Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ANAC46                                              <----------DOF2                                              <---------DAG2                                       --------->CCA1(2)                                       <------ZmHOX2a(2)                                      <---------ARR11(3)                                      --------->ARR14(2)                                      <---------ARR14(2)          ---------->DOF2                                      --------->ARR11(3)   ---------->DOF2                          <              ---------->DOF2     ---------->DOF2 <-----------RAV1(1)            <----------DOF2    - ---------->GT1     --------->AHL20(2)--------->AGP1 <---------ANAC46    ------>ZmHOX2a(1)--------->GLK1(2)   cacagaaaaaaaaactcaaagaaaaaatagatgaacaaaagatccaaactttttgttgtgtaaaagaagaaagtcctaaaacccttttagagaatcaact  19919800                                                                                            ---------                                                                                           <------NtERF2                                                                                           --------->At4g35610                                                                                     --------->ANAC58                                                           --------->At4g35610       --------->ANAC46                                                           <---------At4g35610     <---------ATERF1(1)                                                  <---------YAB1                   <---------ALFIN1                                                --------->ATHB51                --------->PCF2      -                                ----------->RAV1(1)  <---------YAB1   <---------ATHB12    <---------ATERF1(1) ---------AHL20(2)             <----------ID1  --------->ICU4    >>>>>>>>>>>>>>>>>LFY--------->ANAC58 -------->AHL20(2)        <---------ICU4       <---------YAB1   --------->ZAT6--------->MYB59--------   atttatatataagatgaactaaaaacaataaatgcgacaaaaattagacattattgttattagctaacaccaatggagattaggcccacggccagcgaca  19919900                                                          <---------ICU4               --------->AHL20(2)                         --------->YAB1    >>>>>>>>>>>>>>>>>LFY                                  <--------ATHB1               --------->LBD16    ------>MYB46(1)                                       <------------ATHB5          --------->ANAC58    ------>MYB83 --------->ICU4                     --------->ANAC58                  --------->ANAC46 --------->HSFC1(2)                                 --------->ANAC58                 <---------LBD16 <---------HSFC1(2)                  --------->ANAC58    <---------ATHB12         --------->GLK1(1) --------->HSFB2a(1)                 --------->ANAC46    <---------ATHB51         <---------GLK1(1) <---------HSFB2a(1) --------->AHL20(2)       <----------ID1                     --------->ARR14(2) -->HVH21 --------->At5g28300        --------->ANAC58    --------->ICU4        --------->ANAC46 ------>TEIL   --------->YAB1    ------------------------>ANAC81        --------->WOX13(1)  --------- --->RAV1(1)--------->YAB1    --------->HSFB2a(2) ---------->DOF2     <---------ATHB12--------->ANAC58   tgaaccttccactgtaataaaaattaaaacttcgaaaacacacaaaaaaaaacaaagcaataatggaatcgaatcattcaccagaaacccgcatgaaagt  19920000                                                       <<<<<<<<<GATA-1                                        --------->ANAC46------>ZmHOX2a(2)                                     <---------ZAT14   <<<<<<<<<GATA-2                                     --------->ZAT18   <---------GLK1(1)                                     <---------ZAT18   <<<<<<<<<GATA-4                           --------->MYB52(1)          <<<<<<<<<GATA-3      <---------ANAC58                           --------->YAB1             <---------ARR11(3)    <---------ANAC46                           <---------ICU4             --------->ARR11(3)    <---------ANAC58                          <---------AHL20(2)          <---------AGP1      ------>MYB83               <----------DOF2       --------->ZAT14 <---------CCA1(2)    ------>MYB46(1)              <---------ANAC58   --------------->AtSPL8<------ZmHOX2a(2)<---------MYB59 --------->MYB46(3)       <---------ATHB51   --------->DEAR3(1)      <-----------GT1               <- ->DOF2       <---------ANAC58  <---------ANAC46    --------->MYB59<----------DOF2        --------->ANAC46   ttaacaaacaaaacttgcttaagtgaaaataatggtttgtacactcaccgaagttagatctctctgtttctttaccttccttgaaaacttacaaacaata  19920100              ---------->DOF2                                                  --------->MYB52(1)    <-------TEIL                                                        <---------At4g35610       >>>  <---------ARR14(2)                   <---------TOE2(3)          --------->ZAT2            <------ZmHOX2a(1)  --------->ARR14(2)              <---------ZAT6                  <---------ZAT2   <-----------HVH21  <---------GLK1(2)    ----------->GT1 <---------TOE1(3)          <---------At4g35610*TSS ----------- --------------------WRI1   ---------->DOF2                       --------->At4g35610<---------WRKY12   gacagattcgtccaaagaaagagtagagagaaaagagagttaaggttgaagatgagagagaaaatgagagctggagatgagaaacggtcagagaggagaa  19920200                                    ---------->DOF2                                <------ZmHOX2a(1)                            ---------->DOF2                        <---------ANAC55(2)                        <---------ANAC46                       <---------LBD16                  --------->ANAC58                       <-----------------------TaNAC69(2)  ---------->DOF2                      --------->MYB52(1)                --------->ANAC58 >>>>>>>>>TBF1       ----------->HVH21                 --------->DAG2              <------------CBF < >>>>>>TBF1   ----------->GT1  <----------ID1         ---------->DOF2          <-------TEIL    ------ ------------->ANAC81----------->TGA1           ----------->GT1      <------------CBF         -------   gaagaagaagagagtaatgtgaaatgacggaaaaggacaaaagacagagagagtaaaaaagcaaagacgagcattgggagattcaaattgagttttccta  19920300                                                                       ---------->DOF2                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                    --------->LBD16                                         <----------DOF2           <---------ANAC46                                     <---------RAP2.6(2)          <-------TEIL        ---------->DOF2           <---------MYB52(1)      ------>ZmHOX2a(2)     <----------DOF2             <-------GAMYB           <------ZmHOX2a(2)   <---------------AGL15        <---------MYB46(3)      <---------ARR11(3)   --------------->AGL15    --------->DEAR3(1)          --------->ARR14(3) -----------GT1            --------->DEAR3(2)           --------->ARR11(3)                        --- >ZmHOX2a(1)         XXXXXXXXXXXXXXXXXXXXXXX>MIR404    --------->GLK1(1)                          --- -->TOE2(3)  ---------->DOF2--------->MYB46(3)         <---------GLK1(1) --------->DAG2      <-------   aaataccctttaaagcaaaggctattgacaccggccgttgcgactttgtttagggagagatctcgagatgcgcgaaaggtgtttttggtcattttctaat  19920400                                                                                                 ----                                                          --------->ALFIN1                       <---                                                       --------->DAG2                            <---                            <---------AHL20(2)        ---------->DOF2                            ----                     <------MYB83                 ----------->GT1                              ------                     <------MYB46(1)              <---------ANAC55(2)                    <---------ANAC46                     ----------->GT1            <-----------RAV1(2)       <----------DOF2<---------ANAC58                    <---------MYB46(3)       --------->GLK1(1)           <---------ANAC58<---------ANAC58                   --------->ALFIN1          <---------GLK1(1)           <---------ANAC58<---------ANAC55(2)                 <---------ANAC58            --------->CCA1(2)      <---------WOX13(1)   --------->ANAC55(2) ------>ANAC58   <---------ANAC58           --------->ARR11(3)    --------->ATHB12      <---------LBD16 ------>ANAC58   <---------ANAC46           <---------ARR11(3) <-------GAMYB     <---------MYB52(1) --YAB1     ------->TEIL   <---------YAB1 <---------TOE2(3)    <---------At4g35610     <-----------GT1   aggcaatatgtatggacttgggtgggtttattaatgggccaactaagatatcaggtaaaagtgtgagttgattgggcttatctgttttgttacgggctca  19920500                                       <---------ANAC58                                   --------->MYB52(1)                                       <---------ANAC46                       <----------DOF2                                       <---------ANAC58                    --------->ARR14(2)        ===========================================================MADS_MADS ------>ZmHOX2a(2)        <---------WOX13(1)      <------MYB46(1)                            <---------ARR11(3)        <---------------AGL15   <------MYB83          <----------DOF2      <---------AGP1<---------SPL7 ----->ZAT2                    <---------MYB46(3)  <---------------AGL15   --------->ARR11(3) ------At4g35610           <---------YAB1          --------------->AGL15   <---------ARR14(2) ------ZAT2  ---------->DOF2 <---------MYB52(1)<----------DOF2            <---------CCA1(2)<---------LBD16 ----->At4g35610        --------->ARR14(2)    --------->HSFB2a(1)  --------->DAG2      --------->At4g35610 ---->CDC5--------->YAB1<---------ARR14(2)    <---------HSFB2a(1) ---------->DOF2      <---------At4g35610   gctcgatttgattaataaagaaacaggttccgattggtgaggcttgggactttcttcttttagagaaaaaaagtttggatcttttgttcatcttacggac  19920600                                                     <-----------TGA1                                                     <-----------HVH21                                                    =======================================bZIP_DOF                                                    --------->ANAC55(2)                                                    --------->bZIP60(1)                                                    --------->ANAC55(1)                                                    <---------TGA1a                                                    --------->ANAC58                                                    --------->TGA1a                                                    --------->ANAC46                                                    --------->ANAC58                                                    <---------O2  <---------TOE2(3)                                                    --------->bZIP60(2)                                  --------->AHL20(2)<---------bZIP60(1)           ------------------------>ANAC81          --------->O2  --------->DAG2---------->DOF2           --------->GLK1(2)  --------->AHL20(2)    <---------ANAC55(2)   ----------->GT1 -----------          <---------GLK1(2)----------->GT1       <---------REM1(2)<---------AtMYB61       <----------ID1      ---------->DOF2     ----------->GT1    <---------ARR11(3)   <---------TOE1(3) -----------------   aattgctgaaaagaatctaaaaaacaagaagataaaatatatgtctagctcttcacgtcataggcgttaaggtggaatgcaaaaatgccaaaacgaaaaa  19920700  Previous    Next  AGI:  At1g53380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14870.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14870.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14870.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN72546.1); contains InterPro domain Protein of unknown function DUF641, plant (InterPro:IPR006943) Range:  from: 19916744    to: 19920185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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