Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ---------->DOF2          --------->YAB1                <---------GLK1(2)       --------->YAB1              --------->YAB1                    <----------DOF2      <---------YAB1              <---------ATHB12         <---------ARR11(3)                      --     --------->AHL20(2)           --------->ICU4           <-----------ARR10                       --     <---------AHL20(2)           <---------YAB1           --------->ARR11(3)<----------DOF2   ------    --------->YAB1     --------->YAB1 --------->AHL20(2)<---------ANAC55(2)  <---------DAG2<---------AHL20(2)   attgaattttaataacaaaagacaaaaatagttgtaatcataaattctcaaaatgaacaagtatctcagtgctttgatactttttgctattgtttaatca  19928000                                                                            -------->ATHB1              ---------->DOF2                                         <---------WOX13(1)     --------->YAB1                                             <-----------GT1     --------->AHL20(2)                                        <---------AHL20(2)       <-----------GT1 ------->ANAC58                  <---------TOE2(3)             --------->AHL20(2)      <---------AHL20(2) ------->ANAC58              <----------DOF2               <---------AHL20(2)          --------->AHL20(2) --->YAB1---------->DOF2     --------->TOE2(3)             --------->AHL20(2)     <---------MYB52(1)-   caaacaattaaaaaagaaaagaatgaagaaactttaatgtataccatcactgtctatgggattaattaactaattgaattattcgttatttaactaaaac  19928100                                                                                              <------                                                                                            <--------HAHB4                                                                                            ---------                                                                                            ---------                                                                                           <---------YAB1                                                                                           --------->ICU4                                                                                         <---------ICU4                                   --------->YAB1                                        <--------HAHB4                                   <---------ICU4                                       --------->ICU4                               <---------YAB1                                           <---------YAB1                             <---------ICU4                                            <---------ARR11(3)                            --------->ICU4                                             --------->ARR11(3)                            <---------YAB1                                      --------->ANAC58                          --------->YAB1              -------->P                --------->ANAC58                   <---------YAB1  --------->ATHB12   ------>MYB83        --------->AHL20(2)<--------          <--------P--------->YAB1<---------YAB1      ------>MYB46(1)   --------->TOE2(3)--------->YAB1    --------->GLK1(2)  --------->YAB1                <---------ALFIN1 <-----------GT1--------->ICU4 -------->YAB1   <----------DOF2--------->YAB1<----------DOF2       <---------WOX13(1)--------->YAB1-   aaaaataatctggtagcgacttttatagtgatgattatcattgctattcttttcccaacctgataacttgattaacttaattaagccatgatcattatta  19928200                                                    --------->ANAC55(2)                                                    <---------O2                                                    <---------ANAC55(2)                                                    <---------ANAC55(1)                                                    <---------ANAC46                                                    --------->O2                                                    <---------ANAC58                                                    >>>>>>>>>>HY5                                                    <---------ANAC58                                                    <---------bZIP60(1)                                                    --------->TGA1a                                                    <---------bZIP60(2)                                                    --------->bZIP60(1)                                                   ----------->bZIP910(1)                                                   ----------->STF1                                                   ----------->bZIP911(1)                                                  <---------TGA2(2)         --------->ANAC58                                                 ----------->TGA1           --------->ANAC58                                                 ----------->HVH21        <---------ANAC58                                            -------->HAHB4                <---------ANAC58                                            --------->YAB1                <---------ANAC46                                            <---------ICU4               <------NtERF2                                           <---------ATHB51             <---------MYB46(3)                                           --------->ICU4            <------MYB46(1)             <---------ZAT14               <---------YAB1            <------MYB83                   <  --------->ICU4                         <--------HAHB4             <---------AtMYB61              -- ---YAB1     <---------ZAT18             --------->YAB1             <---------MYB46(3)             -- >ATHB51     --------->ZAT18             <---------ICU4          --------->ATHB12                  <- >ATHB12     --------->ZAT14            --------->ICU4          <---------YAB1                <------ -ICU4  ---------->DOF2               --------->YAB1<---------TGA1a<---------WOX13(1)        -------- --------->DOF2       <---------GLK1(2) --------->AHL20(2)----------->RAV1(1)                --------   gttaaagattaaaagtgcacaatagattcttcaatccaaagaataattatggtgacgtggcaacatatgattggtggctcgcattggatttagaaccttt  19928300                                                                                        --------->AHL20(2)                                                                                        ----------->TBP                                                                                      <----------DOF2                                                                                <-----------GT1  --------->AHL20(2)                                                          <----------DOF2  <---------AHL20(2)                                                         <---------ICU4 ----------DOF2                                 <---------MYB52(1)         --------->ARR11(3) ------------->AGL15                         ---------->ID1                --------->GLK1(2) ------->TOE2(3)                          <---------DAG2                   <---------ARR11(3) --------------AGL15--------->ANAC58      <----------DOF2                 --------->CCA1(1)         < ----DOF2           --------->ANAC58   <-----------GT1                    --------->RVE1(1)         - ->TOE2(3)      <---------At4g35610    ---------->ID1                   --------->AHL20(2)         -- ->TOE1(3)      --------->At4g35610   <-----------GT1             <xxxxxxxxxxxxxxxxsmallRNA(i)  -----   acctttaattgagaagacagcgaagccaaaattcccattttttccttttcgttatgcccaaaaaaaaaaaaaaaaaaaatctttacttctttatatacca  19928400                                                                           <---------DDF1                                                                          >>>>>>>>>>DREB1C                                                                          >>>>>>>>>>DREB2A                                                                          >>>>>>>>>>DREB1A                                                                          >>>>>>>>>>AtTINY2        <---------ICU4                                                    >>>>>>>>>>DREB1B        --------->YAB1                                                    ------->GAMYB       <---------ATHB51                                                   --------->DREB2C(2)   ------------>CBF                                                       --------->At1g77200 <------ZmHOX2a(2)  *TSS <---------ALFIN1                                --------->DEAR3(2)        -- ---------ARR11(3) --------->YAB1                                  <----------DOF2                 <- -------->ARR11(3) <---------ICU4        --------->At4g35610------>ZmHOX2a(2)                      <- ------->YAB1     <---------ATHB12   <-----------TGA1     <---------ARR11(3)                       -- ----->DOF2   ------------>CBF  <-------TEIL              --------->ARR11(3)                     ----   aagatcacaataatgtcacaatcatcaacaccgattcatcgtcatcttcaactcggtcttgatcttcgtctttctaccgacatctaatttgtttgtctga  19928500                           <---------------AGL15             --------->GLK1(2)             <---------ARR11(3)            --------->RVE1(1)            --------->CCA1(1)          --------->AHL20(2)        ---------->DOF2  ----------->GT1        <-----------------AGL1 <-------TEIL--------->ARR11(3) <---------TOE2(3)           <------MYB46(1) ------->ARR14(2)      <----------DOF2                      <------MYB83 --------GLK1(2)      <---------ANAC58                    <---------WOX13(1) --------ARR14(2)     <---------ANAC58   ---------->DOF2--------->ATHB12--------->HSFC1(2) ------->ARR11(1) <----------DOF2 <------ZmHOX2a(1)    <---------YAB1   <---------HSFC1(2)          - ------->ARR10--------->RVE1(1) <---------TOE1(3)    <----------DOF2   ------->TEIL                 <   agattcgtaaaaaaaaatctctttgctttctattaaggaaaagaaaagtttgcgactttgattggtttcgatgaagcttcgacaaacacagggttttgtc  19928600                                                            --------->ANAC58             ------>ZmHOX2a(2)    ------>ZmHOX2a(1)                       <---------TOE1(3)                          <---------ARR14(2)    <----------DOF2                     <----------DOF2     --------->ANAC58           --------->ARR14(2) -------->ARR14(2)       --------->GLK1(2)  <---------TOE2(3)                <---------ANAC58 ---------ARR14(2) --------->LBD16   <-----------GT1---------->DOF2          <---------ANAC58   tgaatccttttggtttatttccgagagaatttgtgttttttactttaagggtttgaaagaagaagcaagaacataaatgggttgtgctggatcgacacag  19928700                <------ZmHOX2a(2)               --------->ARR11(3)               <---------ARR11(3)         ----------->GT1         <-----------RAV1(1)                                     --------->TOE2(3)  --------->ANAC58        --------->TOE2(3)      ---------->DOF2                      --------->GLK1(1)  --------->ANAC58        --------->YAB1  ----------->GT1  <---------MYB52(1) <-----------HVH21  <---   tctcaagcagatggtaagatcaaatctatcttattttgttggattggagaaaaaaggaatcgttttttttatctgaaatcggtgagagaaaccctagttg  19928800                         --------->KAN4(2)                        --------->KAN4(1)                        <---------HSFB2a(1)                        --------->HSFB2a(1)                        <---------KAN4(1)                        --------->HSFC1(2)                --------->HSFC1(2)                 --------->ARR11(3)                <---------ZAT2                     <---------ARR11(3)                        --------                <---------HSFB2a(1)                <---------GLK1(2)                       ------>ZmHOX2a(2)        <-----------RAV1(1)                      ----------->ARR10                        <---------At4g35610   --------->YAB1       <---------HSFC1(2)   --------->DAG2                          <---------At4g35610   <---------ICU4      <---------KAN4(2)    ---------->DOF2 <-------GAMYB    --------->MYB59<--------  --------->ICU4<---------HSFC1(2)       --------->TOE2(3) --------->MYB52(2)<---------TOE1(3) ------ANAC46   --------->ZAT2           --------->TOE1(3) <---------MYB46(3)<---------TOE2(3) <-----   tgtaatcagtatgttggaagcttggaatgttcccttcttcttaccttaaagtagattttgttcgttgaaattgagggtttaggttttatctgatctgatt  19928900  Previous    Next  AGI:  At1g53400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45740.1); similar to unknown [Brassica rapa] (GB:ABL97984.1); contains domain PTHR13609 (PTHR13609) Range:  from: 19928420    to: 19930299    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version