Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <--------ATHB1                                                                       --------->YAB1       <---------AHL20(2)                                              -------->HAHB4   --------->AHL20(2)                                                  <---------ICU4   <---------AHL20(2)                                                 <---------ATHB51  <---------AHL20(2)                                                  <---------ATHB12 ---->ANAC46            <-----------GT1                               --------->ICU4     <-----------GT1 ---->ANAC58      <----------DOF2         <----------DOF2           --------->YAB1<---------AHL20(2)< ---->ANAC58   <---------AHL20(2)      <---------AHL20(2) <---------WOX13(1)    <---------AHL20(2)  -   gaaaattattttcttattttcttttaaaaccattttcttattttcttttaaaacttcttaattgatgaactaataattctatattttttttatacttctt  19719700                                             <--------ATHB1                                             --------->YAB1                                             <---------ICU4                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       --------->YAB1            <--------HAHB4            <---------YAB1            <---------ICU4          --------->YAB1            --------->YAB1         <---------YAB1           <------ZmHOX2a(2)    <---------AHL20(2)                           --------->ARR14(2)           <---------ATHB12    --------->YAB1--------->ATHB51                --------->ARR11(3)    <---------SPL7            <---------YAB1<---------YAB1                   <---------GLK1(2)   <---------REM1(1)         <---------AHL20(2)                              <---------ARR14(2)  <---------------AtSPL8     --------->AHL20(1)                             <------ZmHOX2a(1)  <---------------AtSPL3     --------->AHL20(2)                           <---------TOE1(2) <-------GAMYB   <---------TOE2(3)--------->AHL20(2)                 <------------CBF ---------MYB46(3)          --------->YAB1  --------->ICU4        <------ZmHOX2a(1) -------->MYB52(2)         <---------YAB1 --------->YAB1        --------->MYB59           <---------AHL20(2)   gtttgttgtaccgatcattaagttagaacattataatattataagaataattgttggcagaaaaattaggaaattgtaggattttctctgatttttttgt  19719800                                               <---------YAB1                --------->KAN4(2)                              <---------ARR11(3)                            <----------TaMYB80                              <---------AHL20(1)                            --------->KAN4(1)                  <--------ATHB1              --------->ARR11(3)            <---------KAN4(1)                  <---------ICU4              <---------ARR11(3)           ---------->TaMYB80               --------->YAB1 --------->AHL20(1)            <---------ARR11(3)            --------->YAB1    --------->ARR11(3)            --------->ARR11(3)    ----------->GT1 --------->ICU4<-----------GT1        --------->AHL20(2)<---------KAN4(2)   ttgaaaatgaaaaataagaataattcttagaatatttttcaaacttattatctttggaataaaatcttcaacaagagaatatacctagtattttgttttc  19719900                              --------->YAB1       <-----------GT1                   <---------ATHB12                           <---------ICU4       <---------ICU4                     --------->WOX13(1)                          --------->ICU4  --------->ANAC58                       ------------>CBF                         --------->AHL20(2)------------>CBF                      <-------TEIL                     --------->YAB1       --------->ANAC58              xxxxxxxxxxxxxxxx>smallRNA(i)                    <---------ATHB12    ---------->DOF2               --------->ANAC58                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 --------->ANAC58<xxxxxxxxxxxxxx                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---------GLK1(2)    <---------ANAC58               <------ZmHOX2a(2)<---------YAB1 --------->ICU4  <-----------GT1<---------ANAC58   ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->HSFB2a(2)     <---------ANAC46 ----------->TBP <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    ---------   tctataaaagcacatcgatcccatcataaaaattatcatttacaaagcaatatttactagaattttttcaaaacgaaatgacgttcaatcacttagctta  19720000                                                               <---------AHL20(2)                  --------->STY1(2)                            --------->AHL20(2)                 <xx          --------->DOF5.7(2)                    <xxxxxxxxxxxxxxxxsmallRNA(i)                    <---          <---------MYB52(1)                   <---------ARR14(2)                               -----        xxxxxxxxxxxxxxxx>smallRNA(i)           <-----------ARR10                              -------       ---------->ID1                          --------->GLK1(2)                             ------>NtERF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <xxxxxxxxxxxxxxxxsmallRNA(i)              ------>ZmHOX2a(1)   <---------ANAC58                            --------->ARR14(2)   <-----------HVH21 ------>ZmHOX2a(1)   <---------ANAC58                           <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ANAC58  ------>NtERF2 xxsmallRNA(i)   --------->ANAC58           <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ANAC58  <-------- >At4g35610      --------->ANAC58          <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->ANAC46<---------LBD16   agcatccttgtcgttagccaagctagagtcaccagtacccatgtccgagtatctgagccatctaaaaaaatgtcactcgaaacatttcctcctccggccg  19720100                       <-----------GT1                ----------->GT1                --------->ANAC58                --------->ANAC58                --------->ANAC55(1)                --------->ANAC55(2)                --------->ANAC46          ------>ZmHOX2a(1)     ------->GAMYB   --------->ICU4                                   --------->ATHB12  <-----------GT1 --------->AHL20(2)                                  --------->ATHB51 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                <--------ATHB1 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                    <---------ICU4 <---------ICU4 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                 --------->ICU4 --------->ICU4 xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <---------ICU4           <---------YAB1 ----GAMYB--------->LBD16               <---------AHL20(2)<---------AHL20(2) ------>GT1     <---------ANAC55(2)    --------->AHL20(2)<---------YAB1 -->SPL7----------->RAV1(2)    <-----------GT1       --------->ANAC55(2)                      <------ -SPL7xxxxxxxxxxxxxxxx>smallRNA(i)<----------DOF2  <-----------GT1 --------->YAB1            --------   gttataacgctcctgaacaagtaattttcaatttttctttataaaatcattttttacttattatttgtagaataattggattgtatgccctaaatttaac  19720200                                                          --------->AHL20(2)                                                      <---------YAB1                                                     <---------AHL20(1)                   --------->AHL20(1)                                                     <---------AHL20(2)                   --------->AHL20(2)                           --------->AHL20(2)      <---------YAB1                         <---------AHL20(2)                           <---------AHL20(2)    -------->HAHB4                          --------->AHL20(2)                       --------->AHL20(2)        <--------HAHB4                      --------->AHL20(2)                       <---------AHL20(2)        <---------AHL20(2)                  <---------AHL20(2)                   <---------YAB1                <---------ICU4                  --------->AHL20(2)              --------->ZAT6                     --------->YAB1                  <---------AHL20(2)             --------->ZAT14                     -------->ATHB1                  --------->AHL20(1)             <---------ZAT14                     --------->ATHB51                <---------AHL20(1)             <---------ZAT18                    <---------ATHB12              <--------HAHB4         --------------->AtSPL8                 --------->ICU4                <---------ICU4   --------->CCA1(2)--------->YAB1              <---------ATHB51              --------->ATHB51      - xxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------ARR11(3)                 --------->ICU4   <------ -----GT1<---------------AtSPL8          <---------CCA1(2)<---------AHL20(2) <---------YAB1   ------- ->AHL20(2)  --------->ZAT18<---------AHL20(2)  <---------YAB1             --------->YAB1<---------AHL20(2)   tagagatttgagatgtacactataattttttaaattttgtgatatatctaattattatttttaaatgacatttttgctcataattaattaaaaaaattaa  19720300                        <---------AHL20(2)                        --------->AHL20(2)                    <---------AHL20(2)                    --------->AHL20(2)                                         --------->AHL20(1)            <---------AHL20(2)                                                 <---------AHL20(1)           --------->AHL20(2)                   --------->GLK1(2)              <---------AHL20(2)           <---------AHL20(2)                   <---------ARR11(3)            <---------AHL20(2)          <---------AHL20(1)<---------ICU4  <---------AHL20(2)            --------->AHL20(2)       --------->AHL20(2) <---------TOE2(3)--------->AHL20(2) --------->YAB1  --------->AHL20(2)   ------->TEIL    <---------WOX13(1)     <---------YAB1      --------->AHL20(2) ---------->GT1 <---------YAB1         <---------AHL20(2)    <---------YAB1   --------->YAB1 ---AHL20(2)--------->AHL20(1)         <---------YAB1   --------->ZAT6    <---------AHL20(2) -->AHL20(2)--------->AHL20(2) <-----------GT1  --------->ARR11(3)  --------->ANAC46   aaatgtatataaaataatttgattaattaatatttacaaatattattaaaaatctaaaacactattatatactcaaaaaattatattttgttttgagaaa  19720400                                             <---------ICU4                                            <---------AHL20(2)                                            --------->AHL20(2)                                           <---------YAB1                                         <---------ICU4                                        <---------ATHB51                                        --------->ICU4                                     <---------AHL20(1)                                     --------->AHL20(1)                                     <---------AHL20(2)         --------->YAB1              --------->AHL20(2)         -------->HAHB4             --------->AHL20(2)                                  <--------ATHB1        <---------YAB1         --------->ANAC58    --------->TOE1(3)                    --------->ATHB12        --------->ICU4         --------->ANAC46    --------->TOE2(3)                    -------->HAHB4      <---------ICU4           --------->ANAC58 <-----------GT1                        <---------YAB1      --------->YAB1           --------->ANAC55(2)<---------ANAC55(2)                  --------->ICU4     <---------AHL20(2)        <---------ANAC55(2)----------->RAV1(2)     --------->ARR11(3)       --     <---------ATHB51     <---------ICU4<---------AHL20(2)                <---------ARR11(3)      --- <---------AHL20(2)    --------->MYB52(1)-------->ATHB1              ----------->GT1 --------->YAB1<- --------->AHL20(2)  <---------MYB52(2) --------->AHL20(2)  ----------->GT1  <----------DOF2     <---   attttaaataatgataaactaaaactaacaattacgaaataaattattaattacctgaacttgggttaatttagtaaatcttttggataatgattcacta  19720500                      <---------AHL20(2)                      --------->AHL20(2)                      <---------AHL20(1)                                                    ---------                      --------->AHL20(1)                                --------->ZAT6      ---------                  --------->AHL20(2)                                    <-----------GT1     <--------                 <---------AHL20(2)                                   <-----------GT1      <---------AHL20(2)       <---------AHL20(2)      <----------DOF2                     <---------ICU4          --------->AHL20(2)       --------->AHL20(2)<---------YAB1                           <---------YAB1        --------->AHL20(2) ------->At5g28300<---------AHL20(2)                              --------->AHL20(2)    <---------AHL20(2) -------->GT1    --------->AHL20(2)                               <---------AHL20(2)   --------->AHL20(2) ------GAMYB     --------->AHL20(1)                            ------->TEIL            <---------AHL20(2) ------TOE2(3)   <---------AHL20(1)  --------->TOE2(3)      ----------->GT1     <---------YAB1    <--   cggttatatataattcaaatttattttattaatctttttcattaacaaatgttttgagagacatgtatataattacactattttgatttttaaattaatt  19720600  Previous    Next  AGI:  At1g52940.1    Description:  ATPAP5/PAP5 (purple acid phosphatase 5); acid phosphatase/ protein serine/threonine phosphatase. similar to ATPAP11/PAP11 (PURPLE ACID PHOSPHATASE 11), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G18130.1); similar to purple acid phosphatase [Ipomoea batatas] (GB:CAA06921.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Purple acid phosphatase-like, N-terminal; (InterPro:IPR008963); contains InterPro domain Purple acid phosphatase, N-terminal; (InterPro:IPR015914) Range:  from: 19720070    to: 19727393    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version