Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <-----------GT1     --------->MYB52(1) --------->AGL15 ----------AGL15 -----------AGL1 ---------->AG                                                            --------->ATHB12 ---------->AGL3                                                         <---------AHL20(1) -----------AGL3           <---------------AGL15                         --------->AHL20(2) -----------AGL2     ----------------------->TaNAC69(2)                  <---------AHL20(2) ---------->AGL2   --------->ICU4                                <---------ANAC46     <------ZmHOX2a(1) -----------AG   <---------ICU4                                 <---------AtMYB61   --------->MYB59 ---------->AGL1 --------->YAB1              ----------->GT1 <----------DOF2   <---------YAB1     <-- ---GT1<------------MYB.PH3(1)       <-----------GT1   --------->ANAC46  --------->AHL20(1)    ------   attttagtaaccgattgaataatggttaacttaactaagtaactatgtgataaatacaaacaactttaggtggaatttattgcgattaggaaaccaattt  19793500                                  <<<<<<<ZML2                               --------->HSFB2a(2)                               <---------HSFB2a(2)                         --------------->AtSPL8                       --------->YAB1                       -------->ATHB1                           ------------>AtMYB77  --------->WOX13(1)                       <--------ATHB1                        --------->ANAC46        <---------AHL20(2)                       <---------ICU4                     <---------ARR14(2)         --------->AHL20(2)                       --------->ATHB51                   --------->ARR14(2)  <<<<<<<GRF7                      <---------YAB1              --------->MYB59   <-------GAMYB   --------->AHL20(2)   <---------MYB52(1) --------->ICU4  --------->ANAC58    --------->REM1(2) ----------->HVH21    ---- ---------GT1         <---------ATHB51--------->ANAC58 <---------ANAC46 <-----------GT1     <-------- --->AHL20(2)         <---------ATHB12--------->ANAC46<-------TEIL  --------->At5g28300 <---------ATHB12   tttctgttttgttttgaatttgcaataattgtactagaacaagtcatatagtaaggtccgtataggccacggttatacctgacaaaattaatcaataaat  19793600             <---------ANAC46             <---------ANAC58       <---------YAB1                      --------->AHL20(2)      <---------AHL20(1)    --------->GLK1(2)      <---------AHL20(2)    <---------ARR11(3)    <---------YAB1          --------->ARR11(3)    <---------AHL20(2)     --------->CCA1(1)           >>>>>>>>>>>>>>>>>LFY  <---------ICU4           --------->RVE1(1)         <---------ATHB12        --------->ATHB12 --------->ICU4  --------->HSFB2a(2)     --------->ANAC58         --------->ICU4 ----->TOE2(3)   <---------HSFB2a(2)     --------->ANAC58       --------->WOX13(1) -ATHB12     <---------ANAC58      ----------->RAV1(1) <<<<<<<<<<<<<<<<<LFY <---------YAB1          <   ctaaatattatttttgcttatagaacaaaaaatcttccaacacaagaaaataccaatgaccaatggcaattagtagttttgattagttcagattaacaca  19793700                             <---------MYB111(2)                             <---------MYB111(1)                             --------->AtMYB61                                                  <----                             <---------MYB46(2)                                             ---------                             <---------MYB59                                               --------->AHL20(2)                             --------->MYB46(3)                                            <---------AHL20(2)                           -------->P                                                   --------->AHL20(2)                         <---------MYB111(1)                                            <---------AHL20(2)                         <---------MYB46(2)                                            --------->AHL20(2)               --------->TOE2(3)                                                    <---------AHL20(2)               --------->TOE1(3)                                                    --------->AHL20(2)            <---------WRKY18(1)------>MYB46(1)                                     --------->AHL20(2)           --------->WRKY12------>MYB83                       --------->YAB1    --------->AHL20(2)           --------->WRKY38(1) ------>MYB83                   -------->HAHB4    --------->AHL20(1)         <-------GAMYB<------ZmHOX2a(1)                      <---------YAB1     <---------AHL20(2)        <---------MYB46(3) ------>MYB46(1)                 --------->YAB1       <---------AHL20(1)       >>>>>>>>>>>>WRKY18<---------MYB59    <---------ZAT6<---------YAB1       --------->AHL20(2) ---------GLK1(2) ---------->DOF2  ---------->DOF2 --------->YAB1    <---------YAB1<---------AHL20(2)   tagaatttgactgttgaccttaaaggacctaccaaaccaaagactagagtcaataagagtataataatagtatgtttagaaataaattaataaataattt  19793800                                                                                                    <                                         --------->TOE2(3)                                         <-                                        --------->YAB1                                             <-                                   --------->ANAC46       --------->ANAC58                         <-                                   --------->ANAC58       --------->ANAC58                  ------>ZmHOX2a(1)                        --------->HSFB2a(2)  <------------CBF                        <----------DOF2- -------GT1             <---------HSFB2a(2)--------->AHL20(2)              <----------DOF2  ========= >AHL20(2) <----------ID1          --------->ANAC58      *TSS         <---------ARR11(3)   --------->TOE2(3)   tccataccaaaaaaaaacaaaaacttcaagaagaaacaagaaacataaattgaaatgtgaacgcatgaacaagaactctttaatcttctttttcctcagt  19793900                                                    <---------AGP1                                                    --------->ARR14(2)                                                    --------->AGP1                                                    <---------ARR11(3)           <------ZmHOX2a(2)                        <---------ARR14(2) ---------------AGL15                           ---------->DOF2    <<<<<<<<<TBF1 ----------------AGL3                     <---------GLK1(1)    <-----------GT1 ----------------AGL2                   --------->ATHB12 <---------MYB52(1)                     <---- ----------------AGL1                <---------ANAC58 ------>ZmHOX2a(2)               <---------YAB1 -------------->AGL15                <---------ANAC58<------ZmHOX2a(2)               <-----------GT1 =================HOX2a_HOX2a     <----------DOF2   --------->ARR11(3)       ----------->GT1 <-------   ttcttcttatgggatcaacaaaaacttgtcttccctctttcttgatttctcaaagatctgttttttttcttcttcatatttgtaaattttcattttttcc  19794000                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   <-----------ARR10                                                   --------->ARR14(3)                                                   --------->ARR14(2)                                                   <---------ARR11(3)             <---------ANAC58                                                   <---------ARR14(3)             <---------ANAC46                        --------->At4g35610        <---------ARR14(2)      <---------ANAC58             <----------DOF2                       --------->ARR11(3)      <---------ANAC58          --------->ARR14(2)            --------->GLK1(2)              <----------DOF2          --------->ARR11(3)           <---------GLK1(2)              =============================HOX2a_HOX2a          <---------ARR11(3)           <---------ARR11(3)             ------>ZmHOX2a(2)          <---------ARR14(2)           <---------ARR14(2)           --------->ARR11(3)           ----          <---------AGP1<---------At4g35610      ----------->ARR10  <---------ARR11(3)           ---- -----ANAC46------>ZmHOX2a(2)          --------->ARR14(2)      <---------ARR11(3) <---------ANAC58  - ----GT1 <---------CCA1(2)             --------->ARR11(3)  ---------->DOF2 <---------ANAC46 <------ZmHOX2a(1)   gtttaaaaattggatcttttttcttcagctaaaaccctgaagattcttgggaagatcttcttaaaggtctgatctttgggtgtttcttggagcaggacca  19794100     <---------ANAC58    ------>NtERF2     <---------ANAC46   <---------ANAC46     <---------ANAC58   <---------RAP2.6(2)                                                   <------ZmHOX2a(1)    --------->ZAT18    --------->RAP2.6(3)                 --------->AHL20(2)      --------->WRKY38(1) <---------ANAC58    ----------->HVH21              --------->LBD16               --------->At5g28300 <---------ANAC58   <-----------HVH21<---------ANAC58      <---------AHL20(2)   <---------DEAR3(1) <- -->MYB83      <---------At5g28300   <---------ANAC58--------->LBD16      --------->YAB1  --------->DEAR3(1) -->MYB46(1)  <-----------GT1       <-------TEIL  <---------LBD16       ------->TEIL  --------->MYB46(3) -------->ATHB12   --------->ALFIN1--------->ALFIN1<---------LBD16   <---------YAB1----------->HVH21   aatgagtgcgtcgatattactgtgtgacggcttcgatgtgcgtcgaattctaaccgggaaattaaacggtgatgaatcatcgacggtgaccaccgaggaa  19794200                                         <---------ARR11(3)                              <---------ANAC58                              <---------ANAC46      <---------ZAT2          --------->ALFIN1      <---------At4g35610     <---------ANAC58      --------->ZAT2----------->HVH21    --------->ARR11(3)     --------->ANAC58             --------      --------->At4g35610  <---------AtMYB61                    --------->ANAC58      --------->LBD16     ------->TEIL --------->LBD16--------->REM1(2)       --------------->AGL15  ----------->HVH21     --------->GLK1(2)     --------->ALFIN1  <-----------GT1 <---------MYB52(1) --------->WRKY12 ---------ID1   <---------LBD16 --------->ALFIN1      <-----------GT1           --------->WRKY38(1) -   gacgacgaagctgtgttttccggtgaagagtggtgtggagagagttcttactgtttttacttcgttaagcaattcgcttacgatgaccctgagattaaag  19794300                             --------->YAB1                             --------->ATHB12                 <---------ICU4                   <-----------GT1                  --------->ANAC58           --------->At4g35610                 <---------ARR14(2)                <--------P           <---------At4g35610                 <---------GLK1(2)           ---------->DOF2       <---------REM1(1)     <---------ICU4    --------->ARR14(2)    <---------GLK1(1)   <---------WOX13(1)       <---------YAB1--------->MYB52(1)         --------->GLK1(1) <----------DOF2 -->DOF2  ------->TEIL----------->GT1   ----------->HVH21        <---------WOX13(1)--------->ANAC58 -------->ICU4   --------->YAB1      --------->ZAT6        --------->MYB52(1)--------->DAG2   ccaagattgatgaagctgatcatgaggtttatcattgtaacactgaccggattcacattgctaacagattgaaatccaaaagggtaagccttttttggtt  19794400  Previous    Next  AGI:  At1g53110.1    Description:  chorismate mutase. similar to PPI2 (PROTON PUMP INTERACTOR 2) [Arabidopsis thaliana] (TAIR:AT3G15340.1); similar to PPI2 (PROTON PUMP INTERACTOR 2) [Arabidopsis thaliana] (TAIR:AT3G15340.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN81802.1); contains InterPro domain Chorismate mutase; (InterPro:IPR002701) Range:  from: 19793857    to: 19796157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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