Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                                                           --------->ANAC46                                                                                  <---------GLK1(2)                                        <---------ZAT18                           <---------ARR14(2)                                        --------->ZAT14                           --------->ARR14(2)                                   --------->At4g35610                           <---------HSFC1(2)                                   --------->ZAT2                                <---------HSFB2a(1)                                  ----------->RAV1(1)                         <------ZmHOX2a(1)                                --------->At4g35610                         <---------TOE1(2)                                <---------At4g35610                        ------>ZmHOX2a(1)     <---                            --------->YAB1                                 --------->HSFB2a(2)  -----                            --------->TOE2(3)                              <---------HSFB2a(2)-------                           <---------ATHB12                               --------->TOE1(2)--------->ANAC58                          ------>MYB83 <---------AtMYB61      --------->ARR14(2)----------->ARR10----                  <------ZmHOX2a(1)<---------At4g35610  <-----------GT1   --------------------->WRI1<        ---------->DOF2   ------>MYB46(1)       <---------ALFIN1   <---------MYB52(1)    --------->At4g35610   atcaagtttcaaaagcgagaggagcaccaatcttagcagcagtggtctcaacacatttattccacatccgtttgctcctaggaagaatcgcagaagcaac  19740400                                                                                     ------>ZmHOX2a(1)                                                                                     ================                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                       --------->ZAT18          <----     <---------At4g35610                                               --------->ZAT14          <---- ------ARR11(3)          ---------->DOF2                               <---------ZAT18 --------->ANAC46 ---->REM1(1)    <---------ANAC58                                  --------->DAG2   --------->TOE2(2) ---->RAV1(1) --------->ALFIN1             ----------->HVH21      ---------->DOF2   --------->TOE1(2) ----->ARR11(3)  <---------ANAC58      ------>ZmHOX2a(1)    --------->YAB1--------->ANAC58--------->MYB52(1) ----------DOF2  <---------ANAC46 --------->WOX13(1)       <---------ATHB12    --------->MYB46(3)<---   atcttttagctcataagtggcgaacacaaaagtcatcaatccttcgtgacattctcttccaatcttcaaaaagttcacacaacaatcctccgaaacgggc  19740500                                                                                           <---------bZIP60(2)                                                                                           <---------O2                                                                                           --------->O2                                                                                           <---------                                                                                           --------->TGA1a                                                                                           <---------TGA1a                                                                                       <---------RAP2.6(3)                      <---------At4g35610                                              <-----------HVH21                      --------->At4g35610                                           --------->ARR14(2)         --------->WOX13(1)                                                       --------->LBD16       <------ZmHOX2a(2)                                                          ------>NtERF2 <----       ==============HOX2a_HOX2a                                                  <---------DEAR3(2)   <------NtERF2   <---------MYB52(1)                                            <---------ANAC46 <---------ANAC46 <-----------HVH21               <-----------GT1                --------->DEAR3(1) =============HOX2a_HOX2a   <---------ICU4      <---------AHL20(2)              --------->ATERF1(1) -----ANAC58      <-----------TGA1       <---------At4g35610                    <------NtERF2   <---- -----ANAC58     --------->ANAC55(2)  <---------ANAC58                          <---------LBD16 <---- -------DOF2  ------>ZmHOX2a(1)       <---------ANAC58     --------->GLK1(2)   <---------RAP2.3(1)   ttgtcgtcgatcaatccttccgtcatctcaacattgcatttcgagctcattttatccgaacaatcttggagaaatttgatgcgccgggtcgtcatgtggc  19740600                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58      --------->CCA1(2)                              <---------ANAC46           <---------ARR11(3)                             <---------At4g35610         <---------ARR14(2)                             <---------LBD16             --------->ARR11(3)                          --------->At4g35610         <------ZmHOX2a(1)           --------------->AtSPL3<---------ARR14(2)   =======================HOX2a_HOX2a      <---------ANAC58 --------->ZAT2          --------->ATHB12      <---------ANAC58 <---------At4g35610     <------------ATHB5 <------ZmHOX2a(1)     <---------ZAT2  --------->SPL7--------->LBD16 --RAV1(1) --------------->AtSPL8--------->ARR14(2)<-----------RAV1(2) -----ANAC58           --------->At4g35610    --------->ICU4                     <---------WRKY18(1) -----ANAC46      --------->ANAC46 <-------TEIL<--------ATHB1         ------>ZmHOX2a(2)            -- -----ANAC58 <---------SPL7<-----------RAV1(2)<---------ATHB12       --------->GLK1(1) <---------ATHB12   ttaggagttcgtggtcgtactcgtaagctgcagcgggttcgtatgccaatgattcaggagatattggactgatctcttcttcttgaccaatagtttgata  19740700             <------NtERF2                                      --------->ICU4            <---------MYB46(3)                      <---------------AGL15           <---------ANAC46            <----------DOF2   <---------ANAC46        <---------DOF5.7(2)           <---------RAP2.6(2)        <---------ANAC58   <---------ANAC58      --------->DOF5.7(2)        <---------AtMYB61     --------->YAB1        --------------->AGL15     <----------DOF2        --------->ALFIN1     <---------YAB1         <----------DOF2  >>>>>>>>>TBF1<---------TOE2(3) - ------->MYB46(3) --------->YAB1      <---------ANAC58   <---------ANAC58---------->DOF2     <-------   aaccatcgatgtggtggctatgagaaacgttatgagaattgctttctccattttctttttcttgtaatgaagaagaaaagctttaacgaagtagcctttt  19740800                                                                                                -----                                                                                                <----                                                                                                <----                                                                                            ---------                        --------->MYB46(3)                                                  <--------                      --------->MYB52(1)                 <------------CBF                   <--------       --------->AHL20(2)                               <------ZmHOX2a(1)                 <----------       <---------AHL20(2)       <---------DAG2        <---------TOE2(3)          <<<<<<<<<<<<<<<<<<<< ---------->GT1  <---------ANAC46     <---------YAB1---------->DOF2          --------->ICU4 <-------- ---DOF2<---------AHL20(2)      <----------DOF2   <---------YAB1    <---------AHL20(2)   <<<<<<<<<MYB98   aatggtttattaatttgtaacgagtaacgactagctttttatgtttctggtcattaaaggattgtttgatttttttgacatgtttacatatgttacttac  19740900      <---------ICU4      <--------HAHB4      --------->YAB1      <--------ATHB1      -------->HAHB4      --------->ATHB51     --------->ICU4     <---------YAB1     --------->AHL20(2)   --------->YAB1 <---------WOX13(1) ---->ANAC55(2) -----ANAC58 -----ANAC58 >ANAC55(2)                                                                          --------->ICU4 -ANAC58                                                                             <---------YAB1 -ANAC58                                        --------->ANAC58                <---------ZAT6 -GT1<---------ATHB51                           --------->ANAC58           <----------DOF2 <<MYB98                                        --------->ANAC46          <---------ANAC58 -ANAC55(2)   <-----------GT1         <-----------GT1   <-------TEIL      <---------ANAC58   ttgattaataattaagtcacatttcagtttatacacattttttcatgttcacgccaaatgcatagacttagaaggggcttttgtgttataatgggcctat  19741000               <----------ID1                                                  --------->ANAC46          <----------DOF2                              --------->At4g35610     --------->ANAC58     -         <----------DOF2    ---------->DOF2            <---------At4g35610     --------->ANAC58     *TSS         <---------DAG2  <------------CBF    <------ZmHOX2a(1)            <<<<<<<<<TAC1       <<<<<<<   gggcctatgggccttttgggccaaaaccattgaagcccattttaagaggagactcacagcaaaccctagcaaaaacactcgaagccactctgtttcttct  19741100                                        <------ZmHOX2a(1)                                         ---                                      <---------TOE1(3)                                          ----                                      <---------TOE2(3)                                  <---------HSFB2a(2)                                   --------->DOF5.7(2)                                  <---------LBD16                                   <---------MYB52(1)                              --------->HSFB2a(1)   ------>ZmHOX2a(1)              <-------GAMYB                      <------ZmHOX2a(1)  <---------ANAC46 ----->ZmHOX2a(1)            --------->SPL7                ----------->GT1 ---------->DOF2--------->LBD16 <<TBF1    <----------DOF2 <---------SPL7                 ------------------------>ANAC81--------->HSFB2a(2)   tcctcctctgtttctttcttctcttccatcgttcgccgttaaggaaaacaaaaatcagagatggtgaagaaggagaagaaagcgaatgtttccggtaaac  19741200                                  ---------->DOF2                       <---------At4g35610                                ------->GAMYB                    <---------ANAC58                                     <---------LBD16                    <---------ANAC58                <---------LBD16    <-----------GT1                  --------->ARR14(2)        --------->MYB52(1)         --------->MYB52(1) ------->DOF2     <---------ARR14(2)       --------->AtMYB61 --------->ARR14(2)                    -- ----->AtMYB61    --------->GLK1(2)       --------->MYB46(3) <---------ARR14(2)    <---------------AtSPL8   caaagcattcgctcgatgcgaatcgtgctgatggcaaaaagaaaaccaccgaaacccggtccaaatccacagttaaccggcttaagatgtacaagactag  19741300  Previous    Next  AGI:  At1g52970.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45190.1); contains InterPro domain Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502) Range:  from: 19740302    to: 19740751    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g52980.1    Description:  GTP-binding family protein. similar to GTP-binding family protein [Arabidopsis thaliana] (TAIR:AT3G07050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68109.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39250.1); similar to hypothetical protein OsI_011244 [Oryza sativa (indica cultivar-group)] (GB:EAY90011.1); contains InterPro domain GTP-binding; (InterPro:IPR005289); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain NGP1, N-terminal (InterPro:IPR012971); contains InterPro domain GTP1/OBG; (InterPro:IPR006073) Range:  from: 19741100    to: 19744016    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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