Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ARR14(2)                   ----------------->AGL2                   <-----------------AGL2                   ----------------->AG--------->AHL20(2)                   ----------------->AGL3                   <-----------------AGL3                    --------->ATHB12        <----------DOF2<---------ARR14(2)               <-----------RAV1(2)  <---------AHL20(2)--------------->AGL15            <---------PCF5  --------->AHL20(2)<---------------AGL15            <---------PCF2 <---------YAB1    ----------------->AGL1   <---------ARR11(3)  ----------->GT1 -------MYB52(1)   <-----------------AGL1   --------->AHL20(1)<---------ANAC46                  ----- ----GAMYB   <---------CCA1(2)  ----------->GT1      --------->TCP20  --------->TOE2(2)        ------   gttattaattcttttctatcttccaaatttggaccagtaaattcaatatactatgggaccagttgattgtaacatatgaacacaatttgcaatctatcct  19921300               ----------->TGA1             <---------ICU4            <---------YAB1          --------->YAB1                                   <---------YAB1  --------->AHL20(2)                                       --------->AtLEC2                         -  <---------AHL20(2)  --------->KAN4(1)           <---------AHL20(2)                               <- --------->AHL20(2)   <---------KAN4(1)          --------->AHL20(2)                              ---- --------->AHL20(1)  <---------ARR14(2)       --------->YAB1                                    ----- <---------AHL20(2)  --------->ARR14(2)      --------->AHL20(2) <---------AHL20(2)             <----- <---------AHL20(1)  <---------KAN4(2)       <---------AHL20(2) --------->AHL20(2)           -------- ->ZmHOX2a(1)--------->YAB1     <-----------GT1 <---------YAB1  --------->ICU4            --------->TOE2(3) --->TOE2(3)--------->ICU4--------->YAB1 <---------ATHB12  ----------->GT1  <-----------GT1------>ZmHOX2a(1)   aaatttaatttctcatgatgacgaatattcaaaatttccctctatcatttattatatagtcatgaaaaaattagtattttacaaattatgttcctcaatc  19921400                                                                                               <-----                                                                                               ------         <---------TOE2(3)                                                           <---------HSFB2a(2) -------->YAB1                                                           <---------YAB1       ------- --------ATHB51                               <---------bZIP60(2)      --------->YAB1--------->HSFB2a(2) ----->WOX13(1)                               <---------ANAC58         <-----------GT1        <------ ---->AHL20(2)                                <---------ANAC58        <---------YAB1 <---------HSFC1(1) ----ATHB12        --------->DAG2          ----------->HVH21       <---------YAB1   <---------LBD16 ->WOX13(1)       ---------->DOF2          ----------->TGA1   <----------DOF2    <---------GLK1(1)   aattatagtttaatgtataaaaaagtcagggtttcaaattttgaaatgacgtttctacagaaaacttttgttattacaatttgaattctggaagagaaat  19921500                                     --------->TOE2(3)                                   <---------AHL20(2)                              <---------AHL20(1)                              --------->AHL20(2)             <---------YAB1                              --------->AHL20(1)           <--------HAHB4                           -                              <---------AHL20(2)           <---------ICU4                           <                             --------->AHL20(2)            --------->YAB1                           < ----ARR14(2)          ----------->GT1                    <---------ATHB12                       <--- --->ARR14(2)         --------->ANAC58                  ------>ZmHOX2a(1)                        ---- -->GLK1(1)           --------->ANAC58              <-----------GT1<----------DOF2               ---- ---GLK1(1)         --------->MYB52(1)     --------->YAB1 <---------YAB1            <---------------AGL15   ctgcatttcgatactacttataaaacggaaattttattttcttaatcacaaatatttcctatcattatactttagagaaaatttgactaaacttagaaat  19921600                                                                       ---------->DOF2                                                                      <---------AHL20(2)                                                                 <---------YAB1                                                                --------->AHL20(2)                                                                <---------AHL20(1)         <-----------GT1                                        --------->AHL20(1)     <---------AHL20(2)                                        <---------ICU4     --------->AHL20(2)         <-----------GT1                --------->YAB1 --------->AHL20(2)          <------------CBF                 <---------YAB1 -------->AHL20(1)         --------->ICU4        <----------DOF2<---------AHL20(2) ---------AHL20(2)     --------->At5g28300       --------->TOE2(3)   <---------AHL20(2)           --- ---------AHL20(1)    --------->YAB1         <---------GLK1(2)--------->ICU4                      --- ------AHL20(2)       ----------->GT1  <---------YAB1     --------->At5g28300                  ------ ----->AHL20(1)  <---------ATHB12     <-----------TBP    --------->TOE2(3)                <----------DOF2 ----->AHL20(2)  ------------>CBF    <----------DOF2     ----------->GT1              ------>ZmHOX2a(1)   aaaatatttattttccctaatcaatggtaaatattgacacttttatagatactttaaaaccgtaattataatttaaagtctatatgtccttccttttgtc  19921700                                                                   <------NtERF2              ------->GAMYB                                      <---------ANAC46              <---------ZAT18                                    <---------ANAC58             --------->ANAC58                           <---------WRKY12      <--------ATHB1                                    <---------WRKY38(1)  <---------ALFIN1 <---------ATHB12                                     <-----------HVH21<-----------GT1 --->ZmHOX2a(1)*TSS                          <---------ANAC58    <---------ANAC58         <----------DOF2 ------>ICU4 --------->ANAC58                <---------ANAC58   <---------LBD16      ---------->DOF2 ---->ID1    --------->ANAC46             <----------DOF2---------->DOF2 ----------->RAV1(2)   ctaatgaataattcaacgcactctcttcgtcttccctcttccttctttcttgtcgaggtcaaagatggcggattaacctgcacatctcaaagctttgtag  19921800                              --------->AHL20(2)                              <---------AHL20(2)                            <----------DOF2                      --------->ANAC58                   --------->bZIP60(2)                      --------->ANAC46                   --------->ANAC46               -------------                      --------->ANAC58                   --------->ANAC58               <------------                  --------->HSFB2a(2)             <---------At4g35610                 --------->ICU4                  <---------HSFB2a(2)             --------->ZAT2                    --------->YAB1             <---------HSFC1(2)                   --------->At4g35610       <---------ZAT14 <-------TEIL             --------->HSFB2a(1)          <---------GLK1(2)  ----------------------->TaNAC69(2)             --------->HSFC1(2)      <---------AtLEC2    --------->ANAC58   --------->ZAT14 ------->TEIL          ---------->DOF2   --------->TOE2(3)     <---------ZAT2 ------->TEIL      <---------ZAT6   attactagtaaacaaagcttccctaagcaactttaattttcatggattcttcagctcccaagtcatgaacttcaatacttcactagtcataatgtacgtt  19921900                                  <----------DOF2                             <---------ALFIN1                          --------->ARR14(2)                          <---------TCP20                       <---------GLK1(1)     <----------DOF2   ------>ZmHOX2a(1)                   <----------DOF2 -->AtSPL8           ------>ZmHOX2a(2)               <---------TOE1(3)                    <---------AHL20(2) ---AtSPL3         --------->ARR11(3)                <---------TOE2(3)         ---------->DOF2 <-----   tttttttctttcatttccattgatcctggttccactcttttagtctctgtaatttagggttctttgaattctgcaatctaagaaagaaatattaaaactt  19922000                                 --------->ANAC58                               ---------->DOF2                                                    <--                           ---------->DOF2                                                        <--                   ------>ZmHOX2a(2)                                                              ---                  --------->At4g35610           <---------LBD16                              <-------                 --------->ARR11(3)        <---------YAB1                                    <-------   <---------MYB52(1)----------->GT1  <----------DOF2                     <---------GLK1(2)  -------- -----DOF2     ----------->HVH21 --------->ANAC58           <---------GLK1(2)  <---------ANAC46   ---   tctctgttttgtttgatgtgatctggagaaaaagaaagcacttttatgtttctgggttatcaaattcttgaaattagattgtcttggagtttgtgatgtg  19922100                                                                    <---------AHL20(2)                                                                   <---------AHL20(2)                                                                   <---------AHL20(1) -------bZIP60(1)                                 --------->TOE2(3)--------->AHL20(1) -------TGA2(1)                                   --------->TOE1(3)--------->AHL20(2) ------>bZIP60(1)        <----------DOF2   --------->ANAC58       --------->YAB1 --bZIP60(1)            --------->TOE2(3)  --------->ANAC58      <---------YAB1                  <--- --ANAC46    --------->YAB1      --------->At4g35610          <---------WOX13(1)          ------>ZmHOX2a(2) ->bZIP60(1)<---------ATHB12     <---------At4g35610        --------->ATHB12              =========== -------->GT1--------->AHL20(2) ------->TEIL --------->WRKY18(1)--------->AHL20(2)        ===========   atgtaataagaccaataaaaactcaacctttatgtagctaaacccaagtcaagcttaacaattgattaatataatgtatggaattagatggatcgttttt  19922200  Previous    Next  AGI:  At1g53390.1    Description:  ATPase, coupled to transmembrane movement of substances. Identical to Probable white-brown complex homolog protein 25 (WBC25) [Arabidopsis Thaliana] (GB:Q9MAG3); similar to ATNAP12 (Arabidopsis thaliana non-intrinsic ABC protein 12) [Arabidopsis thaliana] (TAIR:AT2G37010.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G60740.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66057.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18176.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterP Range:  from: 19921715    to: 19927475    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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