Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ---->ZAT2 ---->MYB46(3)                                        ------>MYB83 -----ZAT2                                            ------>MYB46(1) >MYB83                                             <---------MYB111(1) >MYB46(1)                                    --------->ZAT6 -->P                             --------->ANAC46  --------->MYB46(3) --->MYB52(1)                     --------->ANAC58  <---------MYB59 ---ALFIN1               <----------DOF2      --------------->AtSPL8                           ------ ->MYB46(3)            ---------->ID1         --------------->AtSPL3                  --------->ATHB12 --MYB55(2)        <----------DOF2--------->ANAC58  --------->AtMYB61  --------->ANAC58       <------ >DEAR3(2)    ------->TEIL      --------->MYB52(1)  <---------MYB46(2) --------->ANAC58       -------   cagcgaagaagctatgaaactctttgtctttcacaaacgaaaccatgaacagtaccaaaccaattgcaaacagaagcaaaccagagaatgactgagaaat  19765800                              <----------DOF2                                                     <--                              ------>ZmHOX2a(1)        ----------->RAV1(2)                        <--                            ------>ZmHOX2a(2)--------->WOX13(1)                              <-------                            ====================================HOX2a_HOX2a         <---------ZAT14                     <---------ANAC46     --------->ANAC58                     --------------->AGL15 --->GLK1(2)       <---------ANAC46       --------->ANAC58        --------->ATHB12  --------->REM1(2) ---GLK1(1)       --------->ALFIN1      <---------ANAC58         <---------ATHB12   --------->ZAT14 -->GLK1(1)       <---------AtMYB61     <---------ANAC58 ------>ZmHOX2a(1) <----------DOF2  <--------   ctgtatgagtagttcatcgtgtggtgttgatccttttagtttgctagcaatctcacttcctggtccaaagattgaagctttctctgtgtagaacatcatt  19765900    --------->ZAT6               <---------ZAT14 --------->ARR14(2)              --------->ARR14(2)                                          <------- <---------ARR14(2)              --------->ZAT14                                             XXXXXXXX -------TOE1(3)     --------->YAB1                                                    <---------YAB1 -------TOE2(3)     --------->ATHB51         --------->ANAC46                       --------->YAB1 --ICU4            --------->ICU4<---------ARR14(2)          <-------TEIL       --------->ATHB12 -YAB1        --------->ANAC46<---------ANAC46     ---------->DOF2         --------->ZAT14 ----------   aaggttccactagtaagcgcaattatcgaatggagtatacagattactcgaaacaaagatggattcatcgatattgctgtagtcattgatgaataaagga  19766000                                                          ---------->DOF2                                                     <------ZmHOX2a(1)                                               ------>ZmHOX2a(2)                                               =============HOX2a_HOX2a                                              <------ZmHOX2a(2)                                              ==============HOX2a_HOX2a                                              <---------RVE1(1)                 ------->TEIL                --------->ARR11(3)                 <---------ARR14(2)          <---------ARR14(2)                 --------->ARR14(2)          --------->ARR14(2)                <---------CCA1(2)            <---------ARR11(3)             ------->TEIL                    <---------AGP1                      <----------DOF2          <---------ANAC46                   <---------ARR14(3)              <---------ANAC55(2)   <----------DOF2                           --------->ARR14(3)              --------->ANAC55(2) --TOE2(3)<---------ANAC55(2)       ---------->DOF2  ============================HOX2a_HOX2a       -- XXXXXXXXXXXX>MIR866-5P        --------->TOE2(3)<----------DOF2             <---------LBD16        -- >DOF2    <---------YAB1  --------->AtMYB61----------->ARR10--------->DAG2<------ZmHOX2a(2)      ----   agagactttgttatgtatgtatctgaaaccaaaacttaaaaagagaagatctttaggagaaaaaggcaagttttggatcacgggtttattgtggaaatgg  19766100              <-----------------AGL2              <-----------------AG              <-----------------AGL1              ----------------->AGL1             <-----------------AGL1        <---------ARR11(3)     --------->ICU4        --------->ARR11(3)--------->ANAC58                                                     <-----     <------ZmHOX2a(1)    --------->ANAC58        --------->DAG2 <----------DOF2               ------ --------->TOE1(2)      ---------->DOF2         ---------->DOF2 <---------ANAC58    ------>ZmHOX2a(2) ------->ANAC58--------------->AGL15 --------->ANAC58     ------->TEIL            <---------ARR11(3) ------->ANAC58<---------------AGL15 --------->ANAC58--------->CCA1(2)        <---------At4g35610 ------>DOF2<-----------GT1    <---------ATHB12<------ZmHOX2a(1)<---------ANAC58  --------->ARR11(3)   aaagctaggagattttactagtttgggaaagcaatgaagaagccatggaggaaaggtatggacttggcttttgggaagagagatgatctcatttagggat  19766200                                 --------->AHL20(2)                                        <---------        <---------WOX13(1)     <----------DOF2                                      <-----------HVH21     <---------YAB1         <---------ARR11(3)       --------->YAB1            <-----------RAV1(1)   <----------DOF2  <---------YAB1                  <---------YAB1            <---------TOE2(3) ----ARR14(2)      *TSS     --------->ARR11(3)--------->DAG2    <---------TOE2(3)   <---------PCF2 --->ARR14(2)      <---------ARR11(3)        ---------->DOF2    <---------TOE1(3)--------->ALFIN1   ttggactttgatagattccatgatttttgagttcttttaatatactataaagttatgaaaatttgtaaggtttttggtttaatgtgggtcactcttttgg  19766300                                                                          <---------YAB1                                                                        --------->YAB1                                                                        <---------ICU4                                                                        -------->HAHB4                                                                <---------AHL20(1)                                                                <---------AHL20(2)                                                           --------->AHL20(2)                                                   <-------PIF5 --------->AHL20(2)                                                   <-----------HVH21   --------->ICU4                                                   ------->PIF5<---------AHL20(2)                    ------>ZmHOX2a(1)             <---------TGA1a    <---------ICU4                <-----------GT1                   --------->ANAC58  <---------AHL20(2)             <---------YAB1                       --------->ANAC46 <---------AHL20(2)            <---------AHL20(1)                    --------->ANAC58--------->YAB1            <---------AHL20(2)                    --------->O2 --------->AHL20(2)          <---------YAB1  ==================================bZIP_DOF--------->AHL20(2)             <-        <---------ICU4    ---------->DOF2         <---------O2 --------->YAB1                  ------        <--------HAHB4--------->HSFC1(1)          --------->bZIP60(2)--------->YAB1           -------       <---------YAB1 --------->HSFB2a(2)         --------->TGA1a<---------YAB1  --------->YAB1<----- -DOF2 --------->ICU4 <---------HSFB2a(2)       <---------ALFIN1--------->AHL20(1)       ----------->GT1   acaaatttcattattatttttcctctagaaaagctagacaatttcaatccccacgtcccaactaattatattaattatgctaataagaatttagtaattt  19766400                                                   --------->YAB1                                                  --------->AHL20(2)                                                 <---------YAB1                                                --------->TOE2(3)                      --------->TOE2(3)                                               --------->ATHB12                  <---------AHL20(1)                                               <--------HAHB4                    <---------AHL20(2)                                               --------->YAB1                    --------->AHL20(1)                                               -------->ATHB1                    --------->AHL20(2)                                               <---------ICU4                   <---------AHL20(2)                                              --------->ICU4                    --------->AHL20(2)                                              <---------ATHB12         <---------AHL20(1)  <---------TOE2(3) ----------GT1       --------->YAB1  --------->ATHB12             --------->AHL20(2) <-------TEIL --->AHL20(2)       <---------YAB1  --------->AHL20(2)    <-----------GT1   <---------AHL20(2)  <---- -->ICU4 <-------GAMYB              <---------AHL20(2)--------->YAB1   --------->AHL20(1) ---------->DOF2 ----AHL20(2)      --------->AHL20(2)<---------AHL20(2) --------->AHL20(2)  --------->AHL20(2) ------   tttacatatagggttgcaaatttttataatctatactattaattgggaatcattaaaaataaacaatttttaatatttttaaataaattcattaaagata  19766500                                --------->AHL20(2)         <---------ICU4                  <---------                             --------->YAB1               --------->ICU4             <----------DOF2-                            <---------AHL20(2)           --------->ANAC55(2)         <---------DAG2 -       --------->YAB1   <---------AHL20(2)               <---------ANAC55(2)      <-----------GT1   <    <---------ICU4      --------->AHL20(2)  <---------ARR14(2)               --------->AHL20(2)     < --------->YAB1--------->AHL20(2)           --------->ARR11(3)               <---------AHL20(2)    -- ---TEIL       <---------AHL20(2)           <---------ARR11(3)              --------->AHL20(2)  ----- --->CCA1(2)  --------->AHL20(2)--------->YAB1 <----------DOF2              <---------AHL20(2) ------   caatagtaatcacaaaattaatagatttaaataataaaaaatggaatatctttttgaatacttattagttttccaaaattaaattcactttctctttcct  19766600          --------->ANAC58   <---------ATHB51   <---------AHL20(2)            --------->AHL20(2)                               --------->YAB1 -DOF2    --------->ANAC58    --------->TOE2(3)                                   --------->AHL20(2) -------->AHL20(1)       <---------AHL20(2)                                       <---------AHL20(2) -------->AHL20(2)      <---------AHL20(2)                                       <---------ATHB12  -- ---------AHL20(2)      --------->AHL20(2)                                --------->GLK1(1)  <xxxxxxx ---------AHL20(1)      <---------AHL20(1)                           --------->CCA1(2)    <---------ZAT14 ------->AHL20(2)       --------->AHL20(1)        --------->YAB1  ----------->ARR10       --------->ZAT14 ->ZmHOX2a(1)     <---------AHL20(2)         --------->MYB46(3)   <---------TOE2(3)   <-----------GT1 --------->AGL15 --------->AHL20(2)   --------->AHL20(1)----------->GT1   <---------GLK1(1)  <xxxxxxx   attaaattatggacgaaaatttaaaatttatttcttaaaatatgttaaccaataagaattgaaaaactaagatttgatatccaattatatactatactag  19766700  Previous    Next  AGI:  At1g53035.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15358.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69750.1) Range:  from: 19765368    to: 19766219    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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