLK1(1)---------->DOF2--------->YAB1              --------->AHL20(2)<-------TEIL   taaatatgggcaaatggatttcatatagaattaaaaaagtagttttctattatcaaatattggattccaaattttaaaaaaatataaatgttgcatacat  19938500                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                 --------->AHL20(2)                              <---------ARR14(3)          --------->TOE2(3)                              --------->ARR11(3)         ------>ZmHOX2a(2)                              <---------AGP1            <------ZmHOX2a(2)                              --------->ARR14(3)       --------->ARR14(2)                              --------->ARR14(2)       <---------ARR11(3)                              <---------ARR11(3)       --------->ARR11(3)                              <---------ARR14(2)       <---------ARR14(2)           --------->ANAC46         --------->ANAC46    <---------CCA1(2)        --------->GLK1(1)  <---------DAG2       <-----------GT1      ----------->ARR10        ----------->ARR10   <----------DOF2      -------    <---------YAB1      <-------TEIL              <---------ANAC46    <-----------GT1------->GAMYB  <---------ZAT6--------->AHL20(2)         <---------AHL20(2)    <---------AHL20(2)<-----------------   tatagtattatacatcattttaaaaattcgtagatcttgtttgatttttttttcgtagatccttgatttaaatcactttttattcaacgaaatgctaaaa  19938600                                      --------->ANAC58                                      --------->ANAC58                                      --------->ANAC46                                    <-----------GT1                                  --------->CCA1(2)                                                --                                 <---------ARR11(3)                                          <-------                                 --------->AHL20(1)                        <---------YAB1    --------                                 --------->ARR11(3)  <---------YAB1    <---------TOE2(3)  --------->ANAC46                              ------>MYB46(1)      --------------->AGL15 --------->YAB1--------->ZAT14     <-----------ARR10        ------>MYB83   <---------AHL20(2)     <---------YAB1     <---------ZAT14 --->DOF2                <-----------GT1     --------->AHL20(2)<---------ICU4          <---------ZAT18 ----WRI1        <-----------GT1--------->AHL20(2) <---------------AGL15<---------ATHB12 ------->TEIL   gaaaacaaatctaagtatttaacaaattcaccaaatatatacgacatttatttctattatttgaaatattactaatgaagattagtcagtgaaccccaca  19938700                 <------NtERF2                <---------RAP2.3(1)                <---------DEAR3(2)                <---------MYB46(3)                <---------ERF1                ------>NtERF2               <---------ATERF1(2)               <---------ANAC46               <---------DEAR3(1)               --------->ATERF1(2)              --------->ATERF1(1)             <---------RAP2.3(1)             ------>NtERF2             --------->LBD16            <---------RAP2.3(2)                <----------DOF2            <---------RAP2.6(2)               ------>ZmHOX2a(2)                                 -----           <---------LBD16<---------AHL20(2) <------ZmHOX2a(2)                                -------         <---------ARR14(2)                 <---------ARR11(3)                  --------->ARR11(3) <---------AHL20(2)       --------->AHL20(2)--------->ARR11(3)        ----------->RAV1(1)   --------- ------->YAB1<---------ATERF1(1)            --------->AGP1           <---------ETT(1)       <-------- --ALFIN1--------->ARR14(2)           --------->YAB1   <------------CBF         <---------ARR11(3) --->RAV1(1)<---------LBD16      <-------TEIL<---------RVE1(1) <---------AHL20(2)--------->GLK1(2)<--   taaataatccatttccggcggctagaaattaaaaatacatttatgagatcttttaaaaattgtttttaattccgacatatgagattttgttgatttttat  19938800 ------>TBP -->AHL20(2)        <----------DOF2                                                                 < >AHL20(2)     ---------->DOF2                                                                  <---- ---TBP   --------->ZAT6            <----------DOF2                                            ------ -------AHL20(2)    <---------DAG2 *TSS  <<<<<<<<<TBF1                                         ------   atatatgtatgaacactgaaagctttttccaactgtttctttcttcttccattttctctctcaatctctctccctctctcaatcttctggtctcgcctcg  19938900                                                                                             <-------                                 <---------AtMYB61                                           <-------   <---------ANAC46      --------->GLK1(2)                                                   <------- ---------CCA1(2)        <---------ARR14(2)                                           ---------->DOF2 -------HVH21            --------->ARR14(2) --------->LBD16                  --------->HSFB2a(2) --->O2     xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                           <---------HSFB2a(2) --->bZIP60(2)          <---------GLK1(1)  --------->LBD16   --------->CCA1(2)--------->ETT(2)  -----   tcgtctcttggagaattgagaattgggaatctgttttggttttgcccgagaaaaaaacgagagagatgggtttcatcttctcgaccgagaaagttgtgta  19939000                                                                      <-------TEIL                                                                   --------->HSFB2a(1)                                                                   --------->HSFC1(2)                                                                   <---------HSFC1(2)                                                               <---------REM1(1)                                <---------LBD16        ----------------->AGL1                        ----------->GT1                <---------AtLEC2   <<<<<<<<<TBF1     <---------ANAC58                  <---------ANAC46 --ANAC46            <---------ANAC46                  <---------ANAC58     <-----------GT1 --ANAC58            <---------ANAC58             <----------DOF2 <---------TOE2(3) --------->AHL20(2) --ANAC58            <---------AtLEC2             <---------DAG2  <---------TOE1(3)<---------AHL20(2) -->TEIL         <---------MYB52(1)  <------ZmHOX2a(2) <---------ANAC58--------->MYB52(2)   tgttcttcttctcatcttcgtttgcttggaaaatttcggatcaaatgctcaacttttgcctgaagatgaaggttcgtttcactattttaaatccacatct  19939100                                                                <---------At4g35610                                                          --------->AHL20(2)                              ------>ZmHOX2a(1)           <---------AHL20(2)                             --------->TOE2(3)            --------->AHL20(1)                     <-----------GT1                     <---------AHL20(2)                --------->AHL20(1)                       --------->AHL20(2)                <---------AHL20(2)                      <---------AHL20(1)       ---------->DOF2                <---------AHL20(1)                      --------->AHL20(2)  <---------------AGL15                --------->AHL20(2)                --------->ANAC58      <---------DAG2           ----               --------->AHL20(2)                 --------->ANAC58      <----------DOF2  <----------DOF2   caactaaatttcttcaattttattttcaactcctcaattctacttagtttcgaagcaaaataatttagatgctgctttactaaaaaagaaacttttagag  19939200                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                         --------->AHL20(2)           ------>ZmHOX2a(1)              <-----------RAV1(1) --------->AHL20(2)           <----------DOF2      --------->ZAT6              --------->AHL20(2)    --------->ANAC46 ---------->DOF2              --------->MYB52(1)          --------->AHL20(2)      --------->O2 ------>DOF2                  <-----------GT1     ------>ZmHOX2a(1)  ------->TEIL<---------LBD16   --   aaagaaagttatcctttagcaaattatcgaattaactgtattttttgttgtccttgttcaaaaaatatatgtatattaaattccacgggagatttatgaa  19939300  Previous    Next  AGI:  At1g53430.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G53440.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G14840.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G07650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39453.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39441.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39447.1); contains InterPro do Range:  from: 19938835    to: 19944756    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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