Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------DAG2         <----------DOF2   <------ZmHOX2a(1) ------AHL20(2)                       <---------GLK1(2) ---->AHL20(2)               ----------->RAV1(1) ---->AHL20(1)              <----------ID1                               ------->TEIL -----AHL20(2)          ------>ZmHOX2a(1)    <---------YAB1        <---------ATHB51         --------- -----AHL20(1)      ---------->ID1---------->DOF2                  <---------AHL20(2)    <---------ZAT18   tattaggagtactttttgttttgttcctaaacaacaaaaagattgttatgagtttaagcctatgtgtaaattatggaccttgatgtactattgcacacag  19809700                                      --------->bZIP60(1)<---------ARR14(2)                                   <---------ATHB12      --------->ARR14(2)                               --------->MYB46(3)        <---------ARR11(3)                   ------>ZmHOX2a(1)--------->YAB1       --------->ARR11(3)                   --------------->AGL15             ---------->DOF2                   <---------------AGL15        --------->At5g28300                  --------------->AGL15     <---------ICU4 ------>ZmHOX2a(2)                  <-----------------AGL2    --------->YAB1<------ZmHOX2a(2)         <---------ICU4       --------->ANAC58 ----------->GT1         ---------->DOF2      --------->ANAC58<---------YAB1  <---------AHL20(2)         --------->YAB1---------->DOF2<---------bZIP60(1)<---------AGP1                             -  --------->ANAC58<-----------------AGL3   --------->ICU4--------->ARR14(3)                         <  --------->ANAC58<-----------------AGL1 --------->YAB1 --------->RVE1(1)                         --- >ANAC46<---------ATHB12  --------->ANAC46 <---------YAB1<---------ARR14(3)                     -----   tggcaggccaataaagacttcctcttaaaggcaaccaatgatatcatcatggtaaaaaagatcttaaatttgaaacaaattttcagattgaacttcaaac  19809800                                               <---------ANAC58                                               <---------ANAC46                                          <---------ICU4                                          <---------AHL20(2)                                          --------->ATHB51                                          -------->ATHB1                                          <--------HAHB4       =================HOX2a_HOX2a       --------->AHL20(2)       <------ZmHOX2a(1)        <-----------GT1<---------ANAC58   --------->TOE1(2)       --------->YAB1<---------ATHB51 -------->ZAT14   <----------DOF2        --------->ICU4 ---------ZAT14  ------>ZmHOX2a(2)       <---------ATHB12                                <---------ANAC55(2) ------>ANAC46 <---------ARR11(3)      --------->WOX13(1)                --------->YAB1  --------->ANAC55(2) ---->ZAT6     --------->ARR11(3) <---------YAB1    ------->TEIL       <---------TOE2(3)<---------ICU4   actaaactaggaaaactgatctttagttttcatattactatcaattatttcttgaatctaaatcaaacaaactaatgaaaatgtttttaatacttatcta  19809900                                                                         --------->ICU4                                    <---------AHL20(2)                 ------->TEIL                                   <---------YAB1                   --------->AtLEC2                <                             <---------AHL20(2)             --------->ANAC46                 <-------TEIL                           <----------DOF2     --------->ZAT2    --------->ICU4            --------->TOE1(2)                 <----------DOF2 <---------ICU4--------->At4g35610<---------ICU4         ------------             <----------DOF2 --------->AHL20(2)<---------At4g35610--------->YAB1         ------------       <----------DOF2     --------->TOE2(3)   <---------ZAT2    <---------ATHB12   <----------------   tgtaaatctctttttctttctttcccaaactttaatttttatttttctgagctagcacatcaacgtaatcatgcacttattccaccagagaaacgtacaa  19810000                                                                                         *TSS        --------->PCF5               <-----------GT1                                    <---------ANAC58     --------->ALFIN1       <-----------GT1                   --------->YAB1            <---------ANAC58 <<<<<<<<<<<<<<<<LFY   <-----------GT1     ------------>CBF  <---------YAB1         <------------CBF --->AtSPL8          <----------DOF2<-----------GT1         --------->ARR11(3)     <---------ICU4 --->AtSPL3       ------>NtERF2<---------DAG2               <---------ARR11(3)------>ZmHOX2a(1) -----WRI1       --------->LBD16<----------DOF2        ------------>CBF      --------->TOE2(3)-------   gaacacagtggtccatctcccgactttacttcaccttttaaacccttcaatttcgtcaacaatatcatcaagtcccattcctcaaacattgcttaaccta  19810100                          <----------DOF2                  ------->GAMYB                 --------->MYB46(3)                                  ----------->GT1                 <---------MYB111(2)                            <------ZmHOX2a(1)                 <---------MYB55(2)                      ==============HOX2a_HOX2a                 <---------MYB52(2)                      <------ZmHOX2a(2)            ------>ZmHOX2a(1)                           --------->ARR11(3)    <-----------GT1 >>>>>>>>>>MYB80                     <---------ARR11(3)<---------ANAC55(2)    ---- -------->AGL15----------->RAV1(1)            <---------ANAC46 <----------ID1   ---------->DOF2  <---   ttagagtttccttcctccaacaaaccatctttataagactccaaaatggagggtaagagatcacaaggacaaggttacatgaaaaagaagtcttaccttg  19810200                                                                                                   <-                                                                                                  ---                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                           <-------GAMYB                                                                                          --------->MYB52(2)                                             <------MYB46(1)                              <---------MYB46(3)       --------->CCA1(2)                     <------MYB83                               <---------ANAC58      --------->ARR11(1)                   <--------P                                   <---------ANAC46      --------->ARR11(3)                 <------MYB46(1)                                <---------ANAC58      <---------ARR14(2)                 <------MYB83                           --------->YAB1<------      <---------ARR11(3)                --------->MYB111(1)                    <---------ATHB12<-----      --------->ARR14(2)                --------->MYB46(2)                   --------->WOX13(1)<-----    ----------->ARR10<---------ANAC55(2)--------->MYB59         <---------HSFB2a(2)    <------NtERF2 ----->HSFB2a(2)     --------->ANAC55(2)--------->MYB111(2)     --------->HSFB2a(2)   <---------MYB46(3) ------HSFB2a(2)    <---------LBD16<------ZmHOX2a(1)<---------ZAT6 <---------ZAT6 --------->ALFIN1<--   tggaagaagatatggagactgatacggatgaagaagaggaagtaggtagggatagagttagagggtctagaggtagcatcaatcgtggtggctcgttgcg  19810300 ---------DOF2 ------>ARR14(2) ----ANAC58 ----RAP2.6(2)                 ---------->DOF2 ----RAP2.3(2)        --------->At4g35610 ---LBD16             <---------At4g35610                    ---------->DOF2 ----ANAC46           --------->ZAT2                 --------->LBD16          --------->AtLEC2 ----ANAC58           <---------ZAT2----------->GT1<---------LBD16         <-------TEIL <---------At4g35610 -------ARR14(2) <-------TEIL<---------YAB1    <-----------HVH21 --------->ALFIN1---------->DOF2 <---   gctttgccaagtagatagatgcacagctgatatgaaagaggcaaaactgtatcaccggagacacaaagtgtgtgaagttcatgcaaaggcatcttctgtc  19810400                                                <-------TEIL                                                --------->SPL7                                             <---------ANAC58                                             <---------ANAC46                                             <---------ANAC58                                            --------------->AtSPL3                                            <---------------AtSPL8                                            --------------->AtSPL8                             ------                     <----------DOF2       <---------DOF5.7(2)                         ------>ZmHOX2a(2)                 ------>MYB46(1)           --------->MYB52(1)                        --------->ARR14(2)                 ------>MYB83           <---------ANAC55(2)                          <---------ARR11(3)                --------->MYB52(1)      <------MYB46(1)     <---------At5g28300      --------->ARR11(3)               ------->GAMYB            <------MYB83   ------>MYB46(1)               <---------AGP1               --------->AtMYB61       --------->MYB59 ------>MYB83                  <---------ARR14(2)              <---------MYB52(2)      <---------MYB55(1)   <-----------GT1          <---------CCA1(2)       <------ZmHOX2a(1)          --------->ZAT14    <---------MYB59      <----------DOF2   <-------- -------DOF2  --------->MYB46(3)  <---------ZAT14    --------->TOE2(3)    <---------DAG2<----------DOF2   tttctctcaggacttaaccaacgcttttgtcaacaatgcagtaggtaacgtacaacctaatttacccttcaaaaaactttttgtctggatctttgaatgg  19810500                                                                          <---------ZAT2                                                                          --------->At4g35610                                                                          <---------At4g35610                                                                          --------->ZAT2                                                                       <----------DOF2                                                                      <----------CDC5                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                  <---------ATERF1(1)                                                                 <---------DEAR3(1)                                                                 --------->ALFIN1                                                                --------->ATERF1(1)       --------->ARR11(3)                      <---------At4g35610<---------DEAR4(2) ----->GT1                                    ------->TEIL      <------ZmHOX2a(1) -AtLEC2               --------->YAB1      <---------REM1(1) <-----------RAV1(2)   tttttttgagttcttgaaacaggtttcatgacctccaagagtttgatgaagctaagagaagttgcaggaggcgcttagctggacacaatgagcgaagaag  19810600  Previous    Next  AGI:  At1g53160.1    Description:  SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding / transcription factor. Identical to Squamosa promoter-binding-like protein 4 (SPL4) [Arabidopsis Thaliana] (GB:Q9S7A9;GB:Q9SMX8); similar to SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G15270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69773.1); contains InterPro domain Squamosa promoter-binding protein (InterPro:IPR017238); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333) Range:  from: 19810089    to: 19810969    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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