Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ANAC58                                    <---------ANAC58                                    <---------ANAC46      --------->CCA1(2)                              <---------ANAC46           <---------ARR14(2)                             <---------LBD16             <---------ARR11(3)                             <---------At4g35610         --------->ARR11(3)                          --------->At4g35610         <------ZmHOX2a(1)           --------------->AtSPL8<---------ARR14(2)   =======================HOX2a_HOX2a      <---------ANAC58 <---------At4g35610     <------------ATHB5      <---------ANAC58 --------->At4g35610     --------->ATHB12 <------ZmHOX2a(1)     <---------ZAT2         --------->ICU4 -----ANAC58           --------->ZAT2  --------->SPL7--------->LBD16 -----ANAC58      --------->ANAC46 <-------TEIL<--------ATHB1                    <---------WRKY18(1) -----ANAC46 <---------SPL7<-----------RAV1(2)<---------ATHB12       --------->GLK1(1)             -- --RAV1(1) --------------->AtSPL3--------->ARR14(2)<-----------RAV1(2)------>ZmHOX2a(2)<---------ATHB12   ttaggagttcgtggtcgtactcgtaagctgcagcgggttcgtatgccaatgattcaggagatattggactgatctcttcttcttgaccaatagtttgata  19740700             <------NtERF2                                      --------->ICU4            <---------MYB46(3)                      <---------------AGL15           <---------RAP2.6(2)         <----------DOF2   <---------ANAC58        <---------DOF5.7(2)           <---------ANAC46           <---------ANAC58   <---------ANAC58      --------->DOF5.7(2)        <---------AtMYB61     --------->YAB1        --------------->AGL15     <----------DOF2        --------->ALFIN1     <---------YAB1         <----------DOF2  >>>>>>>>>TBF1<---------TOE2(3) - ------->MYB46(3) --------->YAB1      <---------ANAC58   <---------ANAC46---------->DOF2     <-------   aaccatcgatgtggtggctatgagaaacgttatgagaattgctttctccattttctttttcttgtaatgaagaagaaaagctttaacgaagtagcctttt  19740800                                                                                                -----                                                                                                <----                                                                                                <----                                                                                            ---------                        --------->MYB46(3)                                                  <--------                      --------->MYB52(1)                 <------------CBF                   <--------       --------->AHL20(2)                               <------ZmHOX2a(1)                 <----------       <---------AHL20(2)       <----------DOF2       <---------TOE2(3)          <<<<<<<<<<<<<<<<<<<< ---------->GT1  <---------ANAC46     <---------YAB1---------->DOF2          --------->ICU4 <-------- ---DOF2<---------AHL20(2)      <---------DAG2    <---------YAB1    <---------AHL20(2)   <<<<<<<<<MYB98   aatggtttattaatttgtaacgagtaacgactagctttttatgtttctggtcattaaaggattgtttgatttttttgacatgtttacatatgttacttac  19740900      --------->ATHB51      --------->YAB1      <---------ICU4      <--------HAHB4      -------->HAHB4      <--------ATHB1     <---------YAB1     --------->AHL20(2)     --------->ICU4   --------->YAB1 <---------WOX13(1) ---->ANAC55(2) -----ANAC58 -----ANAC58 >ANAC55(2)                                                                          <---------YAB1 -ANAC58                                                                             --------->ICU4 -ANAC58                                        --------->ANAC46                <---------ZAT6 -GT1<---------ATHB51                           --------->ANAC58           <----------DOF2 <<MYB98                                        --------->ANAC58          <---------ANAC58 -ANAC55(2)   <-----------GT1         <-----------GT1   <-------TEIL      <---------ANAC58   ttgattaataattaagtcacatttcagtttatacacattttttcatgttcacgccaaatgcatagacttagaaggggcttttgtgttataatgggcctat  19741000               <----------ID1                                                  --------->ANAC46          <----------DOF2                              --------->At4g35610     --------->ANAC58     -         <----------DOF2    ---------->DOF2            <---------At4g35610     --------->ANAC58     *TSS         <---------DAG2  <------------CBF    <------ZmHOX2a(1)            <<<<<<<<<TAC1       <<<<<<<   gggcctatgggccttttgggccaaaaccattgaagcccattttaagaggagactcacagcaaaccctagcaaaaacactcgaagccactctgtttcttct  19741100                                        <------ZmHOX2a(1)                                         ---                                      <---------TOE1(3)                                          ----                                      <---------TOE2(3)                                  --------->HSFB2a(2)                                   <---------MYB52(1)                                   <---------ANAC46                                   --------->DOF5.7(2)                             --------->HSFB2a(1)   ------>ZmHOX2a(1)              <-------GAMYB                      <------ZmHOX2a(1)  <---------LBD16 ----->ZmHOX2a(1)            --------->SPL7                ----------->GT1 ---------->DOF2--------->LBD16 <<TBF1    <----------DOF2 <---------SPL7                 ------------------------>ANAC81<---------HSFB2a(2)   tcctcctctgtttctttcttctcttccatcgttcgccgttaaggaaaacaaaaatcagagatggtgaagaaggagaagaaagcgaatgtttccggtaaac  19741200                                  ---------->DOF2                       <---------At4g35610                                ------->GAMYB                    <---------ANAC58                                     <---------LBD16                    <---------ANAC58                <---------LBD16    --------->MYB52(1)                  --------->ARR14(2)        --------->MYB52(1)         <-----------GT1 ------->DOF2     --------->GLK1(2)        --------->AtMYB61 --------->ARR14(2)                    -- ----->AtMYB61    <---------ARR14(2)      --------->MYB46(3) <---------ARR14(2)    <---------------AtSPL8   caaagcattcgctcgatgcgaatcgtgctgatggcaaaaagaaaaccaccgaaacccggtccaaatccacagttaaccggcttaagatgtacaagactag  19741300                                                                   ------->TEIL                                                                --------->ANAC58           <---------ANAC46                                                                --------->ANAC46           <------MYB46(1)                 --------->At5g28300                      ------>MYB46(1)<---------At4g35610                ----------->GT1                           ------>MYB83   --------->At4g35610              <---------MYB52(1)                        <---------MYB59  <---------ZAT2    <------MYB83            <---------DREB2C(2)                         --------->MYB46(3)                <---------AtMYB61            <---------DEAR3(1)                         --------->ANAC46  ----------->RAV1(2)           <---------LBD16                           <-----------GT1    ------->TEIL      <---------MYB46(3)         --------->ANAC58 ------>ZmHOX2a(1)  ---------->DOF2  --------->MYB52(1)          --------->MYB46(2)         --------->ANAC58--------->TOE1(3)  <---------WRKY38(1) --------->ANAC58      <---------MYB46(3) --------->MYB52(1)      --------->TOE2(3)  <---------WRKY12 ------->GAMYB ----------->HVH21 ------->TOE1(2)<---------MYB46(3)        <-----------HVH21 <---------MYB52(2) ------>ZmHOX2a(2)   acctaagagaaacgccggtggtaaaatccttagcaacgagtaccagtcaaaggaattacccaactcacgaatcgcacctgatcgacgatggtttggtgag  19741400               --------->GLK1(2)        <---------ANAC58        <---------ANAC46        <---------ANAC58                                                                  -----------   --------->ARR11(3)                <---------YAB1                                       <---------ANAC46   --------->ARR14(2)    --------->ANAC58                <-------GAMYB           --------->ZAT6   <---------ARR11(3)    --------->ANAC58     --------->At4g35610                <---------ALFIN1   <---------ARR14(2)   --------->WOX13(1)    <---------At4g35610                <---------HSFB2a(1)-   <---------GLK1(2) <-----------HVH21--------->YAB1    <-----------RAV1(1) --------->ANAC46     ----   tttcagattttcgtgagaatttatgtcactcaattgattttcatagtcatctgattttctgttgatgtgttattgtatagggaacactcgtgttgtgaat  19741500                                                                                 <---------ANAC46      <---------ANAC58                             --------->YAB1                <---------ANAC58    <---------ARR11(3)                 <---------ARR11(3)                        <---------ANAC58    --------->ARR11(3)   <---------ARR11(3)        <-----------GT1           --------->HSFC1(2) >GT1 <---------ANAC58   --------->ARR11(3)     <---------ICU4               <---------HSFC1(2) --------->DOF2        ----------->ARR10     ----------->GT1              <------ZmHOX2a(1)    <----- ----->YAB1    <----------DOF2         --------->ARR11(3)            <------ZmHOX2a(1)     <---------   cagaaagagcttgagtactttagagaagagcttcagactaagatgtctagtaattacaatgtgattttgaaggagaggaagttgcctatgtctcttttaa  19741600  Previous    Next  AGI:  At1g52970.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45190.1); contains InterPro domain Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502) Range:  from: 19740302    to: 19740751    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g52980.1    Description:  GTP-binding family protein. similar to GTP-binding family protein [Arabidopsis thaliana] (TAIR:AT3G07050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68109.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39250.1); similar to hypothetical protein OsI_011244 [Oryza sativa (indica cultivar-group)] (GB:EAY90011.1); contains InterPro domain GTP-binding; (InterPro:IPR005289); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain NGP1, N-terminal (InterPro:IPR012971); contains InterPro domain GTP1/OBG; (InterPro:IPR006073) Range:  from: 19741100    to: 19744016    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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